Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02018

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02017 and MPMX20_02018 are separated by 177 nucleotidesMPMX20_02018 and MPMX20_02019 are separated by 69 nucleotides MPMX20_02017: MPMX20_02017 - PTS system maltose-specific EIICB component, at 2,106,297 to 2,107,889 _02017 MPMX20_02018: MPMX20_02018 - Maltose regulon regulatory protein MalI, at 2,108,067 to 2,109,092 _02018 MPMX20_02019: MPMX20_02019 - Protein YdgA, at 2,109,162 to 2,110,721 _02019 Position (kb) 2108 2109 2110Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2107.098 kb on + strand, within MPMX20_02017at 2107.126 kb on - strand, within MPMX20_02017at 2107.237 kb on + strand, within MPMX20_02017at 2107.250 kb on + strand, within MPMX20_02017at 2107.267 kb on - strand, within MPMX20_02017at 2107.282 kb on + strand, within MPMX20_02017at 2107.282 kb on + strand, within MPMX20_02017at 2107.290 kb on - strand, within MPMX20_02017at 2107.290 kb on - strand, within MPMX20_02017at 2107.308 kb on + strand, within MPMX20_02017at 2107.308 kb on + strand, within MPMX20_02017at 2107.328 kb on + strand, within MPMX20_02017at 2107.328 kb on + strand, within MPMX20_02017at 2107.330 kb on - strand, within MPMX20_02017at 2107.354 kb on + strand, within MPMX20_02017at 2107.362 kb on - strand, within MPMX20_02017at 2107.521 kb on + strand, within MPMX20_02017at 2107.642 kb on + strand, within MPMX20_02017at 2107.723 kb on + strand, within MPMX20_02017at 2107.759 kb on - strandat 2107.759 kb on - strandat 2107.816 kb on - strandat 2107.820 kb on + strandat 2107.820 kb on + strandat 2107.828 kb on - strandat 2107.828 kb on - strandat 2107.884 kb on - strandat 2107.923 kb on - strandat 2107.934 kb on - strandat 2108.063 kb on + strandat 2108.136 kb on - strandat 2108.162 kb on + strandat 2108.241 kb on - strand, within MPMX20_02018at 2108.250 kb on + strand, within MPMX20_02018at 2108.286 kb on - strand, within MPMX20_02018at 2108.434 kb on + strand, within MPMX20_02018at 2108.465 kb on - strand, within MPMX20_02018at 2108.506 kb on + strand, within MPMX20_02018at 2108.561 kb on + strand, within MPMX20_02018at 2108.569 kb on - strand, within MPMX20_02018at 2108.607 kb on + strand, within MPMX20_02018at 2108.671 kb on - strand, within MPMX20_02018at 2108.675 kb on - strand, within MPMX20_02018at 2108.687 kb on + strand, within MPMX20_02018at 2108.752 kb on - strand, within MPMX20_02018at 2108.844 kb on + strand, within MPMX20_02018at 2108.852 kb on - strand, within MPMX20_02018at 2108.852 kb on - strand, within MPMX20_02018at 2108.929 kb on + strand, within MPMX20_02018at 2108.980 kb on - strand, within MPMX20_02018at 2109.003 kb on - strandat 2109.320 kb on - strand, within MPMX20_02019at 2109.338 kb on - strand, within MPMX20_02019at 2109.339 kb on + strand, within MPMX20_02019at 2109.386 kb on - strand, within MPMX20_02019at 2109.415 kb on + strand, within MPMX20_02019at 2109.448 kb on + strand, within MPMX20_02019at 2109.456 kb on - strand, within MPMX20_02019at 2109.504 kb on - strand, within MPMX20_02019at 2109.529 kb on - strand, within MPMX20_02019at 2109.552 kb on + strand, within MPMX20_02019at 2109.552 kb on + strand, within MPMX20_02019at 2109.560 kb on - strand, within MPMX20_02019at 2109.560 kb on - strand, within MPMX20_02019at 2109.560 kb on - strand, within MPMX20_02019at 2109.561 kb on - strand, within MPMX20_02019at 2109.566 kb on - strand, within MPMX20_02019at 2109.602 kb on + strand, within MPMX20_02019at 2109.610 kb on - strand, within MPMX20_02019at 2109.644 kb on + strand, within MPMX20_02019at 2109.652 kb on + strand, within MPMX20_02019at 2109.655 kb on - strand, within MPMX20_02019at 2109.675 kb on - strand, within MPMX20_02019at 2109.675 kb on - strand, within MPMX20_02019at 2109.703 kb on + strand, within MPMX20_02019at 2109.732 kb on + strand, within MPMX20_02019at 2109.753 kb on + strand, within MPMX20_02019at 2109.753 kb on + strand, within MPMX20_02019at 2109.753 kb on + strand, within MPMX20_02019at 2109.761 kb on - strand, within MPMX20_02019at 2109.761 kb on - strand, within MPMX20_02019at 2109.869 kb on - strand, within MPMX20_02019at 2109.879 kb on + strand, within MPMX20_02019at 2109.894 kb on - strand, within MPMX20_02019at 2109.942 kb on - strand, within MPMX20_02019at 2109.947 kb on + strand, within MPMX20_02019at 2109.947 kb on + strand, within MPMX20_02019at 2109.954 kb on - strand, within MPMX20_02019at 2109.967 kb on + strand, within MPMX20_02019

