Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02147

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02146 and MPMX20_02147 overlap by 4 nucleotidesMPMX20_02147 and MPMX20_02148 are separated by 2 nucleotidesMPMX20_02148 and MPMX20_02149 are separated by 1 nucleotides MPMX20_02146: MPMX20_02146 - 1,2-phenylacetyl-CoA epoxidase, subunit E, at 2,238,386 to 2,239,456 _02146 MPMX20_02147: MPMX20_02147 - 2,3-dehydroadipyl-CoA hydratase, at 2,239,453 to 2,240,220 _02147 MPMX20_02148: MPMX20_02148 - 1,2-epoxyphenylacetyl-CoA isomerase, at 2,240,223 to 2,241,008 _02148 MPMX20_02149: MPMX20_02149 - 3-hydroxyadipyl-CoA dehydrogenase, at 2,241,010 to 2,242,437 _02149 Position (kb) 2239 2240 2241Strain fitness (log2 ratio) -2 -1 0 1at 2238.463 kb on + strandat 2238.463 kb on + strandat 2238.471 kb on - strandat 2238.506 kb on + strand, within MPMX20_02146at 2238.570 kb on + strand, within MPMX20_02146at 2238.589 kb on - strand, within MPMX20_02146at 2238.594 kb on - strand, within MPMX20_02146at 2238.669 kb on + strand, within MPMX20_02146at 2238.753 kb on + strand, within MPMX20_02146at 2238.759 kb on + strand, within MPMX20_02146at 2238.792 kb on + strand, within MPMX20_02146at 2238.820 kb on + strand, within MPMX20_02146at 2238.820 kb on + strand, within MPMX20_02146at 2238.828 kb on - strand, within MPMX20_02146at 2238.844 kb on + strand, within MPMX20_02146at 2238.921 kb on + strand, within MPMX20_02146at 2238.921 kb on + strand, within MPMX20_02146at 2238.929 kb on + strand, within MPMX20_02146at 2238.929 kb on - strand, within MPMX20_02146at 2239.024 kb on - strand, within MPMX20_02146at 2239.030 kb on - strand, within MPMX20_02146at 2239.076 kb on + strand, within MPMX20_02146at 2239.130 kb on - strand, within MPMX20_02146at 2239.278 kb on - strand, within MPMX20_02146at 2239.278 kb on - strand, within MPMX20_02146at 2239.298 kb on - strand, within MPMX20_02146at 2239.353 kb on + strandat 2239.353 kb on + strandat 2239.361 kb on - strandat 2239.361 kb on - strandat 2239.380 kb on + strandat 2239.400 kb on - strandat 2239.413 kb on + strandat 2239.473 kb on - strandat 2239.536 kb on + strand, within MPMX20_02147at 2239.611 kb on + strand, within MPMX20_02147at 2239.633 kb on - strand, within MPMX20_02147at 2239.650 kb on - strand, within MPMX20_02147at 2239.788 kb on + strand, within MPMX20_02147at 2239.788 kb on + strand, within MPMX20_02147at 2239.935 kb on + strand, within MPMX20_02147at 2239.937 kb on + strand, within MPMX20_02147at 2239.969 kb on - strand, within MPMX20_02147at 2239.979 kb on - strand, within MPMX20_02147at 2239.983 kb on + strand, within MPMX20_02147at 2240.037 kb on - strand, within MPMX20_02147at 2240.048 kb on - strand, within MPMX20_02147at 2240.116 kb on + strand, within MPMX20_02147at 2240.116 kb on + strand, within MPMX20_02147at 2240.116 kb on + strand, within MPMX20_02147at 2240.124 kb on - strand, within MPMX20_02147at 2240.130 kb on + strand, within MPMX20_02147at 2240.142 kb on + strand, within MPMX20_02147at 2240.160 kb on - strandat 2240.271 kb on - strandat 2240.276 kb on - strandat 2240.359 kb on - strand, within MPMX20_02148at 2240.563 kb on - strand, within MPMX20_02148at 2240.568 kb on - strand, within