Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00073

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00071 and MPMX20_00072 are separated by 102 nucleotidesMPMX20_00072 and MPMX20_00073 are separated by 99 nucleotidesMPMX20_00073 and MPMX20_00074 are separated by 117 nucleotidesMPMX20_00074 and MPMX20_00075 are separated by 77 nucleotides MPMX20_00071: MPMX20_00071 - hypothetical protein, at 72,030 to 72,989 _00071 MPMX20_00072: MPMX20_00072 - 5-hydroxyisourate hydrolase, at 73,092 to 73,502 _00072 MPMX20_00073: MPMX20_00073 - HTH-type transcriptional regulator MlrA, at 73,602 to 74,327 _00073 MPMX20_00074: MPMX20_00074 - Outer membrane lipoprotein Blc, at 74,445 to 74,969 _00074 MPMX20_00075: MPMX20_00075 - hypothetical protein, at 75,047 to 76,093 _00075 Position (kb) 73 74 75Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 72.604 kb on - strand, within MPMX20_00071at 72.608 kb on + strand, within MPMX20_00071at 72.785 kb on + strand, within MPMX20_00071at 72.814 kb on - strand, within MPMX20_00071at 72.826 kb on - strand, within MPMX20_00071at 72.840 kb on + strand, within MPMX20_00071at 72.840 kb on + strand, within MPMX20_00071at 72.851 kb on + strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.880 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.888 kb on - strand, within MPMX20_00071at 72.894 kb on + strandat 72.902 kb on - strandat 72.984 kb on - strandat 73.169 kb on + strand, within MPMX20_00072at 73.177 kb on - strand, within MPMX20_00072at 73.200 kb on + strand, within MPMX20_00072at 73.229 kb on - strand, within MPMX20_00072at 73.231 kb on - strand, within MPMX20_00072at 73.247 kb on + strand, within MPMX20_00072at 73.256 kb on + strand, within MPMX20_00072at 73.256 kb on + strand, within MPMX20_00072at 73.259 kb on - strand, within MPMX20_00072at 73.277 kb on - strand, within MPMX20_00072at 73.323 kb on - strand, within MPMX20_00072at 73.376 kb on + strand, within MPMX20_00072at 73.378 kb on - strand, within MPMX20_00072at 73.411 kb on - strand, within MPMX20_00072at 73.430 kb on + strand, within MPMX20_00072at 73.454 kb on + strand, within MPMX20_00072at 73.454 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.462 kb on - strandat 73.463 kb on - strandat 73.481 kb on + strandat 73.512 kb on - strandat 73.519 kb on - strandat 73.530 kb on + strandat 73.616 kb on + strandat 73.624 kb on - strandat 73.624 kb on - strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.704 kb on - strand, within MPMX20_00073at 73.779 kb on + strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.821 kb on - strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.887 kb on + strand, within MPMX20_00073at 73.927 kb on - strand, within MPMX20_00073at 73.930 kb on + strand, within MPMX20_00073at 73.975 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.993 kb