Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01666

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01664 and MPMX20_01665 overlap by 4 nucleotidesMPMX20_01665 and MPMX20_01666 are separated by 10 nucleotidesMPMX20_01666 and MPMX20_01667 are separated by 153 nucleotides MPMX20_01664: MPMX20_01664 - 1-carboxybiuret hydrolase subunit AtzE, at 1,762,434 to 1,763,831 _01664 MPMX20_01665: MPMX20_01665 - hypothetical protein, at 1,763,828 to 1,764,016 _01665 MPMX20_01666: MPMX20_01666 - Oxamate amidohydrolase proenzyme, at 1,764,027 to 1,765,610 _01666 MPMX20_01667: MPMX20_01667 - hypothetical protein, at 1,765,764 to 1,766,603 _01667 Position (kb) 1764 1765 1766Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1763.085 kb on + strand, within MPMX20_01664at 1763.093 kb on - strand, within MPMX20_01664at 1763.141 kb on - strand, within MPMX20_01664at 1763.203 kb on - strand, within MPMX20_01664at 1763.258 kb on - strand, within MPMX20_01664at 1763.331 kb on - strand, within MPMX20_01664at 1763.407 kb on - strand, within MPMX20_01664at 1763.493 kb on + strand, within MPMX20_01664at 1763.515 kb on - strand, within MPMX20_01664at 1763.542 kb on - strand, within MPMX20_01664at 1763.544 kb on + strand, within MPMX20_01664at 1763.544 kb on + strand, within MPMX20_01664at 1763.549 kb on + strand, within MPMX20_01664at 1763.549 kb on + strand, within MPMX20_01664at 1763.562 kb on - strand, within MPMX20_01664at 1763.708 kb on - strandat 1763.714 kb on - strandat 1763.737 kb on - strandat 1763.802 kb on - strandat 1763.825 kb on + strandat 1763.825 kb on + strandat 1763.842 kb on + strandat 1763.845 kb on - strandat 1763.920 kb on - strand, within MPMX20_01665at 1763.924 kb on - strand, within MPMX20_01665at 1763.950 kb on + strand, within MPMX20_01665at 1763.950 kb on + strand, within MPMX20_01665at 1763.953 kb on - strand, within MPMX20_01665at 1764.078 kb on - strandat 1764.078 kb on - strandat 1764.114 kb on + strandat 1764.114 kb on + strandat 1764.114 kb on + strandat 1764.206 kb on + strand, within MPMX20_01666at 1764.235 kb on - strand, within MPMX20_01666at 1764.237 kb on - strand, within MPMX20_01666at 1764.250 kb on - strand, within MPMX20_01666at 1764.270 kb on + strand, within MPMX20_01666at 1764.278 kb on + strand, within MPMX20_01666at 1764.278 kb on + strand, within MPMX20_01666at 1764.286 kb on - strand, within MPMX20_01666at 1764.293 kb on - strand, within MPMX20_01666at 1764.467 kb on - strand, within MPMX20_01666at 1764.620 kb on - strand, within MPMX20_01666at 1764.682 kb on + strand, within MPMX20_01666at 1764.718 kb on - strand, within MPMX20_01666at 1764.725 kb on - strand, within MPMX20_01666at 1764.796 kb on + strand, within MPMX20_01666at 1764.820 kb on - strand, within MPMX20_01666at 1764.864 kb on + strand, within MPMX20_01666at 1764.872 kb on - strand, within MPMX20_01666at 1764.943 kb on + strand, within MPMX20_01666at 1765.038 kb on - strand, within MPMX20_01666at 1765.040 kb on - strand, within MPMX20_01666at 1765.047 kb on + strand, within MPMX20_01666at 1765.130 kb on + strand, within MPMX20_01666at 1765.266 kb on - strand, within MPMX20_01666at 1765.313 kb on - strand, within MPMX20_01666at 1765.371 kb on - strand, within MPMX20_01666at 1765.375 kb on - strand, within MPMX20_01666at 1765.456 kb on + strandat 1765.476 kb on - strandat 1765.539 kb on + strandat 1765.547 kb on - strandat 1765.770 kb on - strandat 1765.812 kb on + strandat 1765.819 kb on + strandat 1765.819 kb on + strandat 1765.874 kb on - strand, within MPMX20_01667at 1765.876 kb on + strand, within MPMX20_01667at 1765.892 kb on + strand, within MPMX20_01667at 1765.900 kb on - strand, within MPMX20_01667at 1765.904 kb on + strand, within MPMX20_01667at 1765.943 kb on - strand, within MPMX20_01667at 1765.952 kb on + strand, within MPMX20_01667at 1765.959 kb on - strand, within MPMX20_01667at 1765.971 kb on + strand, within MPMX20_01667at 1765.989 kb on - strand, within MPMX20_01667at 1766.030 kb on + strand, within MPMX20_01667at 1766.035 kb on + strand, within MPMX20_01667at 1766.038 kb on - strand, within MPMX20_01667at 1766.038 kb on - strand, within MPMX20_01667at 1766.095 kb on - strand, within MPMX20_01667at 1766.103 kb on + strand, within MPMX20_01667at 1766.129 kb on - strand, within MPMX20_01667at 1766.168 kb on + strand, within MPMX20_01667at 1766.176 kb on - strand, within MPMX20_01667at 1766.442 kb on + strand, within MPMX20_01667at 1766.442 kb on + strand, within MPMX20_01667at 1766.450 kb on - strand, within MPMX20_01667at 1766.465 kb on + strand, within MPMX20_01667at 1766.504 kb on + strand, within MPMX20_01667at 1766.587 kb on + strandat 1766.587 kb on + strandat 1766.595 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,763,085 + MPMX20_01664 0.47 +0.9
1,763,093 - MPMX20_01664 0.47 +0.1
1,763,141 - MPMX20_01664 0.51 +0.6
1,763,203 - MPMX20_01664 0.55 +0.1
1,763,258 - MPMX20_01664 0.59 +0.5
1,763,331 - MPMX20_01664 0.64 -2.2
1,763,407 - MPMX20_01664 0.70 +2.0
1,763,493 + MPMX20_01664 0.76 +2.7
1,763,515 - MPMX20_01664 0.77 -0.6
1,763,542 - MPMX20_01664 0.79 +0.7
1,763,544 + MPMX20_01664 0.79 +0.9
1,763,544 + MPMX20_01664 0.79 +1.1
1,763,549 + MPMX20_01664 0.80 -1.8
1,763,549 + MPMX20_01664 0.80 +0.4
1,763,562 - MPMX20_01664 0.81 -0.5
1,763,708 - -1.3
1,763,714 - -0.9
1,763,737 - +0.0
1,763,802 - -1.5
1,763,825 + +1.1
1,763,825 + +3.1
1,763,842 + +1.7
1,763,845 - +1.3
1,763,920 - MPMX20_01665 0.49 -1.3
1,763,924 - MPMX20_01665 0.51 -1.4
1,763,950 + MPMX20_01665 0.65 +0.7
1,763,950 + MPMX20_01665 0.65 -1.1
1,763,953 - MPMX20_01665 0.66 -0.7
1,764,078 - -1.4
1,764,078 - +0.5
1,764,114 + -0.4
1,764,114 + -0.9
1,764,114 + +1.7
1,764,206 + MPMX20_01666 0.11 +1.0
1,764,235 - MPMX20_01666 0.13 -0.3
1,764,237 - MPMX20_01666 0.13 -0.9
1,764,250 - MPMX20_01666 0.14 +1.7
1,764,270 + MPMX20_01666 0.15 +1.7
1,764,278 + MPMX20_01666 0.16 -0.3
1,764,278 + MPMX20_01666 0.16 +0.9
1,764,286 - MPMX20_01666 0.16 -0.2
1,764,293 - MPMX20_01666 0.17 -0.7
1,764,467 - MPMX20_01666 0.28 +0.7
1,764,620 - MPMX20_01666 0.37 -0.9
1,764,682 + MPMX20_01666 0.41 -0.4
1,764,718 - MPMX20_01666 0.44 -1.5
1,764,725 - MPMX20_01666 0.44 +0.3
1,764,796 + MPMX20_01666 0.49 +0.4
1,764,820 - MPMX20_01666 0.50 +0.5
1,764,864 + MPMX20_01666 0.53 -0.8
1,764,872 - MPMX20_01666 0.53 +0.2
1,764,943 + MPMX20_01666 0.58 +0.4
1,765,038 - MPMX20_01666 0.64 -0.1
1,765,040 - MPMX20_01666 0.64 +0.2
1,765,047 + MPMX20_01666 0.64 +1.4
1,765,130 + MPMX20_01666 0.70 -0.4
1,765,266 - MPMX20_01666 0.78 -1.0
1,765,313 - MPMX20_01666 0.81 -1.9
1,765,371 - MPMX20_01666 0.85 +1.7
1,765,375 - MPMX20_01666 0.85 +1.4
1,765,456 + +0.4
1,765,476 - +1.0
1,765,539 + +0.8
1,765,547 - +0.0
1,765,770 - +0.6
1,765,812 + -0.8
1,765,819 + -1.0
1,765,819 + +1.6
1,765,874 - MPMX20_01667 0.13 +0.9
1,765,876 + MPMX20_01667 0.13 -0.9
1,765,892 + MPMX20_01667 0.15 +3.3
1,765,900 - MPMX20_01667 0.16 -0.4
1,765,904 + MPMX20_01667 0.17 -0.6
1,765,943 - MPMX20_01667 0.21 -0.4
1,765,952 + MPMX20_01667 0.22 +0.3
1,765,959 - MPMX20_01667 0.23 -0.2
1,765,971 + MPMX20_01667 0.25 -1.9
1,765,989 - MPMX20_01667 0.27 +1.4
1,766,030 + MPMX20_01667 0.32 +0.0
1,766,035 + MPMX20_01667 0.32 -0.3
1,766,038 - MPMX20_01667 0.33 +0.4
1,766,038 - MPMX20_01667 0.33 +0.5
1,766,095 - MPMX20_01667 0.39 -1.5
1,766,103 + MPMX20_01667 0.40 -1.2
1,766,129 - MPMX20_01667 0.43 -0.1
1,766,168 + MPMX20_01667 0.48 +0.2
1,766,176 - MPMX20_01667 0.49 +0.3
1,766,442 + MPMX20_01667 0.81 +0.8
1,766,442 + MPMX20_01667 0.81 -0.1
1,766,450 - MPMX20_01667 0.82 -1.7
1,766,465 + MPMX20_01667 0.83 +0.1
1,766,504 + MPMX20_01667 0.88 -1.0
1,766,587 + -1.7
1,766,587 + -0.5
1,766,595 - +0.1

Or see this region's nucleotide sequence