Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00393 and MPMX20_00394 overlap by 4 nucleotides MPMX20_00394 and MPMX20_00395 overlap by 56 nucleotides MPMX20_00395 and MPMX20_00396 are separated by 17 nucleotides
MPMX20_00393: MPMX20_00393 - hypothetical protein, at 408,918 to 409,469
_00393
MPMX20_00394: MPMX20_00394 - hypothetical protein, at 409,466 to 410,035
_00394
MPMX20_00395: MPMX20_00395 - hypothetical protein, at 409,980 to 410,216
_00395
MPMX20_00396: MPMX20_00396 - putative cyclic di-GMP phosphodiesterase PdeG, at 410,234 to 411,202
_00396
Position (kb)
409
410
411 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 409.032 kb on + strand, within MPMX20_00393 at 409.063 kb on - strand, within MPMX20_00393 at 409.063 kb on - strand, within MPMX20_00393 at 409.064 kb on - strand, within MPMX20_00393 at 409.074 kb on + strand, within MPMX20_00393 at 409.082 kb on - strand, within MPMX20_00393 at 409.138 kb on - strand, within MPMX20_00393 at 409.169 kb on + strand, within MPMX20_00393 at 409.265 kb on - strand, within MPMX20_00393 at 409.274 kb on + strand, within MPMX20_00393 at 409.276 kb on + strand, within MPMX20_00393 at 409.329 kb on + strand, within MPMX20_00393 at 409.409 kb on - strand, within MPMX20_00393 at 409.485 kb on + strand at 409.488 kb on - strand at 409.493 kb on - strand at 409.498 kb on - strand at 409.564 kb on + strand, within MPMX20_00394 at 409.564 kb on + strand, within MPMX20_00394 at 409.564 kb on + strand, within MPMX20_00394 at 409.576 kb on + strand, within MPMX20_00394 at 409.611 kb on + strand, within MPMX20_00394 at 409.617 kb on - strand, within MPMX20_00394 at 409.642 kb on - strand, within MPMX20_00394 at 409.652 kb on - strand, within MPMX20_00394 at 409.691 kb on + strand, within MPMX20_00394 at 409.809 kb on + strand, within MPMX20_00394 at 409.809 kb on - strand, within MPMX20_00394 at 409.817 kb on - strand, within MPMX20_00394 at 409.829 kb on - strand, within MPMX20_00394 at 409.831 kb on + strand, within MPMX20_00394 at 409.844 kb on + strand, within MPMX20_00394 at 409.885 kb on + strand, within MPMX20_00394 at 409.885 kb on + strand, within MPMX20_00394 at 409.919 kb on - strand, within MPMX20_00394 at 410.018 kb on + strand at 410.026 kb on - strand at 410.076 kb on + strand, within MPMX20_00395 at 410.099 kb on + strand, within MPMX20_00395 at 410.099 kb on + strand, within MPMX20_00395 at 410.114 kb on + strand, within MPMX20_00395 at 410.116 kb on + strand, within MPMX20_00395 at 410.151 kb on + strand, within MPMX20_00395 at 410.193 kb on + strand at 410.201 kb on - strand at 410.313 kb on - strand at 410.321 kb on - strand at 410.330 kb on - strand at 410.350 kb on + strand, within MPMX20_00396 at 410.371 kb on + strand, within MPMX20_00396 at 410.406 kb on + strand, within MPMX20_00396 at 410.409 kb on - strand, within MPMX20_00396 at 410.414 kb on - strand, within MPMX20_00396 at 410.418 kb on - strand, within MPMX20_00396 at 410.428 kb on + strand, within MPMX20_00396 at 410.428 kb on + strand, within MPMX20_00396 at 410.513 kb on + strand, within MPMX20_00396 at 410.521 kb on - strand, within MPMX20_00396 at 410.534 kb on + strand, within MPMX20_00396 at 410.537 kb on - strand, within MPMX20_00396 at 410.591 kb on - strand, within MPMX20_00396 at 410.610 kb on + strand, within