Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01849

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01847 and MPMX20_01848 are separated by 170 nucleotidesMPMX20_01848 and MPMX20_01849 are separated by 9 nucleotidesMPMX20_01849 and MPMX20_01850 are separated by 63 nucleotides MPMX20_01847: MPMX20_01847 - Chitinase A1, at 1,939,982 to 1,941,241 _01847 MPMX20_01848: MPMX20_01848 - Nicotinamidase, at 1,941,412 to 1,942,053 _01848 MPMX20_01849: MPMX20_01849 - L-asparaginase 1, at 1,942,063 to 1,943,079 _01849 MPMX20_01850: MPMX20_01850 - Protease 4, at 1,943,143 to 1,944,999 _01850 Position (kb) 1942 1943 1944Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1941.064 kb on + strand, within MPMX20_01847at 1941.142 kb on + strandat 1941.170 kb on + strandat 1941.170 kb on + strandat 1941.170 kb on + strandat 1941.170 kb on + strandat 1941.178 kb on - strandat 1941.178 kb on - strandat 1941.203 kb on + strandat 1941.338 kb on + strandat 1941.346 kb on - strandat 1941.384 kb on - strandat 1941.389 kb on - strandat 1941.394 kb on - strandat 1941.410 kb on + strandat 1941.410 kb on + strandat 1941.418 kb on - strandat 1941.418 kb on - strandat 1941.435 kb on + strandat 1941.443 kb on - strandat 1941.443 kb on - strandat 1941.450 kb on - strandat 1941.453 kb on - strandat 1941.483 kb on + strand, within MPMX20_01848at 1941.491 kb on - strand, within MPMX20_01848at 1941.501 kb on - strand, within MPMX20_01848at 1941.501 kb on - strand, within MPMX20_01848at 1941.543 kb on + strand, within MPMX20_01848at 1941.545 kb on + strand, within MPMX20_01848at 1941.555 kb on + strand, within MPMX20_01848at 1941.573 kb on + strand, within MPMX20_01848at 1941.601 kb on - strand, within MPMX20_01848at 1941.830 kb on + strand, within MPMX20_01848at 1941.838 kb on - strand, within MPMX20_01848at 1941.838 kb on - strand, within MPMX20_01848at 1941.840 kb on + strand, within MPMX20_01848at 1941.847 kb on + strand, within MPMX20_01848at 1941.849 kb on + strand, within MPMX20_01848at 1941.849 kb on + strand, within MPMX20_01848at 1941.849 kb on + strand, within MPMX20_01848at 1941.849 kb on + strand, within MPMX20_01848at 1941.855 kb on - strand, within MPMX20_01848at 1941.857 kb on - strand, within MPMX20_01848at 1941.857 kb on - strand, within MPMX20_01848at 1941.929 kb on + strand, within MPMX20_01848at 1941.960 kb on + strand, within MPMX20_01848at 1941.983 kb on + strand, within MPMX20_01848at 1942.139 kb on - strandat 1942.178 kb on - strand, within MPMX20_01849at 1942.374 kb on - strand, within MPMX20_01849at 1942.407 kb on + strand, within MPMX20_01849at 1942.449 kb on + strand, within MPMX20_01849at 1942.532 kb on + strand, within MPMX20_01849at 1942.561 kb on + strand, within MPMX20_01849at 1942.569 kb on + strand, within MPMX20_01849at 1942.583 kb on + strand, within MPMX20_01849at 1942.672 kb on - strand, within MPMX20_01849at 1942.767 kb on + strand, within MPMX20_01849at 1942.767 kb on + strand, within MPMX20_01849at 