Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01471

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01470 and MPMX20_01471 are separated by 45 nucleotidesMPMX20_01471 and MPMX20_01472 are separated by 1 nucleotidesMPMX20_01472 and MPMX20_01473 are separated by 51 nucleotides MPMX20_01470: MPMX20_01470 - Glutathione-binding protein GsiB, at 1,540,575 to 1,542,113 _01470 MPMX20_01471: MPMX20_01471 - Glutathione transport system permease protein GsiC, at 1,542,159 to 1,543,079 _01471 MPMX20_01472: MPMX20_01472 - Glutathione transport system permease protein GsiD, at 1,543,081 to 1,543,992 _01472 MPMX20_01473: MPMX20_01473 - Ribosomal protein S12 methylthiotransferase RimO, at 1,544,044 to 1,545,369 _01473 Position (kb) 1542 1543 1544Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1541.183 kb on - strand, within MPMX20_01470at 1541.191 kb on - strand, within MPMX20_01470at 1541.224 kb on + strand, within MPMX20_01470at 1541.232 kb on - strand, within MPMX20_01470at 1541.308 kb on + strand, within MPMX20_01470at 1541.344 kb on + strand, within MPMX20_01470at 1541.391 kb on - strand, within MPMX20_01470at 1541.549 kb on + strand, within MPMX20_01470at 1541.585 kb on + strand, within MPMX20_01470at 1541.611 kb on + strand, within MPMX20_01470at 1541.719 kb on - strand, within MPMX20_01470at 1541.891 kb on - strand, within MPMX20_01470at 1541.941 kb on + strand, within MPMX20_01470at 1541.949 kb on - strand, within MPMX20_01470at 1541.963 kb on + strandat 1541.963 kb on + strandat 1541.970 kb on - strandat 1541.971 kb on - strandat 1541.980 kb on - strandat 1542.041 kb on + strandat 1542.051 kb on - strandat 1542.056 kb on - strandat 1542.326 kb on - strand, within MPMX20_01471at 1542.343 kb on - strand, within MPMX20_01471at 1542.380 kb on - strand, within MPMX20_01471at 1542.394 kb on + strand, within MPMX20_01471at 1542.394 kb on + strand, within MPMX20_01471at 1542.394 kb on + strand, within MPMX20_01471at 1542.464 kb on - strand, within MPMX20_01471at 1542.494 kb on - strand, within MPMX20_01471at 1542.551 kb on + strand, within MPMX20_01471at 1542.551 kb on + strand, within MPMX20_01471at 1542.559 kb on - strand, within MPMX20_01471at 1542.559 kb on - strand, within MPMX20_01471at 1542.561 kb on - strand, within MPMX20_01471at 1542.625 kb on - strand, within MPMX20_01471at 1542.630 kb on + strand, within MPMX20_01471at 1542.633 kb on - strand, within MPMX20_01471at 1542.638 kb on - strand, within MPMX20_01471at 1542.664 kb on + strand, within MPMX20_01471at 1542.680 kb on - strand, within MPMX20_01471at 1542.698 kb on + strand, within MPMX20_01471at 1542.725 kb on - strand, within MPMX20_01471at 1542.789 kb on + strand, within MPMX20_01471at 1542.793 kb on - strand, within MPMX20_01471at 1542.811 kb on - strand, within MPMX20_01471at 1542.850 kb on - strand, within MPMX20_01471at 1542.908 kb on - strand, within MPMX20_01471at 1542.912 kb on + strand, within MPMX20_01471at 1542.912 kb on + strand, within MPMX20_01471at 1542.920 kb on - strand, within MPMX20_01471at 