Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01470 and MPMX20_01471 are separated by 45 nucleotides MPMX20_01471 and MPMX20_01472 are separated by 1 nucleotides MPMX20_01472 and MPMX20_01473 are separated by 51 nucleotides
MPMX20_01470: MPMX20_01470 - Glutathione-binding protein GsiB, at 1,540,575 to 1,542,113
_01470
MPMX20_01471: MPMX20_01471 - Glutathione transport system permease protein GsiC, at 1,542,159 to 1,543,079
_01471
MPMX20_01472: MPMX20_01472 - Glutathione transport system permease protein GsiD, at 1,543,081 to 1,543,992
_01472
MPMX20_01473: MPMX20_01473 - Ribosomal protein S12 methylthiotransferase RimO, at 1,544,044 to 1,545,369
_01473
Position (kb)
1542
1543
1544 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1541.183 kb on - strand, within MPMX20_01470 at 1541.191 kb on - strand, within MPMX20_01470 at 1541.224 kb on + strand, within MPMX20_01470 at 1541.232 kb on - strand, within MPMX20_01470 at 1541.308 kb on + strand, within MPMX20_01470 at 1541.344 kb on + strand, within MPMX20_01470 at 1541.391 kb on - strand, within MPMX20_01470 at 1541.549 kb on + strand, within MPMX20_01470 at 1541.585 kb on + strand, within MPMX20_01470 at 1541.611 kb on + strand, within MPMX20_01470 at 1541.719 kb on - strand, within MPMX20_01470 at 1541.891 kb on - strand, within MPMX20_01470 at 1541.941 kb on + strand, within MPMX20_01470 at 1541.949 kb on - strand, within MPMX20_01470 at 1541.963 kb on + strand at 1541.963 kb on + strand at 1541.970 kb on - strand at 1541.971 kb on - strand at 1541.980 kb on - strand at 1542.041 kb on + strand at 1542.051 kb on - strand at 1542.056 kb on - strand at 1542.326 kb on - strand, within MPMX20_01471 at 1542.343 kb on - strand, within MPMX20_01471 at 1542.380 kb on - strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.394 kb on + strand, within MPMX20_01471 at 1542.464 kb on - strand, within MPMX20_01471 at 1542.494 kb on - strand, within MPMX20_01471 at 1542.551 kb on + strand, within MPMX20_01471 at 1542.551 kb on + strand, within MPMX20_01471 at 1542.559 kb on - strand, within MPMX20_01471 at 1542.559 kb on - strand, within MPMX20_01471 at 1542.561 kb on - strand, within MPMX20_01471 at 1542.625 kb on - strand, within MPMX20_01471 at 1542.630 kb on + strand, within MPMX20_01471 at 1542.633 kb on - strand, within MPMX20_01471 at 1542.638 kb on - strand, within MPMX20_01471 at 1542.664 kb on + strand, within MPMX20_01471 at 1542.680 kb on - strand, within MPMX20_01471 at 1542.698 kb on + strand, within MPMX20_01471 at 1542.725 kb on - strand, within MPMX20_01471 at 1542.789 kb on + strand, within MPMX20_01471 at 1542.793 kb on - strand, within MPMX20_01471 at 1542.811 kb on - strand, within MPMX20_01471 at 1542.850 kb on - strand, within MPMX20_01471 at 1542.908 kb on - strand, within MPMX20_01471 at 1542.912 kb on + strand, within MPMX20_01471 at 1542.912 kb on + strand, within MPMX20_01471 at 1542.920 kb on - strand, within MPMX20_01471 at 1542.954 