Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01866 and MPMX20_01867 overlap by 4 nucleotides MPMX20_01867 and MPMX20_01868 overlap by 14 nucleotides
MPMX20_01866: MPMX20_01866 - Arginine N-succinyltransferase, at 1,960,138 to 1,961,172
_01866
MPMX20_01867: MPMX20_01867 - N-succinylglutamate 5-semialdehyde dehydrogenase, at 1,961,169 to 1,962,656
_01867
MPMX20_01868: MPMX20_01868 - N-succinylarginine dihydrolase, at 1,962,643 to 1,963,968
_01868
Position (kb)
1961
1962
1963 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1960.208 kb on - strand at 1960.275 kb on - strand, within MPMX20_01866 at 1960.398 kb on - strand, within MPMX20_01866 at 1960.427 kb on + strand, within MPMX20_01866 at 1960.435 kb on - strand, within MPMX20_01866 at 1960.515 kb on + strand, within MPMX20_01866 at 1960.882 kb on - strand, within MPMX20_01866 at 1960.909 kb on + strand, within MPMX20_01866 at 1960.917 kb on - strand, within MPMX20_01866 at 1961.145 kb on + strand at 1961.153 kb on - strand at 1961.157 kb on + strand at 1961.165 kb on - strand at 1961.233 kb on - strand at 1961.239 kb on + strand at 1961.239 kb on + strand at 1961.247 kb on - strand at 1961.247 kb on - strand at 1961.272 kb on + strand at 1961.324 kb on - strand, within MPMX20_01867 at 1961.400 kb on + strand, within MPMX20_01867 at 1961.626 kb on + strand, within MPMX20_01867 at 1961.634 kb on - strand, within MPMX20_01867 at 1961.653 kb on - strand, within MPMX20_01867 at 1961.752 kb on + strand, within MPMX20_01867 at 1961.894 kb on + strand, within MPMX20_01867 at 1961.969 kb on - strand, within MPMX20_01867 at 1961.993 kb on + strand, within MPMX20_01867 at 1962.028 kb on + strand, within MPMX20_01867 at 1962.036 kb on - strand, within MPMX20_01867 at 1962.041 kb on - strand, within MPMX20_01867 at 1962.063 kb on + strand, within MPMX20_01867 at 1962.079 kb on + strand, within MPMX20_01867 at 1962.086 kb on - strand, within MPMX20_01867 at 1962.088 kb on - strand, within MPMX20_01867 at 1962.181 kb on - strand, within MPMX20_01867 at 1962.213 kb on + strand, within MPMX20_01867 at 1962.216 kb on - strand, within MPMX20_01867 at 1962.252 kb on - strand, within MPMX20_01867 at 1962.308 kb on + strand, within MPMX20_01867 at 1962.308 kb on + strand, within MPMX20_01867 at 1962.308 kb on + strand, within MPMX20_01867 at 1962.316 kb on - strand, within MPMX20_01867 at 1962.367 kb on + strand, within MPMX20_01867 at 1962.454 kb on + strand, within MPMX20_01867 at 1962.462 kb on - strand, within MPMX20_01867 at 1962.462 kb on - strand, within MPMX20_01867 at 1962.521 kb on - strand at 1962.545 kb on + strand at 1962.580 kb on + strand at 1962.632 kb on + strand at 1962.683 kb on - strand at 1962.685 kb on + strand at 1962.690 kb on + strand at 1962.698 kb on - strand at 1962.698 kb on - strand at 1962.698 kb on - strand at 1962.698 kb on - strand at 1962.698 kb on - strand at 1962.832 kb on + strand, within MPMX20_01868 at 1962.856 kb on + strand, within MPMX20_01868 at 1962.880 kb on - strand, within MPMX20_01868 at 1962.960 kb on - strand, within MPMX20_01868 at 1963.116 kb on + strand, within MPMX20_01868 at 1963.123 kb on - strand, within MPMX20_01868 at 1963.176 kb on + strand, within MPMX20_01868 at 1963.203 kb on - strand, within MPMX20_01868 