Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01867

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01866 and MPMX20_01867 overlap by 4 nucleotidesMPMX20_01867 and MPMX20_01868 overlap by 14 nucleotides MPMX20_01866: MPMX20_01866 - Arginine N-succinyltransferase, at 1,960,138 to 1,961,172 _01866 MPMX20_01867: MPMX20_01867 - N-succinylglutamate 5-semialdehyde dehydrogenase, at 1,961,169 to 1,962,656 _01867 MPMX20_01868: MPMX20_01868 - N-succinylarginine dihydrolase, at 1,962,643 to 1,963,968 _01868 Position (kb) 1961 1962 1963Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1960.208 kb on - strandat 1960.275 kb on - strand, within MPMX20_01866at 1960.398 kb on - strand, within MPMX20_01866at 1960.427 kb on + strand, within MPMX20_01866at 1960.435 kb on - strand, within MPMX20_01866at 1960.515 kb on + strand, within MPMX20_01866at 1960.882 kb on - strand, within MPMX20_01866at 1960.909 kb on + strand, within MPMX20_01866at 1960.917 kb on - strand, within MPMX20_01866at 1961.145 kb on + strandat 1961.153 kb on - strandat 1961.157 kb on + strandat 1961.165 kb on - strandat 1961.233 kb on - strandat 1961.239 kb on + strandat 1961.239 kb on + strandat 1961.247 kb on - strandat 1961.247 kb on - strandat 1961.272 kb on + strandat 1961.324 kb on - strand, within MPMX20_01867at 1961.400 kb on + strand, within MPMX20_01867at 1961.626 kb on + strand, within MPMX20_01867at 1961.634 kb on - strand, within MPMX20_01867at 1961.653 kb on - strand, within MPMX20_01867at 1961.752 kb on + strand, within MPMX20_01867at 1961.894 kb on + strand, within MPMX20_01867at 1961.969 kb on - strand, within MPMX20_01867at 1961.993 kb on + strand, within MPMX20_01867at 1962.028 kb on + strand, within MPMX20_01867at 1962.036 kb on - strand, within MPMX20_01867at 1962.041 kb on - strand, within MPMX20_01867at 1962.063 kb on + strand, within MPMX20_01867at 1962.079 kb on + strand, within MPMX20_01867at 1962.086 kb on - strand, within MPMX20_01867at 1962.088 kb on - strand, within MPMX20_01867at 1962.181 kb on - strand, within MPMX20_01867at 1962.213 kb on + strand, within MPMX20_01867at 1962.216 kb on - strand, within MPMX20_01867at 1962.252 kb on - strand, within MPMX20_01867at 1962.308 kb on + strand, within MPMX20_01867at 1962.308 kb on + strand, within MPMX20_01867at 1962.308 kb on + strand, within MPMX20_01867at 1962.316 kb on - strand, within MPMX20_01867at 1962.367 kb on + strand, within MPMX20_01867at 1962.454 kb on + strand, within MPMX20_01867at 1962.462 kb on - strand, within MPMX20_01867at 1962.462 kb on - strand, within MPMX20_01867at 1962.521 kb on - strandat 1962.545 kb on + strandat 1962.580 kb on + strandat 1962.632 kb on + strandat 1962.683 kb on - strandat 1962.685 kb on + strandat 1962.690 kb on + strandat 1962.698 kb on - strandat 1962.698 kb on - strandat 1962.698 kb on - strandat 1962.698 kb on - strandat 1962.698 kb on - strandat 1962.832 kb on + strand, within MPMX20_01868at 1962.856 kb on + strand, within MPMX20_01868at 1962.880 kb on - strand, within MPMX20_01868at 1962.960 kb on - strand, within MPMX20_01868at 1963.116 kb on + strand, within MPMX20_01868at 1963.123 kb on - strand, within MPMX20_01868at 1963.176 kb on + strand, within MPMX20_01868at 1963.203 kb on - strand, within MPMX20_01868at 1963.219 kb on - strand, within MPMX20_01868at 1963.289 kb on + strand, within MPMX20_01868at 1963.427 kb on + strand, within MPMX20_01868at 1963.498 kb on - strand, within MPMX20_01868at 1963.575 kb on - strand, within MPMX20_01868at 1963.621 kb on - strand, within MPMX20_01868at 1963.621 kb on - strand, within MPMX20_01868at 1963.623 kb on + strand, within MPMX20_01868at 1963.623 kb on + strand, within MPMX20_01868at 1963.623 kb on + strand, within MPMX20_01868at 1963.623 kb on + strand, within MPMX20_01868at 1963.631 kb on - strand, within MPMX20_01868at 1963.638 kb on - strand, within MPMX20_01868at 1963.656 kb on + strand, within MPMX20_01868at 1963.656 kb on + strand, within MPMX20_01868

