Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01865 and MPMX20_01866 overlap by 4 nucleotides MPMX20_01866 and MPMX20_01867 overlap by 4 nucleotides
MPMX20_01865: MPMX20_01865 - Succinylornithine transaminase, at 1,958,921 to 1,960,141
_01865
MPMX20_01866: MPMX20_01866 - Arginine N-succinyltransferase, at 1,960,138 to 1,961,172
_01866
MPMX20_01867: MPMX20_01867 - N-succinylglutamate 5-semialdehyde dehydrogenase, at 1,961,169 to 1,962,656
_01867
Position (kb)
1960
1961
1962 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1959.167 kb on + strand, within MPMX20_01865 at 1959.167 kb on + strand, within MPMX20_01865 at 1959.195 kb on + strand, within MPMX20_01865 at 1959.254 kb on + strand, within MPMX20_01865 at 1959.254 kb on + strand, within MPMX20_01865 at 1959.262 kb on - strand, within MPMX20_01865 at 1959.262 kb on - strand, within MPMX20_01865 at 1959.309 kb on + strand, within MPMX20_01865 at 1959.309 kb on + strand, within MPMX20_01865 at 1959.312 kb on - strand, within MPMX20_01865 at 1959.317 kb on - strand, within MPMX20_01865 at 1959.476 kb on - strand, within MPMX20_01865 at 1959.497 kb on - strand, within MPMX20_01865 at 1959.499 kb on + strand, within MPMX20_01865 at 1959.499 kb on + strand, within MPMX20_01865 at 1959.502 kb on - strand, within MPMX20_01865 at 1959.593 kb on + strand, within MPMX20_01865 at 1959.593 kb on + strand, within MPMX20_01865 at 1959.593 kb on + strand, within MPMX20_01865 at 1959.630 kb on - strand, within MPMX20_01865 at 1959.645 kb on + strand, within MPMX20_01865 at 1959.702 kb on + strand, within MPMX20_01865 at 1959.710 kb on - strand, within MPMX20_01865 at 1959.710 kb on - strand, within MPMX20_01865 at 1959.756 kb on + strand, within MPMX20_01865 at 1959.756 kb on + strand, within MPMX20_01865 at 1959.763 kb on + strand, within MPMX20_01865 at 1959.764 kb on - strand, within MPMX20_01865 at 1959.768 kb on + strand, within MPMX20_01865 at 1959.776 kb on - strand, within MPMX20_01865 at 1959.830 kb on + strand, within MPMX20_01865 at 1959.832 kb on + strand, within MPMX20_01865 at 1959.832 kb on + strand, within MPMX20_01865 at 1959.832 kb on + strand, within MPMX20_01865 at 1959.840 kb on - strand, within MPMX20_01865 at 1959.848 kb on - strand, within MPMX20_01865 at 1959.859 kb on - strand, within MPMX20_01865 at 1959.882 kb on - strand, within MPMX20_01865 at 1959.882 kb on - strand, within MPMX20_01865 at 1959.904 kb on + strand, within MPMX20_01865 at 1959.904 kb on + strand, within MPMX20_01865 at 1959.912 kb on - strand, within MPMX20_01865 at 1959.913 kb on + strand, within MPMX20_01865 at 1960.093 kb on - strand at 1960.095 kb on + strand at 1960.100 kb on + strand at 1960.110 kb on + strand at 1960.113 kb on - strand at 1960.118 kb on - strand at 1960.208 kb on - strand at 1960.275 kb on - strand, within MPMX20_01866 at 1960.398 kb on - strand, within MPMX20_01866 at 1960.427 kb on + strand, within MPMX20_01866 at 1960.435 kb on - strand, within MPMX20_01866 at 1960.515 kb on + strand, within MPMX20_01866 at 1960.882 kb on - strand, within MPMX20_01866 at 1960.909 kb on + strand, within MPMX20_01866 at 1960.917 kb on - strand, within MPMX20_01866 at 1961.145 kb on + strand at 1961.153 kb on - strand at 1961.157 kb on + strand at 1961.165 kb on - strand at 1961.233 kb on - strand at 1961.239 kb on + strand at 1961.239 kb on + strand at 1961.247 kb on - strand at 1961.247 kb on - strand at 1961.272 kb on + strand at 1961.324 kb on - strand, within MPMX20_01867 at 1961.400 kb on + strand, within MPMX20_01867 at 1961.626 kb on + strand, within MPMX20_01867 at 1961.634 kb on - strand, within MPMX20_01867 at 1961.653 kb on - strand, within MPMX20_01867 at 1961.752 kb on + strand, within MPMX20_01867 at 1961.894 kb on + strand, within MPMX20_01867 at 1961.969 kb on - strand, within MPMX20_01867 at 1961.993 kb on + strand, within MPMX20_01867 at 1962.028 kb on + strand, within MPMX20_01867 at 1962.036 kb on - strand, within MPMX20_01867 at 1962.041 kb on - strand, within MPMX20_01867 at 1962.063 kb on + strand, within MPMX20_01867 at 1962.079 kb on + strand, within MPMX20_01867 at 1962.086 kb on - strand, within MPMX20_01867 at 1962.088 kb on - strand, within MPMX20_01867
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,959,167 + MPMX20_01865 0.20 -2.2 1,959,167 + MPMX20_01865 0.20 -1.5 1,959,195 + MPMX20_01865 0.22 -1.0 1,959,254 + MPMX20_01865 0.27 -2.0 1,959,254 + MPMX20_01865 0.27 -1.9 1,959,262 - MPMX20_01865 0.28 -2.0 1,959,262 - MPMX20_01865 0.28 -0.8 1,959,309 + MPMX20_01865 0.32 -1.5 1,959,309 + MPMX20_01865 0.32 -0.2 1,959,312 - MPMX20_01865 0.32 -1.8 1,959,317 - MPMX20_01865 0.32 -1.5 1,959,476 - MPMX20_01865 0.45 -1.0 1,959,497 - MPMX20_01865 0.47 -1.5 1,959,499 + MPMX20_01865 0.47 -0.4 1,959,499 + MPMX20_01865 0.47 -1.0 1,959,502 - MPMX20_01865 0.48 -0.0 1,959,593 + MPMX20_01865 0.55 -1.9 1,959,593 + MPMX20_01865 0.55 +0.8 1,959,593 + MPMX20_01865 0.55 -0.6 1,959,630 - MPMX20_01865 0.58 -2.4 1,959,645 + MPMX20_01865 0.59 +0.2 1,959,702 + MPMX20_01865 0.64 -0.0 1,959,710 - MPMX20_01865 0.65 -1.6 1,959,710 - MPMX20_01865 0.65 -0.5 1,959,756 + MPMX20_01865 0.68 -2.3 1,959,756 + MPMX20_01865 0.68 -1.6 1,959,763 + MPMX20_01865 0.69 -1.8 1,959,764 - MPMX20_01865 0.69 +0.6 1,959,768 + MPMX20_01865 0.69 -2.1 1,959,776 - MPMX20_01865 0.70 -1.0 1,959,830 + MPMX20_01865 0.74 -1.4 1,959,832 + MPMX20_01865 0.75 -2.0 1,959,832 + MPMX20_01865 0.75 -2.2 1,959,832 + MPMX20_01865 0.75 +0.2 1,959,840 - MPMX20_01865 0.75 +1.2 1,959,848 - MPMX20_01865 0.76 -0.9 1,959,859 - MPMX20_01865 0.77 -1.0 1,959,882 - MPMX20_01865 0.79 -1.4 1,959,882 - MPMX20_01865 0.79 -0.9 1,959,904 + MPMX20_01865 0.81 -0.0 1,959,904 + MPMX20_01865 0.81 -1.0 1,959,912 - MPMX20_01865 0.81 +0.4 1,959,913 + MPMX20_01865 0.81 -1.8 1,960,093 - -1.4 1,960,095 + +0.4 1,960,100 + +0.2 1,960,110 + -2.2 1,960,113 - -2.7 1,960,118 - +0.8 1,960,208 - -2.9 1,960,275 - MPMX20_01866 0.13 -1.6 1,960,398 - MPMX20_01866 0.25 -1.8 1,960,427 + MPMX20_01866 0.28 +0.6 1,960,435 - MPMX20_01866 0.29 +1.2 1,960,515 + MPMX20_01866 0.36 +0.2 1,960,882 - MPMX20_01866 0.72 +0.5 1,960,909 + MPMX20_01866 0.74 -1.5 1,960,917 - MPMX20_01866 0.75 -0.7 1,961,145 + -0.0 1,961,153 - -2.9 1,961,157 + -2.7 1,961,165 - +1.8 1,961,233 - -0.4 1,961,239 + -1.1 1,961,239 + -0.4 1,961,247 - -1.7 1,961,247 - -0.5 1,961,272 + -0.6 1,961,324 - MPMX20_01867 0.10 +1.8 1,961,400 + MPMX20_01867 0.16 -3.2 1,961,626 + MPMX20_01867 0.31 -0.6 1,961,634 - MPMX20_01867 0.31 -2.3 1,961,653 - MPMX20_01867 0.33 -1.3 1,961,752 + MPMX20_01867 0.39 -1.8 1,961,894 + MPMX20_01867 0.49 -2.3 1,961,969 - MPMX20_01867 0.54 -0.4 1,961,993 + MPMX20_01867 0.55 +0.8 1,962,028 + MPMX20_01867 0.58 +2.8 1,962,036 - MPMX20_01867 0.58 -0.9 1,962,041 - MPMX20_01867 0.59 -3.3 1,962,063 + MPMX20_01867 0.60 -0.4 1,962,079 + MPMX20_01867 0.61 -2.0 1,962,086 - MPMX20_01867 0.62 -0.2 1,962,088 - MPMX20_01867 0.62 -1.6
Or see this region's nucleotide sequence