on - strand, within MPMX20_00073at 73.996 kb on + strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 74.089 kb on - strand, within MPMX20_00073at 74.108 kb on + strand, within MPMX20_00073at 74.128 kb on + strand, within MPMX20_00073at 74.184 kb on + strand, within MPMX20_00073at 74.203 kb on + strand, within MPMX20_00073at 74.208 kb on - strand, within MPMX20_00073at 74.247 kb on + strand, within MPMX20_00073at 74.261 kb on + strandat 74.264 kb on - strandat 74.264 kb on - strandat 74.322 kb on + strandat 74.323 kb on + strandat 74.331 kb on - strandat 74.334 kb on + strandat 74.342 kb on - strandat 74.392 kb on + strandat 74.392 kb on + strandat 74.400 kb on - strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.460 kb on + strandat 74.460 kb on + strandat 74.468 kb on - strandat 74.468 kb on - strandat 74.482 kb on + strandat 74.515 kb on - strand, within MPMX20_00074at 74.524 kb on + strand, within MPMX20_00074at 74.525 kb on + strand, within MPMX20_00074at 74.619 kb on - strand, within MPMX20_00074at 74.685 kb on - strand, within MPMX20_00074at 74.785 kb on - strand, within MPMX20_00074at 74.788 kb on + strand, within MPMX20_00074at 74.796 kb on - strand, within MPMX20_00074at 74.826 kb on + strand, within MPMX20_00074at 74.893 kb on + strand, within MPMX20_00074at 74.898 kb on + strand, within MPMX20_00074at 74.917 kb on - strandat 74.917 kb on - strandat 74.946 kb on - strandat 74.951 kb on + strandat 74.951 kb on + strandat 74.951 kb on - strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.959 kb on - strandat 74.964 kb on - strandat 74.991 kb on + strandat 75.008 kb on + strandat 75.147 kb on - strandat 75.171 kb on + strand, within MPMX20_00075at 75.201 kb on + strand, within MPMX20_00075at 75.224 kb on + strand, within MPMX20_00075at 75.243 kb on - strand, within MPMX20_00075at 75.243 kb on - strand, within MPMX20_00075at 75.316 kb on + strand, within MPMX20_00075

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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72,604 - MPMX20_00071 0.60 -2.1
72,608 + MPMX20_00071 0.60 +0.1
72,785 + MPMX20_00071 0.79 -0.3
72,814 - MPMX20_00071 0.82 -0.5
72,826 - MPMX20_00071 0.83 +1.8
72,840 + MPMX20_00071 0.84 +0.6
72,840 + MPMX20_00071 0.84 +1.0
72,851 + MPMX20_00071 0.86 -1.2
72,859 - MPMX20_00071 0.86 +0.9
72,859 - MPMX20_00071 0.86 -1.0
72,859 - MPMX20_00071 0.86 +0.4
72,859 - MPMX20_00071 0.86 -0.6
72,859 - MPMX20_00071 0.86 +1.2
72,880 + MPMX20_00071 0.89 +0.6
72,884 + MPMX20_00071 0.89 -2.3
72,884 + MPMX20_00071 0.89 +1.5
72,884 + MPMX20_00071 0.89 -0.6
72,888 - MPMX20_00071 0.89 -2.2
72,894 + -1.8
72,902 - -0.5
72,984 - -0.9
73,169 + MPMX20_00072 0.19 +0.6
73,177 - MPMX20_00072 0.21 -0.0
73,200 + MPMX20_00072 0.26 +0.5
73,229 - MPMX20_00072 0.33 +0.8
73,231 - MPMX20_00072 0.34 -0.2
73,247 + MPMX20_00072 0.38 -0.3
