Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01445 and MPMX20_01446 are separated by 283 nucleotides MPMX20_01446 and MPMX20_01447 are separated by 183 nucleotides MPMX20_01447 and MPMX20_01448 overlap by 4 nucleotides
MPMX20_01445: MPMX20_01445 - Phosphoethanolamine transferase OpgE, at 1,508,258 to 1,509,841
_01445
MPMX20_01446: MPMX20_01446 - Small protein MntS, at 1,510,125 to 1,510,256
_01446
MPMX20_01447: MPMX20_01447 - Transcriptional regulator MntR, at 1,510,440 to 1,510,913
_01447
MPMX20_01448: MPMX20_01448 - Inner membrane protein YbiR, at 1,510,910 to 1,512,019
_01448
Position (kb)
1510
1511 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1509.133 kb on - strand, within MPMX20_01445 at 1509.174 kb on + strand, within MPMX20_01445 at 1509.192 kb on - strand, within MPMX20_01445 at 1509.200 kb on - strand, within MPMX20_01445 at 1509.222 kb on + strand, within MPMX20_01445 at 1509.285 kb on - strand, within MPMX20_01445 at 1509.317 kb on - strand, within MPMX20_01445 at 1509.357 kb on - strand, within MPMX20_01445 at 1509.362 kb on - strand, within MPMX20_01445 at 1509.362 kb on - strand, within MPMX20_01445 at 1509.394 kb on - strand, within MPMX20_01445 at 1509.416 kb on - strand, within MPMX20_01445 at 1509.493 kb on - strand, within MPMX20_01445 at 1509.544 kb on + strand, within MPMX20_01445 at 1509.552 kb on - strand, within MPMX20_01445 at 1509.552 kb on - strand, within MPMX20_01445 at 1509.576 kb on + strand, within MPMX20_01445 at 1509.584 kb on - strand, within MPMX20_01445 at 1509.594 kb on + strand, within MPMX20_01445 at 1509.602 kb on - strand, within MPMX20_01445 at 1509.602 kb on - strand, within MPMX20_01445 at 1509.602 kb on - strand, within MPMX20_01445 at 1509.607 kb on - strand, within MPMX20_01445 at 1509.701 kb on + strand at 1509.709 kb on - strand at 1509.714 kb on + strand at 1509.714 kb on + strand at 1509.719 kb on + strand at 1509.722 kb on - strand at 1509.722 kb on - strand at 1509.722 kb on - strand at 1509.724 kb on + strand at 1509.724 kb on + strand at 1509.732 kb on - strand at 1509.732 kb on - strand at 1509.732 kb on - strand at 1509.781 kb on - strand at 1509.790 kb on + strand at 1509.798 kb on - strand at 1509.811 kb on - strand at 1509.817 kb on - strand at 1509.844 kb on - strand at 1509.870 kb on + strand at 1509.889 kb on - strand at 1509.890 kb on + strand at 1509.891 kb on + strand at 1509.891 kb on + strand at 1509.891 kb on + strand at 1509.898 kb on - strand at 1509.899 kb on - strand at 1509.901 kb on + strand at 1509.901 kb on + strand at 1509.909 kb on - strand at 1509.930 kb on - strand at 1509.962 kb on - strand at 1509.975 kb on - strand at 1510.022 kb on - strand at 1510.062 kb on + strand at 1510.116 kb on - strand at 1510.121 kb on - strand at 1510.128 kb on + strand at 1510.136 kb on - strand at 1510.149 kb on + strand, within MPMX20_01446 at 1510.151 kb on - strand, within MPMX20_01446 at 1510.185 kb on + strand, within MPMX20_01446 at 1510.295 kb on - strand at 1510.332 kb on - strand at 1510.379 kb on + strand at 1510.435 kb on + strand at 1510.435 kb on + strand at 1510.513 kb on - strand, within MPMX20_01447 at 1510.541 kb on - strand, within MPMX20_01447 at 1510.548 kb on - strand, within MPMX20_01447 at 1510.548 kb on - strand, within MPMX20_01447 at 1510.561 kb on + strand, within MPMX20_01447 at 1510.678 kb on + strand, within MPMX20_01447 at 1510.678 kb on + strand, within MPMX20_01447 at 1510.678 kb on + strand, within MPMX20_01447 at 1510.686 kb on - strand, within MPMX20_01447 at 1510.740 kb on - strand, within MPMX20_01447 at 1510.751 kb on - strand, within MPMX20_01447 at 1510.891 kb on + strand at 1510.925 kb on + strand at 1510.974 kb on + strand at 1510.979 kb on + strand at 1510.979 kb on + strand at 1510.979 kb on + strand at 1510.979 kb on + strand at 1510.989 kb on + strand at 1510.997 kb on - strand at 