1942.769 kb on + strand, within MPMX20_01849at 1942.774 kb on + strand, within MPMX20_01849at 1942.779 kb on + strand, within MPMX20_01849at 1942.821 kb on + strand, within MPMX20_01849at 1942.829 kb on + strand, within MPMX20_01849at 1942.851 kb on + strand, within MPMX20_01849at 1942.962 kb on - strand, within MPMX20_01849at 1942.970 kb on + strand, within MPMX20_01849at 1943.026 kb on + strandat 1943.043 kb on + strandat 1943.048 kb on + strandat 1943.048 kb on + strandat 1943.051 kb on - strandat 1943.056 kb on - strandat 1943.089 kb on - strandat 1943.151 kb on + strandat 1943.151 kb on + strandat 1943.151 kb on + strandat 1943.151 kb on + strandat 1943.159 kb on - strandat 1943.161 kb on + strandat 1943.161 kb on + strandat 1943.169 kb on - strandat 1943.180 kb on - strandat 1943.182 kb on + strandat 1943.194 kb on + strandat 1943.202 kb on - strandat 1943.231 kb on + strandat 1943.266 kb on + strandat 1943.308 kb on - strandat 1943.322 kb on - strandat 1943.358 kb on - strand, within MPMX20_01850at 1943.368 kb on - strand, within MPMX20_01850at 1943.370 kb on + strand, within MPMX20_01850at 1943.370 kb on + strand, within MPMX20_01850at 1943.377 kb on - strand, within MPMX20_01850at 1943.426 kb on - strand, within MPMX20_01850at 1943.446 kb on - strand, within MPMX20_01850at 1943.460 kb on - strand, within MPMX20_01850at 1943.460 kb on - strand, within MPMX20_01850at 1943.462 kb on + strand, within MPMX20_01850at 1943.462 kb on + strand, within MPMX20_01850at 1943.462 kb on + strand, within MPMX20_01850at 1943.462 kb on + strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.470 kb on - strand, within MPMX20_01850at 1943.475 kb on - strand, within MPMX20_01850at 1943.481 kb on - strand, within MPMX20_01850at 1943.494 kb on + strand, within MPMX20_01850at 1943.558 kb on + strand, within MPMX20_01850at 1943.566 kb on - strand, within MPMX20_01850at 1943.681 kb on + strand, within MPMX20_01850at 1943.681 kb on + strand, within MPMX20_01850at 1943.681 kb on + strand, within MPMX20_01850at 1943.691 kb on + strand, within MPMX20_01850at 1943.720 kb on + strand, within MPMX20_01850at 1943.871 kb on + strand, within MPMX20_01850at 1943.890 kb on + strand, within MPMX20_01850at 1943.892 kb on + strand, within MPMX20_01850at 1943.983 kb on + strand, within MPMX20_01850

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,941,064 + MPMX20_01847 0.86 -1.3
1,941,142 + +0.8
1,941,170 + +0.6
1,941,170 + +0.8
1,941,170 + -0.5
1,941,170 + +0.0
1,941,178 - -1.9
1,941,178 - +1.8
1,941,203 + +1.2
1,941,338 + +0.8
1,941,346 - -0.3
1,941,384 - -1.4
1,941,389 - +0.2
1,941,394 - -1.4
1,941,410 + -1.4
1,941,410 + -0.4
1,941,418 - -1.9
1,941,418 - -0.1
1,941,435 + +0.6
1,941,443 - +0.6
1,941,443 - -1.5
1,941,450 - -0.7
1,941,453 - -0.7
1,941,483 + MPMX20_01848 0.11 -0.4
1,941,491 - MPMX20_01848 0.12 +2.0
1,941,501 - MPMX20_01848 0.14 +0.9
1,941,501 - MPMX20_01848 0.14 -0.1
1,941,543 + MPMX20_01848 0.20 -0.8