1542.954 kb on + strand, within MPMX20_01471at 1543.040 kb on + strandat 1543.040 kb on + strandat 1543.059 kb on - strandat 1543.323 kb on + strand, within MPMX20_01472at 1543.499 kb on + strand, within MPMX20_01472at 1543.580 kb on - strand, within MPMX20_01472at 1543.599 kb on + strand, within MPMX20_01472at 1543.682 kb on + strand, within MPMX20_01472at 1543.682 kb on + strand, within MPMX20_01472at 1543.682 kb on + strand, within MPMX20_01472at 1543.690 kb on - strand, within MPMX20_01472at 1543.690 kb on - strand, within MPMX20_01472at 1543.705 kb on + strand, within MPMX20_01472at 1543.715 kb on + strand, within MPMX20_01472at 1543.725 kb on + strand, within MPMX20_01472at 1543.764 kb on + strand, within MPMX20_01472at 1543.934 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,541,183 - MPMX20_01470 0.40 -0.5
1,541,191 - MPMX20_01470 0.40 -1.0
1,541,224 + MPMX20_01470 0.42 +0.2
1,541,232 - MPMX20_01470 0.43 -0.1
1,541,308 + MPMX20_01470 0.48 +2.0
1,541,344 + MPMX20_01470 0.50 -1.9
1,541,391 - MPMX20_01470 0.53 -1.7
1,541,549 + MPMX20_01470 0.63 +1.3
1,541,585 + MPMX20_01470 0.66 +0.7
1,541,611 + MPMX20_01470 0.67 +1.4
1,541,719 - MPMX20_01470 0.74 -0.1
1,541,891 - MPMX20_01470 0.86 -0.2
1,541,941 + MPMX20_01470 0.89 +0.8
1,541,949 - MPMX20_01470 0.89 -0.9
1,541,963 + +2.1
1,541,963 + +4.0
1,541,970 - +0.9
1,541,971 - +0.3
1,541,980 - -0.4
1,542,041 + +1.9
1,542,051 - +0.5
1,542,056 - -0.2
1,542,326 - MPMX20_01471 0.18 -1.5
1,542,343 - MPMX20_01471 0.20 -0.7
1,542,380 - MPMX20_01471 0.24 -1.0
1,542,394 + MPMX20_01471 0.26 -1.9
1,542,394 + MPMX20_01471 0.26 +0.1
1,542,394 + MPMX20_01471 0.26 -2.0
1,542,464 - MPMX20_01471 0.33 +2.8
1,542,494 - MPMX20_01471 0.36 +0.5
1,542,551 + MPMX20_01471 0.43 -1.4
1,542,551 + MPMX20_01471 0.43 -0.8
1,542,559 - MPMX20_01471 0.43 +0.8
1,542,559 - MPMX20_01471 0.43 +0.8
1,542,561 - MPMX20_01471 0.44 -0.4
1,542,625 - MPMX20_01471 0.51 -0.6
1,542,630 + MPMX20_01471 0.51 -1.6
1,542,633 - MPMX20_01471 0.51 -0.3
1,542,638 - MPMX20_01471 0.52 -0.6
1,542,664 + MPMX20_01471 0.55 -2.4
1,542,680 - MPMX20_01471 0.57 +0.8
1,542,698 + MPMX20_01471 0.59 +3.8
1,542,725 - MPMX20_01471 0.61 -0.5
1,542,789 + MPMX20_01471 0.68 -1.0
1,542,793 - MPMX20_01471 0.69 +0.1
1,542,811 - MPMX20_01471 0.71 -1.8
1,542,850 - MPMX20_01471 0.75 -2.5
1,542,908 - MPMX20_01471 0.81 +0.7
1,542,912 + MPMX20_01471 0.82 -1.9
1,542,912 + MPMX20_01471 0.82 -0.4
1,542,920 - MPMX20_01471 0.83 -0.9
1,542,954 + MPMX20_01471 0.86 -0.7
1,543,040 + -0.8
1,543,040 + -1.9
1,543,059 - +0.3
1,543,323 + MPMX20_01472 0.27 -0.8
1,543,499 + MPMX20_01472 0.46 -0.5
1,543,580 - MPMX20_01472 0.55 +0.5
1,543,599 + MPMX20_01472 0.57 +0.5
1,543,682 + MPMX20_01472 0.66 -0.4
1,543,682 + MPMX20_01472 0.66 -0.8
1,543,682 + MPMX20_01472 0.66 -1.7
1,543,690 - MPMX20_01472 0.67 -0.0
1,543,690 - MPMX20_01472 0.67 +0.3
1,543,705 + MPMX20_01472 0.68 +0.5
1,543,715 + MPMX20_01472 0.70 -0.0
1,543,725 + MPMX20_01472 0.71 -0.5
1,543,764 + MPMX20_01472 0.75 -0.2
1,543,934 + -0.0

Or see this region's nucleotide sequence