Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02075

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02074 and MPMX20_02075 are separated by 17 nucleotidesMPMX20_02075 and MPMX20_02076 overlap by 4 nucleotidesMPMX20_02076 and MPMX20_02077 are separated by 4 nucleotides MPMX20_02074: MPMX20_02074 - hypothetical protein, at 2,166,913 to 2,167,971 _02074 MPMX20_02075: MPMX20_02075 - hypothetical protein, at 2,167,989 to 2,168,804 _02075 MPMX20_02076: MPMX20_02076 - Bicarbonate transport ATP-binding protein CmpD, at 2,168,801 to 2,169,577 _02076 MPMX20_02077: MPMX20_02077 - hypothetical protein, at 2,169,582 to 2,170,298 _02077 Position (kb) 2167 2168 2169Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 2167.140 kb on + strand, within MPMX20_02074at 2167.140 kb on + strand, within MPMX20_02074at 2167.143 kb on + strand, within MPMX20_02074at 2167.146 kb on - strand, within MPMX20_02074at 2167.148 kb on + strand, within MPMX20_02074at 2167.171 kb on + strand, within MPMX20_02074at 2167.189 kb on - strand, within MPMX20_02074at 2167.233 kb on + strand, within MPMX20_02074at 2167.236 kb on - strand, within MPMX20_02074at 2167.236 kb on - strand, within MPMX20_02074at 2167.247 kb on + strand, within MPMX20_02074at 2167.359 kb on - strand, within MPMX20_02074at 2167.458 kb on + strand, within MPMX20_02074at 2167.458 kb on + strand, within MPMX20_02074at 2167.466 kb on - strand, within MPMX20_02074at 2167.544 kb on - strand, within MPMX20_02074at 2167.544 kb on - strand, within MPMX20_02074at 2167.564 kb on + strand, within MPMX20_02074at 2167.609 kb on + strand, within MPMX20_02074at 2167.609 kb on + strand, within MPMX20_02074at 2167.609 kb on + strand, within MPMX20_02074at 2167.609 kb on + strand, within MPMX20_02074at 2167.617 kb on - strand, within MPMX20_02074at 2167.617 kb on - strand, within MPMX20_02074at 2167.709 kb on + strand, within MPMX20_02074at 2167.730 kb on + strand, within MPMX20_02074at 2167.730 kb on - strand, within MPMX20_02074at 2167.730 kb on - strand, within MPMX20_02074at 2167.740 kb on + strand, within MPMX20_02074at 2167.740 kb on + strand, within MPMX20_02074at 2167.740 kb on + strand, within MPMX20_02074at 2167.740 kb on + strand, within MPMX20_02074at 2167.748 kb on - strand, within MPMX20_02074at 2167.748 kb on - strand, within MPMX20_02074at 2167.748 kb on - strand, within MPMX20_02074at 2167.748 kb on - strand, within MPMX20_02074at 2167.803 kb on + strand, within MPMX20_02074at 2167.870 kb on + strandat 2167.897 kb on - strandat 2167.902 kb on - strandat 2167.903 kb on + strandat 2167.908 kb on - strandat 2167.992 kb on - strandat 2168.054 kb on - strandat 2168.092 kb on + strand, within MPMX20_02075at 2168.092 kb on + strand, within MPMX20_02075at 2168.165 kb on - strand, within MPMX20_02075at 2168.183 kb on - strand, within MPMX20_02075at 2168.193 kb on - strand, within MPMX20_02075at 2168.198 kb on + strand, within MPMX20_02075at 2168.206 kb on - strand, within MPMX20_02075at 2168.211 kb on - strand, within