73,256 + MPMX20_00072 0.40 -0.6
73,256 + MPMX20_00072 0.40 -0.2
73,259 - MPMX20_00072 0.41 +0.4
73,277 - MPMX20_00072 0.45 +0.3
73,323 - MPMX20_00072 0.56 +2.8
73,376 + MPMX20_00072 0.69 -1.4
73,378 - MPMX20_00072 0.70 -1.9
73,411 - MPMX20_00072 0.78 -0.8
73,430 + MPMX20_00072 0.82 -0.9
73,454 + MPMX20_00072 0.88 -1.2
73,454 + MPMX20_00072 0.88 +1.8
73,455 + MPMX20_00072 0.88 -1.1
73,455 + MPMX20_00072 0.88 +2.0
73,462 - -0.4
73,463 - +1.8
73,481 + -1.0
73,512 - -0.7
73,519 - -0.7
73,530 + +2.2
73,616 + -0.1
73,624 - +1.8
73,624 - +0.8
73,673 + +0.2
73,673 + -1.7
73,673 + +2.8
73,681 - MPMX20_00073 0.11 +0.8
73,681 - MPMX20_00073 0.11 +0.2
73,681 - MPMX20_00073 0.11 -2.7
73,681 - MPMX20_00073 0.11 -0.5
73,704 - MPMX20_00073 0.14 +0.2
73,779 + MPMX20_00073 0.24 -0.9
73,787 - MPMX20_00073 0.25 +0.5
73,787 - MPMX20_00073 0.25 -0.8
73,787 - MPMX20_00073 0.25 +2.8
73,821 - MPMX20_00073 0.30 -0.7
73,865 + MPMX20_00073 0.36 -2.5
73,865 + MPMX20_00073 0.36 -1.3
73,887 + MPMX20_00073 0.39 -0.7
73,927 - MPMX20_00073 0.45 +0.3
73,930 + MPMX20_00073 0.45 -0.0
73,975 + MPMX20_00073 0.51 +0.5
73,985 + MPMX20_00073 0.53 -1.3
73,985 + MPMX20_00073 0.53 -0.1
73,990 + MPMX20_00073 0.53 -1.9
73,990 + MPMX20_00073 0.53 -1.0
73,990 + MPMX20_00073 0.53 +0.5
73,990 + MPMX20_00073 0.53 -0.8
73,990 + MPMX20_00073 0.53 -2.0
73,993 - MPMX20_00073 0.54 -1.8
73,996 + MPMX20_00073 0.54 +0.3
73,998 - MPMX20_00073 0.55 -0.7
73,998 - MPMX20_00073 0.55 -0.2
73,998 - MPMX20_00073 0.55 -1.0
73,998 - MPMX20_00073 0.55 -1.3
74,089 - MPMX20_00073 0.67 -2.1
74,108 + MPMX20_00073 0.70 -2.3
74,128 + MPMX20_00073 0.72 -0.9
74,184 + MPMX20_00073 0.80 -0.9
74,203 + MPMX20_00073 0.83 -0.4
74,208 - MPMX20_00073 0.83 -0.7
74,247 + MPMX20_00073 0.89 -0.8
74,261 + -1.0
74,264 - +0.8
74,264 - -0.8
74,322 + -1.4
74,323 + +1.2
74,331 - -2.2
74,334 + -2.2
74,342 - -0.4
74,392 + +0.1
74,392 + +1.8
74,400 - +2.8
74,402 + -1.4
74,402 + -0.6
74,402 + +0.6
74,402 + +0.7
74,402 + -1.0
74,460 + -1.0
74,460 + -0.8
74,468 - +1.9
74,468 - +0.6
74,482 + +0.4
74,515 - MPMX20_00074 0.13 -0.2
74,524 + MPMX20_00074 0.15 -0.6
74,525 + MPMX20_00074 0.15 -1.6
74,619 - MPMX20_00074 0.33 -0.0
74,685 - MPMX20_00074 0.46 -1.8
74,785 - MPMX20_00074 0.65 +2.8
74,788 + MPMX20_00074 0.65 -0.2
74,796 - MPMX20_00074 0.67 +0.9
74,826 + MPMX20_00074 0.73 +3.5
74,893 + MPMX20_00074 0.85 +0.9
74,898 + MPMX20_00074 0.86 +0.6
74,917 - -1.1
74,917 - -3.0
74,946 - +0.2
74,951 + -0.0
74,951 + +1.5
74,951 - -1.4
74,956 + -1.6
74,956 + -2.4
74,956 + +1.5
74,956 + +0.8
74,956 + -0.5
74,959 - +2.8
74,964 - -0.7
74,991 + -0.4
75,008 + +1.2
75,147 - -0.9
75,171 + MPMX20_00075 0.12 +1.8
75,201 + MPMX20_00075 0.15 -0.3
75,224 + MPMX20_00075 0.17 -0.4
75,243 - MPMX20_00075 0.19 -0.8
75,243 - MPMX20_00075 0.19 +0.2
75,316 + MPMX20_00075 0.26 -0.3

Or see this region's nucleotide sequence