1511.011 kb on + strand at 1511.011 kb on + strand at 1511.011 kb on + strand at 1511.011 kb on + strand at 1511.011 kb on + strand at 1511.019 kb on - strand at 1511.019 kb on - strand at 1511.019 kb on - strand at 1511.024 kb on + strand, within MPMX20_01448 at 1511.043 kb on + strand, within MPMX20_01448 at 1511.079 kb on + strand, within MPMX20_01448 at 1511.079 kb on + strand, within MPMX20_01448 at 1511.087 kb on - strand, within MPMX20_01448 at 1511.158 kb on + strand, within MPMX20_01448 at 1511.165 kb on - strand, within MPMX20_01448 at 1511.165 kb on - strand, within MPMX20_01448 at 1511.167 kb on + strand, within MPMX20_01448 at 1511.213 kb on - strand, within MPMX20_01448 at 1511.213 kb on - strand, within MPMX20_01448 at 1511.215 kb on + strand, within MPMX20_01448 at 1511.215 kb on + strand, within MPMX20_01448 at 1511.215 kb on + strand, within MPMX20_01448 at 1511.245 kb on + strand, within MPMX20_01448
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,509,133 - MPMX20_01445 0.55 -0.7 1,509,174 + MPMX20_01445 0.58 -1.6 1,509,192 - MPMX20_01445 0.59 +1.4 1,509,200 - MPMX20_01445 0.59 +0.3 1,509,222 + MPMX20_01445 0.61 -0.6 1,509,285 - MPMX20_01445 0.65 +1.2 1,509,317 - MPMX20_01445 0.67 -0.5 1,509,357 - MPMX20_01445 0.69 +0.1 1,509,362 - MPMX20_01445 0.70 +0.8 1,509,362 - MPMX20_01445 0.70 +0.3 1,509,394 - MPMX20_01445 0.72 +2.8 1,509,416 - MPMX20_01445 0.73 -1.4 1,509,493 - MPMX20_01445 0.78 -0.9 1,509,544 + MPMX20_01445 0.81 +0.3 1,509,552 - MPMX20_01445 0.82 +1.9 1,509,552 - MPMX20_01445 0.82 -0.4 1,509,576 + MPMX20_01445 0.83 -0.8 1,509,584 - MPMX20_01445 0.84 -0.2 1,509,594 + MPMX20_01445 0.84 -2.0 1,509,602 - MPMX20_01445 0.85 +0.6 1,509,602 - MPMX20_01445 0.85 +1.7 1,509,602 - MPMX20_01445 0.85 -0.2 1,509,607 - MPMX20_01445 0.85 -0.3 1,509,701 + -1.1 1,509,709 - -2.6 1,509,714 + +0.1 1,509,714 + -0.4 1,509,719 + -0.9 1,509,722 - -0.8 1,509,722 - -0.1 1,509,722 - -1.3 1,509,724 + -0.3 1,509,724 + -0.4 1,509,732 - -1.5 1,509,732 - -0.4 1,509,732 - +1.2 1,509,781 - -0.3 1,509,790 + +0.6 1,509,798 - +1.3 1,509,811 - -1.9 1,509,817 - -0.6 1,509,844 - +1.2 1,509,870 + +0.1 1,509,889 - -0.4 1,509,890 + -0.2 1,509,891 + +0.2 1,509,891 + -0.4 1,509,891 + -1.8 1,509,898 - -1.9 1,509,899 - -0.6 1,509,901 + -0.5 1,509,901 + -1.2 1,509,909 - +1.2 1,509,930 - -0.3 1,509,962 - -1.3 1,509,975 - +1.5 1,510,022 - -0.4 1,510,062 + +0.2 1,510,116 - -0.4 1,510,121 - -1.4 1,510,128 + -1.5 1,510,136 - +0.1 1,510,149 + MPMX20_01446 0.18 -1.8 1,510,151 - MPMX20_01446 0.20 -0.4 1,510,185 + MPMX20_01446 0.45 -0.3 1,510,295 - -1.9 1,510,332 - +0.3 1,510,379 + +1.1 1,510,435 + -0.4 1,510,435 + -1.3 1,510,513 - MPMX20_01447 0.15 -0.1 1,510,541 - MPMX20_01447 0.21 +0.2 1,510,548 - MPMX20_01447 0.23 +0.3 1,510,548 - MPMX20_01447 0.23 -0.4 1,510,561 + MPMX20_01447 0.26 -0.9 1,510,678 + MPMX20_01447 0.50 +0.5 1,510,678 + MPMX20_01447 0.50 +1.4 1,510,678 + MPMX20_01447 0.50 -1.1 1,510,686 - MPMX20_01447 0.52 -0.3 1,510,740 - MPMX20_01447 0.63 -0.5 1,510,751 - MPMX20_01447 0.66 -0.4 1,510,891 + +0.7 1,510,925 + -1.0 1,510,974 + +0.2 1,510,979 + -1.8 1,510,979 + +0.1 1,510,979 + -0.7 1,510,979 + +0.3 1,510,989 + -0.4 1,510,997 - -0.3 1,511,011 + +1.2 1,511,011 + -0.9 1,511,011 + +0.4 1,511,011 + +0.5 1,511,011 + -0.4 1,511,019 - -1.0 1,511,019 - -1.7 1,511,019 - +1.8 1,511,024 + MPMX20_01448 0.10 +0.8 1,511,043 + MPMX20_01448 0.12 +0.2 1,511,079 + MPMX20_01448 0.15 -0.7 1,511,079 + MPMX20_01448 0.15 -1.1 1,511,087 - MPMX20_01448 0.16 +0.3 1,511,158 + MPMX20_01448 0.22 -0.0 1,511,165 - MPMX20_01448 0.23 -1.3 1,511,165 - MPMX20_01448 0.23 +1.2 1,511,167 + MPMX20_01448 0.23 -0.7 1,511,213 - MPMX20_01448 0.27 -0.1 1,511,213 - MPMX20_01448 0.27 -1.5 1,511,215 + MPMX20_01448 0.27 +0.8 1,511,215 + MPMX20_01448 0.27 +0.6 1,511,215 + MPMX20_01448 0.27 -1.3 1,511,245 + MPMX20_01448 0.30 -0.2
Or see this region's nucleotide sequence