MPMX20_02075at 2168.221 kb on + strand, within MPMX20_02075at 2168.224 kb on - strand, within MPMX20_02075at 2168.228 kb on - strand, within MPMX20_02075at 2168.253 kb on + strand, within MPMX20_02075at 2168.266 kb on + strand, within MPMX20_02075at 2168.402 kb on + strand, within MPMX20_02075at 2168.410 kb on - strand, within MPMX20_02075at 2168.452 kb on + strand, within MPMX20_02075at 2168.460 kb on - strand, within MPMX20_02075at 2168.521 kb on + strand, within MPMX20_02075at 2168.526 kb on + strand, within MPMX20_02075at 2168.537 kb on - strand, within MPMX20_02075at 2168.563 kb on - strand, within MPMX20_02075at 2168.647 kb on + strand, within MPMX20_02075at 2168.654 kb on - strand, within MPMX20_02075at 2168.691 kb on + strand, within MPMX20_02075at 2168.716 kb on + strand, within MPMX20_02075at 2168.849 kb on - strandat 2168.852 kb on + strandat 2168.852 kb on + strandat 2168.870 kb on - strandat 2168.875 kb on + strandat 2168.903 kb on - strand, within MPMX20_02076at 2168.996 kb on - strand, within MPMX20_02076at 2169.008 kb on + strand, within MPMX20_02076at 2169.213 kb on - strand, within MPMX20_02076at 2169.242 kb on + strand, within MPMX20_02076at 2169.250 kb on - strand, within MPMX20_02076at 2169.259 kb on + strand, within MPMX20_02076at 2169.272 kb on - strand, within MPMX20_02076at 2169.308 kb on + strand, within MPMX20_02076at 2169.309 kb on + strand, within MPMX20_02076at 2169.309 kb on + strand, within MPMX20_02076at 2169.313 kb on + strand, within MPMX20_02076at 2169.340 kb on - strand, within MPMX20_02076at 2169.363 kb on - strand, within MPMX20_02076at 2169.411 kb on + strand, within MPMX20_02076at 2169.411 kb on + strand, within MPMX20_02076at 2169.418 kb on - strand, within MPMX20_02076at 2169.419 kb on - strand, within MPMX20_02076at 2169.477 kb on - strand, within MPMX20_02076at 2169.485 kb on - strand, within MPMX20_02076at 2169.530 kb on + strandat 2169.543 kb on - strandat 2169.543 kb on - strandat 2169.543 kb on - strandat 2169.572 kb on + strandat 2169.577 kb on + strandat 2169.620 kb on - strandat 2169.632 kb on + strandat 2169.632 kb on + strandat 2169.655 kb on + strand, within MPMX20_02077at 2169.665 kb on + strand, within MPMX20_02077at 2169.685 kb on - strand, within MPMX20_02077at 2169.730 kb on - strand, within MPMX20_02077at 2169.746 kb on + strand, within MPMX20_02077at 2169.770 kb on - strand, within MPMX20_02077at 2169.770 kb on - strand, within MPMX20_02077

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,167,140 + MPMX20_02074 0.21 -0.1
2,167,140 + MPMX20_02074 0.21 -1.6
2,167,143 + MPMX20_02074 0.22 +1.5
2,167,146 - MPMX20_02074 0.22 +0.9
2,167,148 + MPMX20_02074 0.22 -1.1
2,167,171 + MPMX20_02074 0.24 +1.1
2,167,189 - MPMX20_02074 0.26 -1.2
2,167,233 + MPMX20_02074 0.30 -1.7
2,167,236 - MPMX20_02074 0.31 +0.2
2,167,236 - MPMX20_02074 0.31 -1.9
2,167,247 + MPMX20_02074 0.32 -0.5
2,167,359 - MPMX20_02074 0.42 -1.2
2,167,458 + MPMX20_02074 0.51 +0.7
2,167,458 + MPMX20_02074 0.51 +0.4