1,941,545 + MPMX20_01848 0.21 -0.4
1,941,555 + MPMX20_01848 0.22 -0.8
1,941,573 + MPMX20_01848 0.25 +0.9
1,941,601 - MPMX20_01848 0.29 -0.2
1,941,830 + MPMX20_01848 0.65 +0.5
1,941,838 - MPMX20_01848 0.66 +0.6
1,941,838 - MPMX20_01848 0.66 -1.2
1,941,840 + MPMX20_01848 0.67 -1.4
1,941,847 + MPMX20_01848 0.68 -0.1
1,941,849 + MPMX20_01848 0.68 +2.2
1,941,849 + MPMX20_01848 0.68 -0.2
1,941,849 + MPMX20_01848 0.68 -0.4
1,941,849 + MPMX20_01848 0.68 -0.8
1,941,855 - MPMX20_01848 0.69 -1.5
1,941,857 - MPMX20_01848 0.69 -1.0
1,941,857 - MPMX20_01848 0.69 +0.2
1,941,929 + MPMX20_01848 0.81 -0.7
1,941,960 + MPMX20_01848 0.85 -0.5
1,941,983 + MPMX20_01848 0.89 -0.6
1,942,139 - -0.2
1,942,178 - MPMX20_01849 0.11 -0.7
1,942,374 - MPMX20_01849 0.31 +0.2
1,942,407 + MPMX20_01849 0.34 +0.2
1,942,449 + MPMX20_01849 0.38 -1.5
1,942,532 + MPMX20_01849 0.46 -0.2
1,942,561 + MPMX20_01849 0.49 -2.4
1,942,569 + MPMX20_01849 0.50 +1.3
1,942,583 + MPMX20_01849 0.51 -0.8
1,942,672 - MPMX20_01849 0.60 -1.5
1,942,767 + MPMX20_01849 0.69 -0.7
1,942,767 + MPMX20_01849 0.69 +0.8
1,942,769 + MPMX20_01849 0.69 -0.4
1,942,774 + MPMX20_01849 0.70 -0.8
1,942,779 + MPMX20_01849 0.70 -0.4
1,942,821 + MPMX20_01849 0.75 -0.4
1,942,829 + MPMX20_01849 0.75 -1.6
1,942,851 + MPMX20_01849 0.77 -0.4
1,942,962 - MPMX20_01849 0.88 -0.5
1,942,970 + MPMX20_01849 0.89 -0.4
1,943,026 + -1.0
1,943,043 + +2.2
1,943,048 + +0.3
1,943,048 + -1.7
1,943,051 - +0.2
1,943,056 - +0.8
1,943,089 - +1.8
1,943,151 + -1.0
1,943,151 + -0.0
1,943,151 + -0.4
1,943,151 + -0.4
1,943,159 - +0.8
1,943,161 + -0.6
1,943,161 + -1.0
1,943,169 - -1.6
1,943,180 - +0.1
1,943,182 + -0.6
1,943,194 + +0.8
1,943,202 - -0.0
1,943,231 + +0.4
1,943,266 + -0.5
1,943,308 - -1.0
1,943,322 - +1.8
1,943,358 - MPMX20_01850 0.12 -0.9
1,943,368 - MPMX20_01850 0.12 -1.5
1,943,370 + MPMX20_01850 0.12 +0.2
1,943,370 + MPMX20_01850 0.12 +0.2
1,943,377 - MPMX20_01850 0.13 -2.2
1,943,426 - MPMX20_01850 0.15 -0.3
1,943,446 - MPMX20_01850 0.16 +2.8
1,943,460 - MPMX20_01850 0.17 -0.5
1,943,460 - MPMX20_01850 0.17 +0.2
1,943,462 + MPMX20_01850 0.17 -1.3
1,943,462 + MPMX20_01850 0.17 -1.0
1,943,462 + MPMX20_01850 0.17 -0.8
1,943,462 + MPMX20_01850 0.17 -0.4
1,943,470 - MPMX20_01850 0.18 +0.4
1,943,470 - MPMX20_01850 0.18 -1.6
1,943,470 - MPMX20_01850 0.18 -0.7
1,943,470 - MPMX20_01850 0.18 +0.6
1,943,470 - MPMX20_01850 0.18 +0.0
1,943,470 - MPMX20_01850 0.18 +0.8
1,943,470 - MPMX20_01850 0.18 -1.0
1,943,475 - MPMX20_01850 0.18 -0.7
1,943,481 - MPMX20_01850 0.18 +0.2
1,943,494 + MPMX20_01850 0.19 -1.9
1,943,558 + MPMX20_01850 0.22 +0.2
1,943,566 - MPMX20_01850 0.23 -1.4
1,943,681 + MPMX20_01850 0.29 +0.4
1,943,681 + MPMX20_01850 0.29 -1.5
1,943,681 + MPMX20_01850 0.29 -0.2
1,943,691 + MPMX20_01850 0.30 -0.9
1,943,720 + MPMX20_01850 0.31 +0.3
1,943,871 + MPMX20_01850 0.39 +0.2
1,943,890 + MPMX20_01850 0.40 +1.0
1,943,892 + MPMX20_01850 0.40 -2.6
1,943,983 + MPMX20_01850 0.45 -0.2

Or see this region's nucleotide sequence