Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01663

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01662 and MPMX20_01663 are separated by 90 nucleotidesMPMX20_01663 and MPMX20_01664 overlap by 4 nucleotides MPMX20_01662: MPMX20_01662 - hypothetical protein, at 1,761,028 to 1,761,960 _01662 MPMX20_01663: MPMX20_01663 - hypothetical protein, at 1,762,051 to 1,762,437 _01663 MPMX20_01664: MPMX20_01664 - 1-carboxybiuret hydrolase subunit AtzE, at 1,762,434 to 1,763,831 _01664 Position (kb) 1762 1763Strain fitness (log2 ratio) -2 -1 0 1 2at 1761.106 kb on - strandat 1761.130 kb on + strand, within MPMX20_01662at 1761.190 kb on - strand, within MPMX20_01662at 1761.291 kb on - strand, within MPMX20_01662at 1761.391 kb on + strand, within MPMX20_01662at 1761.468 kb on + strand, within MPMX20_01662at 1761.468 kb on + strand, within MPMX20_01662at 1761.476 kb on - strand, within MPMX20_01662at 1761.476 kb on - strand, within MPMX20_01662at 1761.484 kb on + strand, within MPMX20_01662at 1761.588 kb on - strand, within MPMX20_01662at 1761.603 kb on - strand, within MPMX20_01662at 1761.633 kb on - strand, within MPMX20_01662at 1761.661 kb on - strand, within MPMX20_01662at 1761.664 kb on + strand, within MPMX20_01662at 1761.717 kb on + strand, within MPMX20_01662at 1761.723 kb on - strand, within MPMX20_01662at 1761.735 kb on + strand, within MPMX20_01662at 1761.735 kb on + strand, within MPMX20_01662at 1761.743 kb on - strand, within MPMX20_01662at 1761.780 kb on + strand, within MPMX20_01662at 1761.875 kb on + strandat 1761.880 kb on + strandat 1761.900 kb on + strandat 1761.900 kb on + strandat 1761.905 kb on + strandat 1761.913 kb on - strandat 1761.963 kb on + strandat 1761.971 kb on - strandat 1761.993 kb on - strandat 1762.003 kb on - strandat 1762.039 kb on + strandat 1762.049 kb on - strandat 1762.074 kb on - strandat 1762.074 kb on - strandat 1762.172 kb on + strand, within MPMX20_01663at 1762.172 kb on + strand, within MPMX20_01663at 1762.180 kb on - strand, within MPMX20_01663at 1762.180 kb on - strand, within MPMX20_01663at 1762.180 kb on - strand, within MPMX20_01663at 1762.180 kb on - strand, within MPMX20_01663at 1762.181 kb on + strand, within MPMX20_01663at 1762.271 kb on + strand, within MPMX20_01663at 1762.286 kb on - strand, within MPMX20_01663at 1762.298 kb on - strand, within MPMX20_01663at 1762.316 kb on + strand, within MPMX20_01663at 1762.324 kb on - strand, within MPMX20_01663at 1762.346 kb on - strand, within MPMX20_01663at 1762.357 kb on - strand, within MPMX20_01663at 1762.375 kb on + strand, within MPMX20_01663at 1762.381 kb on - strand, within MPMX20_01663at 1762.388 kb on - strand, within MPMX20_01663at 1762.421 kb on - strandat 1762.579 kb on - strand, within MPMX20_01664at 1762.623 kb on + strand, within MPMX20_01664at 1762.640 kb on - strand, within MPMX20_01664at 1762.818 kb on - strand, within MPMX20_01664at 1762.863 kb on - strand, within MPMX20_01664at 1762.929 kb on - strand, within MPMX20_01664at 1762.973 kb on - strand, within MPMX20_01664at 1762.973 kb on - strand, within MPMX20_01664at 1763.085 kb on + strand, within MPMX20_01664at 1763.093 kb on - strand, within MPMX20_01664at 1763.141 kb on - strand, within MPMX20_01664at 1763.203 kb on - strand, within MPMX20_01664at 1763.258 kb on - strand, within MPMX20_01664at 1763.331 kb on - strand, within MPMX20_01664at 1763.407 kb on - strand, within MPMX20_01664