kb on + strand, within MPMX20_01471 at 1543.040 kb on + strand at 1543.040 kb on + strand at 1543.059 kb on - strand at 1543.323 kb on + strand, within MPMX20_01472 at 1543.499 kb on + strand, within MPMX20_01472 at 1543.580 kb on - strand, within MPMX20_01472 at 1543.599 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.682 kb on + strand, within MPMX20_01472 at 1543.690 kb on - strand, within MPMX20_01472 at 1543.690 kb on - strand, within MPMX20_01472 at 1543.705 kb on + strand, within MPMX20_01472 at 1543.715 kb on + strand, within MPMX20_01472 at 1543.725 kb on + strand, within MPMX20_01472 at 1543.764 kb on + strand, within MPMX20_01472 at 1543.934 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,541,183 - MPMX20_01470 0.40 -0.5 1,541,191 - MPMX20_01470 0.40 -1.0 1,541,224 + MPMX20_01470 0.42 +0.2 1,541,232 - MPMX20_01470 0.43 -0.1 1,541,308 + MPMX20_01470 0.48 +2.0 1,541,344 + MPMX20_01470 0.50 -1.9 1,541,391 - MPMX20_01470 0.53 -1.7 1,541,549 + MPMX20_01470 0.63 +1.3 1,541,585 + MPMX20_01470 0.66 +0.7 1,541,611 + MPMX20_01470 0.67 +1.4 1,541,719 - MPMX20_01470 0.74 -0.1 1,541,891 - MPMX20_01470 0.86 -0.2 1,541,941 + MPMX20_01470 0.89 +0.8 1,541,949 - MPMX20_01470 0.89 -0.9 1,541,963 + +2.1 1,541,963 + +4.0 1,541,970 - +0.9 1,541,971 - +0.3 1,541,980 - -0.4 1,542,041 + +1.9 1,542,051 - +0.5 1,542,056 - -0.2 1,542,326 - MPMX20_01471 0.18 -1.5 1,542,343 - MPMX20_01471 0.20 -0.7 1,542,380 - MPMX20_01471 0.24 -1.0 1,542,394 + MPMX20_01471 0.26 -1.9 1,542,394 + MPMX20_01471 0.26 +0.1 1,542,394 + MPMX20_01471 0.26 -2.0 1,542,464 - MPMX20_01471 0.33 +2.8 1,542,494 - MPMX20_01471 0.36 +0.5 1,542,551 + MPMX20_01471 0.43 -1.4 1,542,551 + MPMX20_01471 0.43 -0.8 1,542,559 - MPMX20_01471 0.43 +0.8 1,542,559 - MPMX20_01471 0.43 +0.8 1,542,561 - MPMX20_01471 0.44 -0.4 1,542,625 - MPMX20_01471 0.51 -0.6 1,542,630 + MPMX20_01471 0.51 -1.6 1,542,633 - MPMX20_01471 0.51 -0.3 1,542,638 - MPMX20_01471 0.52 -0.6 1,542,664 + MPMX20_01471 0.55 -2.4 1,542,680 - MPMX20_01471 0.57 +0.8 1,542,698 + MPMX20_01471 0.59 +3.8 1,542,725 - MPMX20_01471 0.61 -0.5 1,542,789 + MPMX20_01471 0.68 -1.0 1,542,793 - MPMX20_01471 0.69 +0.1 1,542,811 - MPMX20_01471 0.71 -1.8 1,542,850 - MPMX20_01471 0.75 -2.5 1,542,908 - MPMX20_01471 0.81 +0.7 1,542,912 + MPMX20_01471 0.82 -1.9 1,542,912 + MPMX20_01471 0.82 -0.4 1,542,920 - MPMX20_01471 0.83 -0.9 1,542,954 + MPMX20_01471 0.86 -0.7 1,543,040 + -0.8 1,543,040 + -1.9 1,543,059 - +0.3 1,543,323 + MPMX20_01472 0.27 -0.8 1,543,499 + MPMX20_01472 0.46 -0.5 1,543,580 - MPMX20_01472 0.55 +0.5 1,543,599 + MPMX20_01472 0.57 +0.5 1,543,682 + MPMX20_01472 0.66 -0.4 1,543,682 + MPMX20_01472 0.66 -0.8 1,543,682 + MPMX20_01472 0.66 -1.7 1,543,690 - MPMX20_01472 0.67 -0.0 1,543,690 - MPMX20_01472 0.67 +0.3 1,543,705 + MPMX20_01472 0.68 +0.5 1,543,715 + MPMX20_01472 0.70 -0.0 1,543,725 + MPMX20_01472 0.71 -0.5 1,543,764 + MPMX20_01472 0.75 -0.2 1,543,934 + -0.0
Or see this region's nucleotide sequence