Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01664 and MPMX20_01665 overlap by 4 nucleotides MPMX20_01665 and MPMX20_01666 are separated by 10 nucleotides MPMX20_01666 and MPMX20_01667 are separated by 153 nucleotides
MPMX20_01664: MPMX20_01664 - 1-carboxybiuret hydrolase subunit AtzE, at 1,762,434 to 1,763,831
_01664
MPMX20_01665: MPMX20_01665 - hypothetical protein, at 1,763,828 to 1,764,016
_01665
MPMX20_01666: MPMX20_01666 - Oxamate amidohydrolase proenzyme, at 1,764,027 to 1,765,610
_01666
MPMX20_01667: MPMX20_01667 - hypothetical protein, at 1,765,764 to 1,766,603
_01667
Position (kb)
1764
1765
1766 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1763.085 kb on + strand, within MPMX20_01664 at 1763.093 kb on - strand, within MPMX20_01664 at 1763.141 kb on - strand, within MPMX20_01664 at 1763.203 kb on - strand, within MPMX20_01664 at 1763.258 kb on - strand, within MPMX20_01664 at 1763.331 kb on - strand, within MPMX20_01664 at 1763.407 kb on - strand, within MPMX20_01664 at 1763.493 kb on + strand, within MPMX20_01664 at 1763.515 kb on - strand, within MPMX20_01664 at 1763.542 kb on - strand, within MPMX20_01664 at 1763.544 kb on + strand, within MPMX20_01664 at 1763.544 kb on + strand, within MPMX20_01664 at 1763.549 kb on + strand, within MPMX20_01664 at 1763.549 kb on + strand, within MPMX20_01664 at 1763.562 kb on - strand, within MPMX20_01664 at 1763.708 kb on - strand at 1763.714 kb on - strand at 1763.737 kb on - strand at 1763.802 kb on - strand at 1763.825 kb on + strand at 1763.825 kb on + strand at 1763.842 kb on + strand at 1763.845 kb on - strand at 1763.920 kb on - strand, within MPMX20_01665 at 1763.924 kb on - strand, within MPMX20_01665 at 1763.950 kb on + strand, within MPMX20_01665 at 1763.950 kb on + strand, within MPMX20_01665 at 1763.953 kb on - strand, within MPMX20_01665 at 1764.078 kb on - strand at 1764.078 kb on - strand at 1764.114 kb on + strand at 1764.114 kb on + strand at 1764.114 kb on + strand at 1764.206 kb on + strand, within MPMX20_01666 at 1764.235 kb on - strand, within MPMX20_01666 at 1764.237 kb on - strand, within MPMX20_01666 at 1764.250 kb on - strand, within MPMX20_01666 at 1764.270 kb on + strand, within MPMX20_01666 at 1764.278 kb on + strand, within MPMX20_01666 at 1764.278 kb on + strand, within MPMX20_01666 at 1764.286 kb on - strand, within MPMX20_01666 at 1764.293 kb on - strand, within MPMX20_01666 at 1764.467 kb on - strand, within MPMX20_01666 at 1764.620 kb on - strand, within MPMX20_01666 at 1764.682 kb on + strand, within MPMX20_01666 at 1764.718 kb on - strand, within MPMX20_01666 at 1764.725 kb on - strand, within MPMX20_01666 at 1764.796 kb on + strand, within MPMX20_01666 at 1764.820 kb on - strand, within MPMX20_01666 at 1764.864 kb on + strand, within MPMX20_01666 at 1764.872 kb on - strand, within MPMX20_01666 at 1764.943 kb on + strand, within MPMX20_01666 at 1765.038 kb on - strand, within MPMX20_01666 at 1765.040 kb on - strand, within MPMX20_01666 at 1765.047 kb on + strand, within MPMX20_01666 at 1765.130 kb on + strand, within MPMX20_01666 at 1765.266 kb on - strand, within MPMX20_01666 at 1765.313 kb on - strand, within MPMX20_01666 at 1765.371 kb on - strand, within MPMX20_01666 at 1765.375 kb on - strand, within MPMX20_01666 at 1765.456 kb on + strand at 1765.476 kb on - strand at 1765.539 kb on + strand at 1765.547 kb on - strand at 1765.770 kb on - strand at 1765.812 kb on + strand at 1765.819 kb on + strand at 1765.819 kb on + strand at 1765.874 kb on - strand, within MPMX20_01667 at 1765.876 kb on + strand, within MPMX20_01667 at 1765.892 kb on + strand, within MPMX20_01667 at 1765.900 kb on - strand, within MPMX20_01667 at 1765.904 kb on + strand, within MPMX20_01667 at 1765.943 kb on - strand, within MPMX20_01667 at 1765.952 kb on + strand, within MPMX20_01667 at 1765.959 kb on - strand, within MPMX20_01667 at 1765.971 kb on + strand, within MPMX20_01667 at 1765.989 kb on - strand, within MPMX20_01667 at 1766.030 kb on + strand, within MPMX20_01667 at 1766.035 kb on + strand, within MPMX20_01667 at 1766.038 kb on - strand, within MPMX20_01667 at 1766.038 kb on - strand, within MPMX20_01667 at 1766.095 kb on - strand, within MPMX20_01667 at 1766.103 kb on + strand, within MPMX20_01667 at 1766.129 kb on - strand, within MPMX20_01667 at 1766.168 kb on + strand, within MPMX20_01667 at 1766.176 kb on - strand, within MPMX20_01667 at 1766.442 kb on + strand, within MPMX20_01667 at 1766.442 kb on + strand, within MPMX20_01667 at 1766.450 kb on - strand, within MPMX20_01667 at 1766.465 kb on + strand, within MPMX20_01667 at 1766.504 kb on + strand, within MPMX20_01667 at 1766.587 kb on + strand at 1766.587 kb on + strand at 1766.595 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,763,085 + MPMX20_01664 0.47 +0.9 1,763,093 - MPMX20_01664 0.47 +0.1 1,763,141 - MPMX20_01664 0.51 +0.6 1,763,203 - MPMX20_01664 0.55 +0.1 1,763,258 - MPMX20_01664 0.59 +0.5 1,763,331 - MPMX20_01664 0.64 -2.2 1,763,407 - MPMX20_01664 0.70 +2.0 1,763,493 + MPMX20_01664 0.76 +2.7 1,763,515 - MPMX20_01664 0.77 -0.6 1,763,542 - MPMX20_01664 0.79 +0.7 1,763,544 + MPMX20_01664 0.79 +0.9 1,763,544 + MPMX20_01664 0.79 +1.1 1,763,549 + MPMX20_01664 0.80 -1.8 1,763,549 + MPMX20_01664 0.80 +0.4 1,763,562 - MPMX20_01664 0.81 -0.5 1,763,708 - -1.3 1,763,714 - -0.9 1,763,737 - +0.0 1,763,802 - -1.5 1,763,825 + +1.1 1,763,825 + +3.1 1,763,842 + +1.7 1,763,845 - +1.3 1,763,920 - MPMX20_01665 0.49 -1.3 1,763,924 - MPMX20_01665 0.51 -1.4 1,763,950 + MPMX20_01665 0.65 +0.7 1,763,950 + MPMX20_01665 0.65 -1.1 1,763,953 - MPMX20_01665 0.66 -0.7 1,764,078 - -1.4 1,764,078 - +0.5 1,764,114 + -0.4 1,764,114 + -0.9 1,764,114 + +1.7 1,764,206 + MPMX20_01666 0.11 +1.0 1,764,235 - MPMX20_01666 0.13 -0.3 1,764,237 - MPMX20_01666 0.13 -0.9 1,764,250 - MPMX20_01666 0.14 +1.7 1,764,270 + MPMX20_01666 0.15 +1.7 1,764,278 + MPMX20_01666 0.16 -0.3 1,764,278 + MPMX20_01666 0.16 +0.9 1,764,286 - MPMX20_01666 0.16 -0.2 1,764,293 - MPMX20_01666 0.17 -0.7 1,764,467 - MPMX20_01666 0.28 +0.7 1,764,620 - MPMX20_01666 0.37 -0.9 1,764,682 + MPMX20_01666 0.41 -0.4 1,764,718 - MPMX20_01666 0.44 -1.5 1,764,725 - MPMX20_01666 0.44 +0.3 1,764,796 + MPMX20_01666 0.49 +0.4 1,764,820 - MPMX20_01666 0.50 +0.5 1,764,864 + MPMX20_01666 0.53 -0.8 1,764,872 - MPMX20_01666 0.53 +0.2 1,764,943 + MPMX20_01666 0.58 +0.4 1,765,038 - MPMX20_01666 0.64 -0.1 1,765,040 - MPMX20_01666 0.64 +0.2 1,765,047 + MPMX20_01666 0.64 +1.4 1,765,130 + MPMX20_01666 0.70 -0.4 1,765,266 - MPMX20_01666 0.78 -1.0 1,765,313 - MPMX20_01666 0.81 -1.9 1,765,371 - MPMX20_01666 0.85 +1.7 1,765,375 - MPMX20_01666 0.85 +1.4 1,765,456 + +0.4 1,765,476 - +1.0 1,765,539 + +0.8 1,765,547 - +0.0 1,765,770 - +0.6 1,765,812 + -0.8 1,765,819 + -1.0 1,765,819 + +1.6 1,765,874 - MPMX20_01667 0.13 +0.9 1,765,876 + MPMX20_01667 0.13 -0.9 1,765,892 + MPMX20_01667 0.15 +3.3 1,765,900 - MPMX20_01667 0.16 -0.4 1,765,904 + MPMX20_01667 0.17 -0.6 1,765,943 - MPMX20_01667 0.21 -0.4 1,765,952 + MPMX20_01667 0.22 +0.3 1,765,959 - MPMX20_01667 0.23 -0.2 1,765,971 + MPMX20_01667 0.25 -1.9 1,765,989 - MPMX20_01667 0.27 +1.4 1,766,030 + MPMX20_01667 0.32 +0.0 1,766,035 + MPMX20_01667 0.32 -0.3 1,766,038 - MPMX20_01667 0.33 +0.4 1,766,038 - MPMX20_01667 0.33 +0.5 1,766,095 - MPMX20_01667 0.39 -1.5 1,766,103 + MPMX20_01667 0.40 -1.2 1,766,129 - MPMX20_01667 0.43 -0.1 1,766,168 + MPMX20_01667 0.48 +0.2 1,766,176 - MPMX20_01667 0.49 +0.3 1,766,442 + MPMX20_01667 0.81 +0.8 1,766,442 + MPMX20_01667 0.81 -0.1 1,766,450 - MPMX20_01667 0.82 -1.7 1,766,465 + MPMX20_01667 0.83 +0.1 1,766,504 + MPMX20_01667 0.88 -1.0 1,766,587 + -1.7 1,766,587 + -0.5 1,766,595 - +0.1
Or see this region's nucleotide sequence