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,960,208 - -2.9
1,960,275 - MPMX20_01866 0.13 -1.6
1,960,398 - MPMX20_01866 0.25 -1.8
1,960,427 + MPMX20_01866 0.28 +0.6
1,960,435 - MPMX20_01866 0.29 +1.2
1,960,515 + MPMX20_01866 0.36 +0.2
1,960,882 - MPMX20_01866 0.72 +0.5
1,960,909 + MPMX20_01866 0.74 -1.5
1,960,917 - MPMX20_01866 0.75 -0.7
1,961,145 + -0.0
1,961,153 - -2.9
1,961,157 + -2.7
1,961,165 - +1.8
1,961,233 - -0.4
1,961,239 + -1.1
1,961,239 + -0.4
1,961,247 - -1.7
1,961,247 - -0.5
1,961,272 + -0.6
1,961,324 - MPMX20_01867 0.10 +1.8
1,961,400 + MPMX20_01867 0.16 -3.2
1,961,626 + MPMX20_01867 0.31 -0.6
1,961,634 - MPMX20_01867 0.31 -2.3
1,961,653 - MPMX20_01867 0.33 -1.3
1,961,752 + MPMX20_01867 0.39 -1.8
1,961,894 + MPMX20_01867 0.49 -2.3
1,961,969 - MPMX20_01867 0.54 -0.4
1,961,993 + MPMX20_01867 0.55 +0.8
1,962,028 + MPMX20_01867 0.58 +2.8
1,962,036 - MPMX20_01867 0.58 -0.9
1,962,041 - MPMX20_01867 0.59 -3.3
1,962,063 + MPMX20_01867 0.60 -0.4
1,962,079 + MPMX20_01867 0.61 -2.0
1,962,086 - MPMX20_01867 0.62 -0.2
1,962,088 - MPMX20_01867 0.62 -1.6
1,962,181 - MPMX20_01867 0.68 -2.9
1,962,213 + MPMX20_01867 0.70 -1.2
1,962,216 - MPMX20_01867 0.70 -3.4
1,962,252 - MPMX20_01867 0.73 +1.2
1,962,308 + MPMX20_01867 0.77 -0.9
1,962,308 + MPMX20_01867 0.77 -0.0
1,962,308 + MPMX20_01867 0.77 +0.4
1,962,316 - MPMX20_01867 0.77 -1.5
1,962,367 + MPMX20_01867 0.81 +0.4
1,962,454 + MPMX20_01867 0.86 -2.4
1,962,462 - MPMX20_01867 0.87 -1.0
1,962,462 - MPMX20_01867 0.87 -1.2
1,962,521 - -0.6
1,962,545 + +0.5
1,962,580 + -2.2
1,962,632 + -0.4
1,962,683 - +0.6
1,962,685 + -0.2
1,962,690 + -1.5
1,962,698 - -1.0
1,962,698 - -3.8
1,962,698 - -2.4
1,962,698 - -0.7
1,962,698 - +0.4
1,962,832 + MPMX20_01868 0.14 -1.6
1,962,856 + MPMX20_01868 0.16 -0.8
1,962,880 - MPMX20_01868 0.18 -2.4
1,962,960 - MPMX20_01868 0.24 -0.9
1,963,116 + MPMX20_01868 0.36 -2.2
1,963,123 - MPMX20_01868 0.36 -0.6
1,963,176 + MPMX20_01868 0.40 -1.8
1,963,203 - MPMX20_01868 0.42 -1.5
1,963,219 - MPMX20_01868 0.43 -0.9
1,963,289 + MPMX20_01868 0.49 -1.4
1,963,427 + MPMX20_01868 0.59 -0.8
1,963,498 - MPMX20_01868 0.64 -1.9
1,963,575 - MPMX20_01868 0.70 -2.5
1,963,621 - MPMX20_01868 0.74 -1.3
1,963,621 - MPMX20_01868 0.74 -0.6
1,963,623 + MPMX20_01868 0.74 -0.2
1,963,623 + MPMX20_01868 0.74 -1.3
1,963,623 + MPMX20_01868 0.74 -0.9
1,963,623 + MPMX20_01868 0.74 -0.9
1,963,631 - MPMX20_01868 0.75 -2.7
1,963,638 - MPMX20_01868 0.75 -3.1
1,963,656 + MPMX20_01868 0.76 -0.3
1,963,656 + MPMX20_01868 0.76 -1.4

Or see this region's nucleotide sequence