MPMX20_02148at 2240.596 kb on - strand, within MPMX20_02148at 2240.622 kb on + strand, within MPMX20_02148at 2240.664 kb on - strand, within MPMX20_02148at 2240.706 kb on - strand, within MPMX20_02148at 2240.711 kb on - strand, within MPMX20_02148at 2240.741 kb on + strand, within MPMX20_02148at 2240.761 kb on + strand, within MPMX20_02148at 2240.768 kb on + strand, within MPMX20_02148at 2240.812 kb on - strand, within MPMX20_02148at 2240.836 kb on + strand, within MPMX20_02148at 2240.839 kb on - strand, within MPMX20_02148at 2240.844 kb on - strand, within MPMX20_02148at 2240.844 kb on - strand, within MPMX20_02148at 2240.844 kb on - strand, within MPMX20_02148at 2240.887 kb on - strand, within MPMX20_02148at 2240.960 kb on + strandat 2240.976 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,238,463 + -2.1
2,238,463 + -2.1
2,238,471 - -0.5
2,238,506 + MPMX20_02146 0.11 -0.5
2,238,570 + MPMX20_02146 0.17 -0.9
2,238,589 - MPMX20_02146 0.19 -2.3
2,238,594 - MPMX20_02146 0.19 -2.4
2,238,669 + MPMX20_02146 0.26 +0.1
2,238,753 + MPMX20_02146 0.34 -1.5
2,238,759 + MPMX20_02146 0.35 -1.3
2,238,792 + MPMX20_02146 0.38 -1.0
2,238,820 + MPMX20_02146 0.41 -0.1
2,238,820 + MPMX20_02146 0.41 -0.8
2,238,828 - MPMX20_02146 0.41 +1.5
2,238,844 + MPMX20_02146 0.43 -0.2
2,238,921 + MPMX20_02146 0.50 -1.6
2,238,921 + MPMX20_02146 0.50 -0.8
2,238,929 + MPMX20_02146 0.51 +0.3
2,238,929 - MPMX20_02146 0.51 -1.2
2,239,024 - MPMX20_02146 0.60 -1.2
2,239,030 - MPMX20_02146 0.60 -1.5
2,239,076 + MPMX20_02146 0.64 -1.6
2,239,130 - MPMX20_02146 0.69 +1.7
2,239,278 - MPMX20_02146 0.83 +0.2
2,239,278 - MPMX20_02146 0.83 -0.3
2,239,298 - MPMX20_02146 0.85 +0.2
2,239,353 + -1.2
2,239,353 + +0.4
2,239,361 - -1.7
2,239,361 - +0.4
2,239,380 + -1.7
2,239,400 - -1.7
2,239,413 + +1.7
2,239,473 - -1.0
2,239,536 + MPMX20_02147 0.11 -1.0
2,239,611 + MPMX20_02147 0.21 -0.1
2,239,633 - MPMX20_02147 0.23 -1.1
2,239,650 - MPMX20_02147 0.26 -0.5
2,239,788 + MPMX20_02147 0.44 +0.7
2,239,788 + MPMX20_02147 0.44 -1.9
2,239,935 + MPMX20_02147 0.63 +0.1
2,239,937 + MPMX20_02147 0.63 -1.5
2,239,969 - MPMX20_02147 0.67 -2.0
2,239,979 - MPMX20_02147 0.68 -1.5
2,239,983 + MPMX20_02147 0.69 -1.4
2,240,037 - MPMX20_02147 0.76 -1.2
2,240,048 - MPMX20_02147 0.77 -2.2
2,240,116 + MPMX20_02147 0.86 -1.7
2,240,116 + MPMX20_02147 0.86 -2.7
2,240,116 + MPMX20_02147 0.86 -1.8
2,240,124 - MPMX20_02147 0.87 -0.8
2,240,130 + MPMX20_02147 0.88 -2.0
2,240,142 + MPMX20_02147 0.90 -2.4
2,240,160 - +0.1
2,240,271 - +1.3
2,240,276 - -1.6
2,240,359 - MPMX20_02148 0.17 -0.3
2,240,563 - MPMX20_02148 0.43 -0.1
2,240,568 - MPMX20_02148 0.44 -1.1
2,240,596 - MPMX20_02148 0.47 -0.3
2,240,622 + MPMX20_02148 0.51 -0.1
2,240,664 - MPMX20_02148 0.56 +0.0
2,240,706 - MPMX20_02148 0.61 -1.0
2,240,711 - MPMX20_02148 0.62 -0.4
2,240,741 + MPMX20_02148 0.66 -0.2
2,240,761 + MPMX20_02148 0.68 -1.0
2,240,768 + MPMX20_02148 0.69 -0.2
2,240,812 - MPMX20_02148 0.75 +1.1
2,240,836 + MPMX20_02148 0.78 -1.6
2,240,839 - MPMX20_02148 0.78 +0.6
2,240,844 - MPMX20_02148 0.79 +0.1
2,240,844 - MPMX20_02148 0.79 -1.6
2,240,844 - MPMX20_02148 0.79 -1.2
2,240,887 - MPMX20_02148 0.84 +0.5
2,240,960 + -1.9
2,240,976 + -0.9

Or see this region's nucleotide sequence