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,761,106 - -0.6
1,761,130 + MPMX20_01662 0.11 -0.1
1,761,190 - MPMX20_01662 0.17 +0.2
1,761,291 - MPMX20_01662 0.28 -0.4
1,761,391 + MPMX20_01662 0.39 -0.4
1,761,468 + MPMX20_01662 0.47 -0.7
1,761,468 + MPMX20_01662 0.47 -0.2
1,761,476 - MPMX20_01662 0.48 -0.5
1,761,476 - MPMX20_01662 0.48 +0.6
1,761,484 + MPMX20_01662 0.49 -1.7
1,761,588 - MPMX20_01662 0.60 +0.5
1,761,603 - MPMX20_01662 0.62 +1.7
1,761,633 - MPMX20_01662 0.65 -0.4
1,761,661 - MPMX20_01662 0.68 -0.7
1,761,664 + MPMX20_01662 0.68 +0.1
1,761,717 + MPMX20_01662 0.74 +0.1
1,761,723 - MPMX20_01662 0.74 -1.9
1,761,735 + MPMX20_01662 0.76 -1.2
1,761,735 + MPMX20_01662 0.76 -0.6
1,761,743 - MPMX20_01662 0.77 -0.6
1,761,780 + MPMX20_01662 0.81 -1.3
1,761,875 + +0.7
1,761,880 + +0.3
1,761,900 + -0.1
1,761,900 + +0.6
1,761,905 + +1.5
1,761,913 - +1.1
1,761,963 + -0.3
1,761,971 - -1.0
1,761,993 - -1.1
1,762,003 - -2.2
1,762,039 + +0.4
1,762,049 - -1.8
1,762,074 - -0.0
1,762,074 - +0.1
1,762,172 + MPMX20_01663 0.31 -1.5
1,762,172 + MPMX20_01663 0.31 -0.9
1,762,180 - MPMX20_01663 0.33 -1.4
1,762,180 - MPMX20_01663 0.33 +1.7
1,762,180 - MPMX20_01663 0.33 +2.7
1,762,180 - MPMX20_01663 0.33 -0.6
1,762,181 + MPMX20_01663 0.34 +0.7
1,762,271 + MPMX20_01663 0.57 +1.0
1,762,286 - MPMX20_01663 0.61 +0.0
1,762,298 - MPMX20_01663 0.64 -0.5
1,762,316 + MPMX20_01663 0.68 +1.7
1,762,324 - MPMX20_01663 0.71 -0.2
1,762,346 - MPMX20_01663 0.76 -0.1
1,762,357 - MPMX20_01663 0.79 -0.3
1,762,375 + MPMX20_01663 0.84 -0.5
1,762,381 - MPMX20_01663 0.85 +1.0
1,762,388 - MPMX20_01663 0.87 -0.6
1,762,421 - -0.2
1,762,579 - MPMX20_01664 0.10 -1.9
1,762,623 + MPMX20_01664 0.14 +0.3
1,762,640 - MPMX20_01664 0.15 -1.7
1,762,818 - MPMX20_01664 0.27 -1.4
1,762,863 - MPMX20_01664 0.31 +0.4
1,762,929 - MPMX20_01664 0.35 -1.3
1,762,973 - MPMX20_01664 0.39 +0.7
1,762,973 - MPMX20_01664 0.39 -0.7
1,763,085 + MPMX20_01664 0.47 +0.9
1,763,093 - MPMX20_01664 0.47 +0.1
1,763,141 - MPMX20_01664 0.51 +0.6
1,763,203 - MPMX20_01664 0.55 +0.1
1,763,258 - MPMX20_01664 0.59 +0.5
1,763,331 - MPMX20_01664 0.64 -2.2
1,763,407 - MPMX20_01664 0.70 +2.0

Or see this region's nucleotide sequence