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,107,098 + MPMX20_02017 0.50 +0.3
2,107,126 - MPMX20_02017 0.52 +0.1
2,107,237 + MPMX20_02017 0.59 -2.4
2,107,250 + MPMX20_02017 0.60 +0.4
2,107,267 - MPMX20_02017 0.61 +2.7
2,107,282 + MPMX20_02017 0.62 -2.2
2,107,282 + MPMX20_02017 0.62 -0.2
2,107,290 - MPMX20_02017 0.62 +0.3
2,107,290 - MPMX20_02017 0.62 -0.2
2,107,308 + MPMX20_02017 0.63 +1.4
2,107,308 + MPMX20_02017 0.63 -0.5
2,107,328 + MPMX20_02017 0.65 -0.8
2,107,328 + MPMX20_02017 0.65 -2.0
2,107,330 - MPMX20_02017 0.65 -1.4
2,107,354 + MPMX20_02017 0.66 -0.6
2,107,362 - MPMX20_02017 0.67 -1.7
2,107,521 + MPMX20_02017 0.77 +0.8
2,107,642 + MPMX20_02017 0.84 +0.8
2,107,723 + MPMX20_02017 0.90 -0.5
2,107,759 - -0.2
2,107,759 - +0.5
2,107,816 - +2.3
2,107,820 + -0.1
2,107,820 + -1.8
2,107,828 - -1.1
2,107,828 - +0.0
2,107,884 - -0.9
2,107,923 - -1.1
2,107,934 - -2.1
2,108,063 + +0.1
2,108,136 - -0.2
2,108,162 + -2.1
2,108,241 - MPMX20_02018 0.17 -2.0
2,108,250 + MPMX20_02018 0.18 -0.8
2,108,286 - MPMX20_02018 0.21 +1.1
2,108,434 + MPMX20_02018 0.36 -1.1
2,108,465 - MPMX20_02018 0.39 -0.7
2,108,506 + MPMX20_02018 0.43 -0.0
2,108,561 + MPMX20_02018 0.48 -0.6
2,108,569 - MPMX20_02018 0.49 -1.8
2,108,607 + MPMX20_02018 0.53 -1.6
2,108,671 - MPMX20_02018 0.59 +0.9
2,108,675 - MPMX20_02018 0.59 -0.8
2,108,687 + MPMX20_02018 0.60 -0.4
2,108,752 - MPMX20_02018 0.67 -3.0
2,108,844 + MPMX20_02018 0.76 -1.8
2,108,852 - MPMX20_02018 0.77 -1.3
2,108,852 - MPMX20_02018 0.77 -1.6
2,108,929 + MPMX20_02018 0.84 -1.5
2,108,980 - MPMX20_02018 0.89 -0.8
2,109,003 - +0.7
2,109,320 - MPMX20_02019 0.10 +0.9
2,109,338 - MPMX20_02019 0.11 +0.1
2,109,339 + MPMX20_02019 0.11 -0.4
2,109,386 - MPMX20_02019 0.14 +1.7
2,109,415 + MPMX20_02019 0.16 -0.7
2,109,448 + MPMX20_02019 0.18 -0.3
2,109,456 - MPMX20_02019 0.19 -0.8
2,109,504 - MPMX20_02019 0.22 -0.6
2,109,529 - MPMX20_02019 0.24 -1.6
2,109,552 + MPMX20_02019 0.25 -3.3
2,109,552 + MPMX20_02019 0.25 -0.3
2,109,560 - MPMX20_02019 0.26 -1.9
2,109,560 - MPMX20_02019 0.26 -0.2
2,109,560 - MPMX20_02019 0.26 +3.9
2,109,561 - MPMX20_02019 0.26 -0.0
2,109,566 - MPMX20_02019 0.26 +1.7
2,109,602 + MPMX20_02019 0.28 -0.4
2,109,610 - MPMX20_02019 0.29 -1.8
2,109,644 + MPMX20_02019 0.31 -0.1
2,109,652 + MPMX20_02019 0.31 +1.3
2,109,655 - MPMX20_02019 0.32 -0.3
2,109,675 - MPMX20_02019 0.33 -1.5
2,109,675 - MPMX20_02019 0.33 -2.7
2,109,703 + MPMX20_02019 0.35 +4.7
2,109,732 + MPMX20_02019 0.37 -0.0
2,109,753 + MPMX20_02019 0.38 +1.0
2,109,753 + MPMX20_02019 0.38 -0.3
2,109,753 + MPMX20_02019 0.38 +0.5
2,109,761 - MPMX20_02019 0.38 +0.2
2,109,761 - MPMX20_02019 0.38 -1.2
2,109,869 - MPMX20_02019 0.45 +0.5
2,109,879 + MPMX20_02019 0.46 +0.7
2,109,894 - MPMX20_02019 0.47 +0.1
2,109,942 - MPMX20_02019 0.50 -1.8
2,109,947 + MPMX20_02019 0.50 +0.9
2,109,947 + MPMX20_02019 0.50 -1.8
2,109,954 - MPMX20_02019 0.51 -2.1
2,109,967 + MPMX20_02019 0.52 +0.1

Or see this region's nucleotide sequence