at 1963.219 kb on - strand, within MPMX20_01868 at 1963.289 kb on + strand, within MPMX20_01868 at 1963.427 kb on + strand, within MPMX20_01868 at 1963.498 kb on - strand, within MPMX20_01868 at 1963.575 kb on - strand, within MPMX20_01868 at 1963.621 kb on - strand, within MPMX20_01868 at 1963.621 kb on - strand, within MPMX20_01868 at 1963.623 kb on + strand, within MPMX20_01868 at 1963.623 kb on + strand, within MPMX20_01868 at 1963.623 kb on + strand, within MPMX20_01868 at 1963.623 kb on + strand, within MPMX20_01868 at 1963.631 kb on - strand, within MPMX20_01868 at 1963.638 kb on - strand, within MPMX20_01868 at 1963.656 kb on + strand, within MPMX20_01868 at 1963.656 kb on + strand, within MPMX20_01868
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,960,208 - -2.9 1,960,275 - MPMX20_01866 0.13 -1.6 1,960,398 - MPMX20_01866 0.25 -1.8 1,960,427 + MPMX20_01866 0.28 +0.6 1,960,435 - MPMX20_01866 0.29 +1.2 1,960,515 + MPMX20_01866 0.36 +0.2 1,960,882 - MPMX20_01866 0.72 +0.5 1,960,909 + MPMX20_01866 0.74 -1.5 1,960,917 - MPMX20_01866 0.75 -0.7 1,961,145 + -0.0 1,961,153 - -2.9 1,961,157 + -2.7 1,961,165 - +1.8 1,961,233 - -0.4 1,961,239 + -1.1 1,961,239 + -0.4 1,961,247 - -1.7 1,961,247 - -0.5 1,961,272 + -0.6 1,961,324 - MPMX20_01867 0.10 +1.8 1,961,400 + MPMX20_01867 0.16 -3.2 1,961,626 + MPMX20_01867 0.31 -0.6 1,961,634 - MPMX20_01867 0.31 -2.3 1,961,653 - MPMX20_01867 0.33 -1.3 1,961,752 + MPMX20_01867 0.39 -1.8 1,961,894 + MPMX20_01867 0.49 -2.3 1,961,969 - MPMX20_01867 0.54 -0.4 1,961,993 + MPMX20_01867 0.55 +0.8 1,962,028 + MPMX20_01867 0.58 +2.8 1,962,036 - MPMX20_01867 0.58 -0.9 1,962,041 - MPMX20_01867 0.59 -3.3 1,962,063 + MPMX20_01867 0.60 -0.4 1,962,079 + MPMX20_01867 0.61 -2.0 1,962,086 - MPMX20_01867 0.62 -0.2 1,962,088 - MPMX20_01867 0.62 -1.6 1,962,181 - MPMX20_01867 0.68 -2.9 1,962,213 + MPMX20_01867 0.70 -1.2 1,962,216 - MPMX20_01867 0.70 -3.4 1,962,252 - MPMX20_01867 0.73 +1.2 1,962,308 + MPMX20_01867 0.77 -0.9 1,962,308 + MPMX20_01867 0.77 -0.0 1,962,308 + MPMX20_01867 0.77 +0.4 1,962,316 - MPMX20_01867 0.77 -1.5 1,962,367 + MPMX20_01867 0.81 +0.4 1,962,454 + MPMX20_01867 0.86 -2.4 1,962,462 - MPMX20_01867 0.87 -1.0 1,962,462 - MPMX20_01867 0.87 -1.2 1,962,521 - -0.6 1,962,545 + +0.5 1,962,580 + -2.2 1,962,632 + -0.4 1,962,683 - +0.6 1,962,685 + -0.2 1,962,690 + -1.5 1,962,698 - -1.0 1,962,698 - -3.8 1,962,698 - -2.4 1,962,698 - -0.7 1,962,698 - +0.4 1,962,832 + MPMX20_01868 0.14 -1.6 1,962,856 + MPMX20_01868 0.16 -0.8 1,962,880 - MPMX20_01868 0.18 -2.4 1,962,960 - MPMX20_01868 0.24 -0.9 1,963,116 + MPMX20_01868 0.36 -2.2 1,963,123 - MPMX20_01868 0.36 -0.6 1,963,176 + MPMX20_01868 0.40 -1.8 1,963,203 - MPMX20_01868 0.42 -1.5 1,963,219 - MPMX20_01868 0.43 -0.9 1,963,289 + MPMX20_01868 0.49 -1.4 1,963,427 + MPMX20_01868 0.59 -0.8 1,963,498 - MPMX20_01868 0.64 -1.9 1,963,575 - MPMX20_01868 0.70 -2.5 1,963,621 - MPMX20_01868 0.74 -1.3 1,963,621 - MPMX20_01868 0.74 -0.6 1,963,623 + MPMX20_01868 0.74 -0.2 1,963,623 + MPMX20_01868 0.74 -1.3 1,963,623 + MPMX20_01868 0.74 -0.9 1,963,623 + MPMX20_01868 0.74 -0.9 1,963,631 - MPMX20_01868 0.75 -2.7 1,963,638 - MPMX20_01868 0.75 -3.1 1,963,656 + MPMX20_01868 0.76 -0.3 1,963,656 + MPMX20_01868 0.76 -1.4
Or see this region's nucleotide sequence