2,167,466 - MPMX20_02074 0.52 +0.5
2,167,544 - MPMX20_02074 0.60 -0.5
2,167,544 - MPMX20_02074 0.60 -1.2
2,167,564 + MPMX20_02074 0.61 -2.8
2,167,609 + MPMX20_02074 0.66 -0.8
2,167,609 + MPMX20_02074 0.66 -0.2
2,167,609 + MPMX20_02074 0.66 -0.4
2,167,609 + MPMX20_02074 0.66 -1.2
2,167,617 - MPMX20_02074 0.66 -0.1
2,167,617 - MPMX20_02074 0.66 +0.1
2,167,709 + MPMX20_02074 0.75 -1.6
2,167,730 + MPMX20_02074 0.77 -0.1
2,167,730 - MPMX20_02074 0.77 -1.0
2,167,730 - MPMX20_02074 0.77 -1.8
2,167,740 + MPMX20_02074 0.78 -0.6
2,167,740 + MPMX20_02074 0.78 +0.1
2,167,740 + MPMX20_02074 0.78 +0.6
2,167,740 + MPMX20_02074 0.78 +0.7
2,167,748 - MPMX20_02074 0.79 -0.4
2,167,748 - MPMX20_02074 0.79 -0.3
2,167,748 - MPMX20_02074 0.79 +0.6
2,167,748 - MPMX20_02074 0.79 -1.7
2,167,803 + MPMX20_02074 0.84 +1.0
2,167,870 + +0.1
2,167,897 - +0.5
2,167,902 - +3.6
2,167,903 + +0.1
2,167,908 - -0.3
2,167,992 - +0.6
2,168,054 - +0.0
2,168,092 + MPMX20_02075 0.13 -0.4
2,168,092 + MPMX20_02075 0.13 -1.3
2,168,165 - MPMX20_02075 0.22 -0.2
2,168,183 - MPMX20_02075 0.24 -1.8
2,168,193 - MPMX20_02075 0.25 -0.6
2,168,198 + MPMX20_02075 0.26 -0.7
2,168,206 - MPMX20_02075 0.27 -0.5
2,168,211 - MPMX20_02075 0.27 +8.0
2,168,221 + MPMX20_02075 0.28 -0.0
2,168,224 - MPMX20_02075 0.29 -0.7
2,168,228 - MPMX20_02075 0.29 +0.3
2,168,253 + MPMX20_02075 0.32 -2.7
2,168,266 + MPMX20_02075 0.34 +1.4
2,168,402 + MPMX20_02075 0.51 +1.1
2,168,410 - MPMX20_02075 0.52 -0.6
2,168,452 + MPMX20_02075 0.57 -0.5
2,168,460 - MPMX20_02075 0.58 +0.6
2,168,521 + MPMX20_02075 0.65 -0.2
2,168,526 + MPMX20_02075 0.66 -0.7
2,168,537 - MPMX20_02075 0.67 +1.8
2,168,563 - MPMX20_02075 0.70 -0.1
2,168,647 + MPMX20_02075 0.81 +0.2
2,168,654 - MPMX20_02075 0.81 +1.3
2,168,691 + MPMX20_02075 0.86 +0.4
2,168,716 + MPMX20_02075 0.89 -0.9
2,168,849 - -1.1
2,168,852 + -0.6
2,168,852 + -1.2
2,168,870 - +0.2
2,168,875 + +2.3
2,168,903 - MPMX20_02076 0.13 -1.0
2,168,996 - MPMX20_02076 0.25 -0.6
2,169,008 + MPMX20_02076 0.27 -1.0
2,169,213 - MPMX20_02076 0.53 +0.4
2,169,242 + MPMX20_02076 0.57 +0.1
2,169,250 - MPMX20_02076 0.58 +0.6
2,169,259 + MPMX20_02076 0.59 -1.6
2,169,272 - MPMX20_02076 0.61 -0.1
2,169,308 + MPMX20_02076 0.65 -1.3
2,169,309 + MPMX20_02076 0.65 -1.8
2,169,309 + MPMX20_02076 0.65 +0.4
2,169,313 + MPMX20_02076 0.66 +0.5
2,169,340 - MPMX20_02076 0.69 +0.0
2,169,363 - MPMX20_02076 0.72 +1.1
2,169,411 + MPMX20_02076 0.79 -0.4
2,169,411 + MPMX20_02076 0.79 -1.4
2,169,418 - MPMX20_02076 0.79 -0.8
2,169,419 - MPMX20_02076 0.80 -2.3
2,169,477 - MPMX20_02076 0.87 +0.5
2,169,485 - MPMX20_02076 0.88 -1.2
2,169,530 + +0.4
2,169,543 - -1.2
2,169,543 - +0.4
2,169,543 - -1.3
2,169,572 + -0.2
2,169,577 + +0.8
2,169,620 - +0.7
2,169,632 + -1.1
2,169,632 + +1.7
2,169,655 + MPMX20_02077 0.10 -0.0
2,169,665 + MPMX20_02077 0.12 -0.3
2,169,685 - MPMX20_02077 0.14 +0.1
2,169,730 - MPMX20_02077 0.21 -1.0
2,169,746 + MPMX20_02077 0.23 +1.1
2,169,770 - MPMX20_02077 0.26 +0.0
2,169,770 - MPMX20_02077 0.26 -1.7

Or see this region's nucleotide sequence