MPMX20_00396 at 410.668 kb on + strand, within MPMX20_00396 at 410.668 kb on + strand, within MPMX20_00396 at 410.674 kb on + strand, within MPMX20_00396 at 410.674 kb on + strand, within MPMX20_00396 at 410.710 kb on + strand, within MPMX20_00396 at 410.711 kb on - strand, within MPMX20_00396 at 410.786 kb on + strand, within MPMX20_00396 at 410.794 kb on - strand, within MPMX20_00396 at 410.796 kb on + strand, within MPMX20_00396 at 410.869 kb on + strand, within MPMX20_00396 at 410.936 kb on - strand, within MPMX20_00396 at 411.036 kb on - strand, within MPMX20_00396 at 411.040 kb on - strand, within MPMX20_00396 at 411.042 kb on + strand, within MPMX20_00396 at 411.105 kb on + strand, within MPMX20_00396 at 411.105 kb on + strand, within MPMX20_00396 at 411.203 kb on + strand at 411.211 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 409,032 + MPMX20_00393 0.21 +1.8 409,063 - MPMX20_00393 0.26 -0.3 409,063 - MPMX20_00393 0.26 -0.8 409,064 - MPMX20_00393 0.26 -1.1 409,074 + MPMX20_00393 0.28 -1.6 409,082 - MPMX20_00393 0.30 -0.8 409,138 - MPMX20_00393 0.40 +0.4 409,169 + MPMX20_00393 0.45 -0.9 409,265 - MPMX20_00393 0.63 +0.9 409,274 + MPMX20_00393 0.64 -0.9 409,276 + MPMX20_00393 0.65 -1.0 409,329 + MPMX20_00393 0.74 +0.2 409,409 - MPMX20_00393 0.89 +0.7 409,485 + -1.8 409,488 - +2.8 409,493 - +0.2 409,498 - -0.0 409,564 + MPMX20_00394 0.17 +0.8 409,564 + MPMX20_00394 0.17 -1.2 409,564 + MPMX20_00394 0.17 -0.6 409,576 + MPMX20_00394 0.19 +0.2 409,611 + MPMX20_00394 0.25 -1.3 409,617 - MPMX20_00394 0.26 -0.2 409,642 - MPMX20_00394 0.31 +0.5 409,652 - MPMX20_00394 0.33 -1.2 409,691 + MPMX20_00394 0.39 +1.2 409,809 + MPMX20_00394 0.60 +1.6 409,809 - MPMX20_00394 0.60 -0.4 409,817 - MPMX20_00394 0.62 +2.0 409,829 - MPMX20_00394 0.64 -1.5 409,831 + MPMX20_00394 0.64 -0.2 409,844 + MPMX20_00394 0.66 +1.6 409,885 + MPMX20_00394 0.74 -0.8 409,885 + MPMX20_00394 0.74 -0.3 409,919 - MPMX20_00394 0.79 +1.0 410,018 + +1.5 410,026 - -0.3 410,076 + MPMX20_00395 0.41 +0.2 410,099 + MPMX20_00395 0.50 -2.1 410,099 + MPMX20_00395 0.50 +0.5 410,114 + MPMX20_00395 0.57 -0.9 410,116 + MPMX20_00395 0.57 -1.5 410,151 + MPMX20_00395 0.72 +0.1 410,193 + -1.5 410,201 - +1.2 410,313 - +0.5 410,321 - -1.6 410,330 - +0.2 410,350 + MPMX20_00396 0.12 -0.9 410,371 + MPMX20_00396 0.14 -0.8 410,406 + MPMX20_00396 0.18 -0.7 410,409 - MPMX20_00396 0.18 -0.5 410,414 - MPMX20_00396 0.19 -0.7 410,418 - MPMX20_00396 0.19 -0.1 410,428 + MPMX20_00396 0.20 +0.7 410,428 + MPMX20_00396 0.20 -0.9 410,513 + MPMX20_00396 0.29 -0.1 410,521 - MPMX20_00396 0.30 -0.5 410,534 + MPMX20_00396 0.31 -0.1 410,537 - MPMX20_00396 0.31 -1.0 410,591 - MPMX20_00396 0.37 +1.5 410,610 + MPMX20_00396 0.39 -0.5 410,668 + MPMX20_00396 0.45 +1.3 410,668 + MPMX20_00396 0.45 -0.5 410,674 + MPMX20_00396 0.45 -1.5 410,674 + MPMX20_00396 0.45 -0.4 410,710 + MPMX20_00396 0.49 +0.8 410,711 - MPMX20_00396 0.49 +0.8 410,786 + MPMX20_00396 0.57 -0.7 410,794 - MPMX20_00396 0.58 +1.2 410,796 + MPMX20_00396 0.58 +0.7 410,869 + MPMX20_00396 0.66 +0.3 410,936 - MPMX20_00396 0.72 -1.8 411,036 - MPMX20_00396 0.83 +0.6 411,040 - MPMX20_00396 0.83 +0.6 411,042 + MPMX20_00396 0.83 +1.2 411,105 + MPMX20_00396 0.90 +2.8 411,105 + MPMX20_00396 0.90 -0.0 411,203 + -0.3 411,211 - -1.5
Or see this region's nucleotide sequence