Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02021

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02020 and MPMX20_02021 are separated by 197 nucleotidesMPMX20_02021 and MPMX20_02022 are separated by 137 nucleotides MPMX20_02020: MPMX20_02020 - Mannose-6-phosphate isomerase, at 2,110,821 to 2,111,996 _02020 MPMX20_02021: MPMX20_02021 - Fumarate hydratase class I, aerobic, at 2,112,194 to 2,113,840 _02021 MPMX20_02022: MPMX20_02022 - Fumarate hydratase class II, at 2,113,978 to 2,115,372 _02022 Position (kb) 2112 2113 2114Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2111.210 kb on + strand, within MPMX20_02020at 2111.256 kb on - strand, within MPMX20_02020at 2111.269 kb on + strand, within MPMX20_02020at 2111.278 kb on - strand, within MPMX20_02020at 2111.289 kb on + strand, within MPMX20_02020at 2111.299 kb on + strand, within MPMX20_02020at 2111.299 kb on + strand, within MPMX20_02020at 2111.307 kb on - strand, within MPMX20_02020at 2111.307 kb on - strand, within MPMX20_02020at 2111.386 kb on + strand, within MPMX20_02020at 2111.451 kb on - strand, within MPMX20_02020at 2111.461 kb on - strand, within MPMX20_02020at 2111.580 kb on - strand, within MPMX20_02020at 2111.597 kb on - strand, within MPMX20_02020at 2111.609 kb on - strand, within MPMX20_02020at 2111.663 kb on + strand, within MPMX20_02020at 2111.681 kb on - strand, within MPMX20_02020at 2111.681 kb on - strand, within MPMX20_02020at 2111.703 kb on + strand, within MPMX20_02020at 2111.711 kb on - strand, within MPMX20_02020at 2111.728 kb on + strand, within MPMX20_02020at 2111.737 kb on + strand, within MPMX20_02020at 2111.738 kb on - strand, within MPMX20_02020at 2111.745 kb on - strand, within MPMX20_02020at 2111.835 kb on - strand, within MPMX20_02020at 2111.835 kb on - strand, within MPMX20_02020at 2111.874 kb on - strand, within MPMX20_02020at 2111.906 kb on + strandat 2111.916 kb on + strandat 2111.926 kb on + strandat 2111.955 kb on + strandat 2111.967 kb on + strandat 2111.969 kb on - strandat 2111.975 kb on - strandat 2111.975 kb on - strandat 2111.977 kb on + strandat 2111.977 kb on + strandat 2111.979 kb on + strandat 2111.979 kb on + strandat 2111.998 kb on + strandat 2111.998 kb on + strandat 2112.056 kb on + strandat 2112.056 kb on + strandat 2112.056 kb on + strandat 2112.064 kb on - strandat 2112.116 kb on + strandat 2112.123 kb on - strandat 2112.131 kb on + strandat 2112.154 kb on - strandat 2112.169 kb on + strandat 2112.197 kb on - strandat 2112.243 kb on - strandat 2112.318 kb on - strandat 2112.323 kb on - strandat 2112.337 kb on - strandat 2112.377 kb on - strand, within MPMX20_02021at 2112.418 kb on - strand, within MPMX20_02021at 2112.460 kb on - strand, within MPMX20_02021at 2112.553 kb on + strand, within MPMX20_02021at 2112.594 kb on - strand, within MPMX20_02021at 2112.664 kb on + strand, within MPMX20_02021at 2112.682 kb on - strand, within MPMX20_02021at 2112.706 kb on - strand, within MPMX20_02021at 2112.706 kb on - strand, within MPMX20_02021at 2112.706 kb on - strand, within MPMX20_02021at 2112.799 kb on + strand, within MPMX20_02021at 2112.828 kb on - strand, within MPMX20_02021at 2112.900 kb on + strand, within MPMX20_02021at 2113.139 kb on - strand, within MPMX20_02021at 2113.149 kb on - strand, within MPMX20_02021at 2113.220 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.277 kb on + strand, within MPMX20_02021at 2113.285 kb on - strand, within MPMX20_02021at 2113.510 kb on - strand, within MPMX20_02021at 2113.543 kb on + strand, within MPMX20_02021at 2113.570 kb on - strand, within MPMX20_02021at 2113.629 kb on + strand, within MPMX20_02021at 2113.637 kb on - strand, within MPMX20_02021at 2113.683 kb on - strandat 2113.697 kb on - strandat 2113.760 kb on + strandat 2113.804 kb on + strandat 2113.931 kb on - strandat 2113.966 kb on - strandat 2113.966 kb on - strandat 2113.990 kb on - strandat 2114.012 kb on - strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.037 kb on + strandat 2114.045 kb on - strandat 2114.045 kb on - strandat 2114.045 kb on - strandat 2114.127 kb on + strand, within MPMX20_02022at 2114.135 kb on - strand, within MPMX20_02022at 2114.215 kb on + strand, within MPMX20_02022at 2114.328 kb on + strand, within MPMX20_02022at 2114.328 kb on + strand, within MPMX20_02022at 2114.365 kb on - strand, within MPMX20_02022at 2114.474 kb on - strand, within MPMX20_02022at 2114.486 kb on + strand, within MPMX20_02022at 2114.528 kb on - strand, within MPMX20_02022at 2114.534 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.797 kb on - strand, within MPMX20_02022at 2114.815 kb on + strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,111,210 + MPMX20_02020 0.33 -1.9
2,111,256 - MPMX20_02020 0.37 -1.5
2,111,269 + MPMX20_02020 0.38 -1.0
2,111,278 - MPMX20_02020 0.39 -1.8
2,111,289 + MPMX20_02020 0.40 -1.5
2,111,299 + MPMX20_02020 0.41 -3.0
2,111,299 + MPMX20_02020 0.41 -3.3
2,111,307 - MPMX20_02020 0.41 -1.5
2,111,307 - MPMX20_02020 0.41 -0.8
2,111,386 + MPMX20_02020 0.48 -1.5
2,111,451 - MPMX20_02020 0.54 -1.4
2,111,461 - MPMX20_02020 0.54 -4.0
2,111,580 - MPMX20_02020 0.65 -1.7
2,111,597 - MPMX20_02020 0.66 -2.0
2,111,609 - MPMX20_02020 0.67 -2.3
2,111,663 + MPMX20_02020 0.72 -2.4
2,111,681 - MPMX20_02020 0.73 -1.6
2,111,681 - MPMX20_02020 0.73 -2.1
2,111,703 + MPMX20_02020 0.75 -0.8
2,111,711 - MPMX20_02020 0.76 -3.0
2,111,728 + MPMX20_02020 0.77 -1.4
2,111,737 + MPMX20_02020 0.78 +0.8
2,111,738 - MPMX20_02020 0.78 -1.8
2,111,745 - MPMX20_02020 0.79 -3.7
2,111,835 - MPMX20_02020 0.86 +0.1
2,111,835 - MPMX20_02020 0.86 -1.8
2,111,874 - MPMX20_02020 0.90 -0.9
2,111,906 + +1.1
2,111,916 + -2.7
2,111,926 + +3.5
2,111,955 + -2.0
2,111,967 + -1.1
2,111,969 - -2.0
2,111,975 - -2.8
2,111,975 - +0.4
2,111,977 + -0.1
2,111,977 + +0.3
2,111,979 + -1.3
2,111,979 + +0.7
2,111,998 + -1.0
2,111,998 + -0.3
2,112,056 + +0.9
2,112,056 + +0.7
2,112,056 + -0.4
2,112,064 - -1.1
2,112,116 + +0.4
2,112,123 - -0.5
2,112,131 + +1.5
2,112,154 - -1.2
2,112,169 + -2.3
2,112,197 - -1.3
2,112,243 - +0.4
2,112,318 - +0.5
2,112,323 - +0.0
2,112,337 - -0.9
2,112,377 - MPMX20_02021 0.11 -0.4
2,112,418 - MPMX20_02021 0.14 +0.7
2,112,460 - MPMX20_02021 0.16 -3.1
2,112,553 + MPMX20_02021 0.22 -2.0
2,112,594 - MPMX20_02021 0.24 -0.3
2,112,664 + MPMX20_02021 0.29 -1.9
2,112,682 - MPMX20_02021 0.30 +0.7
2,112,706 - MPMX20_02021 0.31 -2.1
2,112,706 - MPMX20_02021 0.31 -2.5
2,112,706 - MPMX20_02021 0.31 +0.1
2,112,799 + MPMX20_02021 0.37 -1.9
2,112,828 - MPMX20_02021 0.38 +0.5
2,112,900 + MPMX20_02021 0.43 -0.5
2,113,139 - MPMX20_02021 0.57 -0.3
2,113,149 - MPMX20_02021 0.58 -1.2
2,113,220 + MPMX20_02021 0.62 -2.3
2,113,277 + MPMX20_02021 0.66 -2.2
2,113,277 + MPMX20_02021 0.66 -0.5
2,113,277 + MPMX20_02021 0.66 -0.7
2,113,277 + MPMX20_02021 0.66 -1.6
2,113,277 + MPMX20_02021 0.66 -1.9
2,113,277 + MPMX20_02021 0.66 -1.9
2,113,285 - MPMX20_02021 0.66 -2.2
2,113,510 - MPMX20_02021 0.80 +0.5
2,113,543 + MPMX20_02021 0.82 -2.8
2,113,570 - MPMX20_02021 0.84 -0.5
2,113,629 + MPMX20_02021 0.87 -1.8
2,113,637 - MPMX20_02021 0.88 +1.1
2,113,683 - -1.7
2,113,697 - +0.7
2,113,760 + -0.2
2,113,804 + -1.5
2,113,931 - +1.1
2,113,966 - -2.1
2,113,966 - +2.0
2,113,990 - -1.3
2,114,012 - -0.7
2,114,037 + -2.0
2,114,037 + +0.9
2,114,037 + -0.6
2,114,037 + -0.3
2,114,037 + +2.0
2,114,045 - -0.7
2,114,045 - -0.8
2,114,045 - +0.3
2,114,127 + MPMX20_02022 0.11 -0.8
2,114,135 - MPMX20_02022 0.11 -0.6
2,114,215 + MPMX20_02022 0.17 -1.2
2,114,328 + MPMX20_02022 0.25 +0.2
2,114,328 + MPMX20_02022 0.25 +0.9
2,114,365 - MPMX20_02022 0.28 -1.7
2,114,474 - MPMX20_02022 0.36 -1.0
2,114,486 + MPMX20_02022 0.36 -0.3
2,114,528 - MPMX20_02022 0.39 -0.3
2,114,534 + MPMX20_02022 0.40 +0.4
2,114,680 + MPMX20_02022 0.50 -1.6
2,114,680 + MPMX20_02022 0.50 -1.5
2,114,797 - MPMX20_02022 0.59 +0.2
2,114,815 + MPMX20_02022 0.60 +1.7
2,114,825 - MPMX20_02022 0.61 +0.5
2,114,825 - MPMX20_02022 0.61 -0.1

Or see this region's nucleotide sequence