Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02161

Experiment: M9 plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02160 and MPMX20_02161 overlap by 4 nucleotidesMPMX20_02161 and MPMX20_02162 are separated by 74 nucleotidesMPMX20_02162 and MPMX20_02163 are separated by 273 nucleotides MPMX20_02160: MPMX20_02160 - Nickel and cobalt resistance protein CnrA, at 2,252,060 to 2,255,119 _02160 MPMX20_02161: MPMX20_02161 - Multidrug resistance protein MdtA, at 2,255,116 to 2,256,225 _02161 MPMX20_02162: MPMX20_02162 - hypothetical protein, at 2,256,300 to 2,256,914 _02162 MPMX20_02163: MPMX20_02163 - putative oxidoreductase, at 2,257,188 to 2,258,006 _02163 Position (kb) 2255 2256 2257Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2254.179 kb on + strand, within MPMX20_02160at 2254.200 kb on - strand, within MPMX20_02160at 2254.209 kb on + strand, within MPMX20_02160at 2254.209 kb on + strand, within MPMX20_02160at 2254.219 kb on + strand, within MPMX20_02160at 2254.229 kb on + strand, within MPMX20_02160at 2254.251 kb on + strand, within MPMX20_02160at 2254.254 kb on - strand, within MPMX20_02160at 2254.254 kb on - strand, within MPMX20_02160at 2254.272 kb on - strand, within MPMX20_02160at 2254.287 kb on - strand, within MPMX20_02160at 2254.287 kb on - strand, within MPMX20_02160at 2254.308 kb on + strand, within MPMX20_02160at 2254.350 kb on + strand, within MPMX20_02160at 2254.350 kb on + strand, within MPMX20_02160at 2254.358 kb on - strand, within MPMX20_02160at 2254.358 kb on - strand, within MPMX20_02160at 2254.486 kb on - strand, within MPMX20_02160at 2254.518 kb on - strand, within MPMX20_02160at 2254.681 kb on + strand, within MPMX20_02160at 2254.681 kb on + strand, within MPMX20_02160at 2254.784 kb on - strand, within MPMX20_02160at 2254.856 kb on + strandat 2254.980 kb on + strandat 2255.055 kb on - strandat 2255.096 kb on - strandat 2255.218 kb on + strandat 2255.218 kb on + strandat 2255.268 kb on + strand, within MPMX20_02161at 2255.326 kb on + strand, within MPMX20_02161at 2255.339 kb on + strand, within MPMX20_02161at 2255.358 kb on - strand, within MPMX20_02161at 2255.367 kb on + strand, within MPMX20_02161at 2255.377 kb on - strand, within MPMX20_02161at 2255.394 kb on - strand, within MPMX20_02161at 2255.406 kb on - strand, within MPMX20_02161at 2255.461 kb on - strand, within MPMX20_02161at 2255.570 kb on + strand, within MPMX20_02161at 2255.608 kb on + strand, within MPMX20_02161at 2255.616 kb on - strand, within MPMX20_02161at 2255.621 kb on - strand, within MPMX20_02161at 2255.661 kb on + strand, within MPMX20_02161at 2255.661 kb on + strand, within MPMX20_02161at 2255.669 kb on - strand, within MPMX20_02161at 2255.669 kb on - strand, within MPMX20_02161at 2255.717 kb on + strand, within MPMX20_02161at 2255.749 kb on - strand, within MPMX20_02161at 2255.762 kb on + strand, within MPMX20_02161at 2255.770 kb on - strand, within MPMX20_02161at 2255.795 kb on + strand, within MPMX20_02161at 2255.795 kb on + strand, within MPMX20_02161at 2255.882 kb on - strand, within MPMX20_02161at 2255.887 kb on + strand, within MPMX20_02161at 2255.887 kb on + strand, within MPMX20_02161at 2255.924 kb on - strand, within MPMX20_02161at 2255.963 kb on + strand, within MPMX20_02161at 2255.964 kb on - strand, within MPMX20_02161at 2255.965 kb on - strand, within MPMX20_02161at 2255.981 kb on - strand, within MPMX20_02161at 2256.120 kb on - strandat 2256.151 kb on - strandat 2256.210 kb on + strandat 2256.217 kb on - strandat 2256.220 kb on + strandat 2256.224 kb on + strandat 2256.393 kb on - strand, within MPMX20_02162at 2256.393 kb on - strand, within MPMX20_02162at 2256.422 kb on + strand, within MPMX20_02162at 2256.422 kb on + strand, within MPMX20_02162at 2256.435 kb on - strand, within MPMX20_02162at 2256.753 kb on + strand, within MPMX20_02162at 2256.839 kb on - strand, within MPMX20_02162at 2256.839 kb on - strand, within MPMX20_02162at 2256.878 kb on + strandat 2256.878 kb on + strandat 2256.897 kb on - strandat 2256.992 kb on + strandat 2257.036 kb on + strandat 2257.044 kb on - strandat 2257.044 kb on - strandat 2257.044 kb on - strandat 2257.112 kb on - strandat 2257.170 kb on + strandat 2257.170 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,254,179 + MPMX20_02160 0.69 -0.9
2,254,200 - MPMX20_02160 0.70 +1.8
2,254,209 + MPMX20_02160 0.70 +0.8
2,254,209 + MPMX20_02160 0.70 -0.2
2,254,219 + MPMX20_02160 0.71 +1.0
2,254,229 + MPMX20_02160 0.71 -1.2
2,254,251 + MPMX20_02160 0.72 -0.3
2,254,254 - MPMX20_02160 0.72 +2.4
2,254,254 - MPMX20_02160 0.72 -1.6
2,254,272 - MPMX20_02160 0.72 +0.3
2,254,287 - MPMX20_02160 0.73 -2.3
2,254,287 - MPMX20_02160 0.73 +0.1
2,254,308 + MPMX20_02160 0.73 +0.5
2,254,350 + MPMX20_02160 0.75 -1.8
2,254,350 + MPMX20_02160 0.75 -1.5
2,254,358 - MPMX20_02160 0.75 +0.5
2,254,358 - MPMX20_02160 0.75 +2.2
2,254,486 - MPMX20_02160 0.79 +0.1
2,254,518 - MPMX20_02160 0.80 +0.4
2,254,681 + MPMX20_02160 0.86 -0.5
2,254,681 + MPMX20_02160 0.86 +0.2
2,254,784 - MPMX20_02160 0.89 -0.1
2,254,856 + -1.6
2,254,980 + +0.1
2,255,055 - -0.2
2,255,096 - +3.8
2,255,218 + +1.1
2,255,218 + +0.1
2,255,268 + MPMX20_02161 0.14 -0.3
2,255,326 + MPMX20_02161 0.19 +0.0
2,255,339 + MPMX20_02161 0.20 -1.1
2,255,358 - MPMX20_02161 0.22 +0.4
2,255,367 + MPMX20_02161 0.23 +0.7
2,255,377 - MPMX20_02161 0.24 -1.0
2,255,394 - MPMX20_02161 0.25 +0.2
2,255,406 - MPMX20_02161 0.26 -2.1
2,255,461 - MPMX20_02161 0.31 +1.8
2,255,570 + MPMX20_02161 0.41 -0.5
2,255,608 + MPMX20_02161 0.44 +1.4
2,255,616 - MPMX20_02161 0.45 -0.8
2,255,621 - MPMX20_02161 0.45 -0.6
2,255,661 + MPMX20_02161 0.49 -1.2
2,255,661 + MPMX20_02161 0.49 +1.2
2,255,669 - MPMX20_02161 0.50 -0.6
2,255,669 - MPMX20_02161 0.50 +0.6
2,255,717 + MPMX20_02161 0.54 -1.5
2,255,749 - MPMX20_02161 0.57 -0.5
2,255,762 + MPMX20_02161 0.58 +0.2
2,255,770 - MPMX20_02161 0.59 -2.8
2,255,795 + MPMX20_02161 0.61 +0.6
2,255,795 + MPMX20_02161 0.61 -0.7
2,255,882 - MPMX20_02161 0.69 -1.2
2,255,887 + MPMX20_02161 0.69 -1.5
2,255,887 + MPMX20_02161 0.69 -0.2
2,255,924 - MPMX20_02161 0.73 -0.1
2,255,963 + MPMX20_02161 0.76 -0.7
2,255,964 - MPMX20_02161 0.76 -0.8
2,255,965 - MPMX20_02161 0.76 -1.3
2,255,981 - MPMX20_02161 0.78 -0.1
2,256,120 - +0.6
2,256,151 - +0.4
2,256,210 + -0.4
2,256,217 - +0.1
2,256,220 + -0.3
2,256,224 + -0.8
2,256,393 - MPMX20_02162 0.15 +0.3
2,256,393 - MPMX20_02162 0.15 -1.1
2,256,422 + MPMX20_02162 0.20 +1.1
2,256,422 + MPMX20_02162 0.20 -0.3
2,256,435 - MPMX20_02162 0.22 -1.2
2,256,753 + MPMX20_02162 0.74 -0.5
2,256,839 - MPMX20_02162 0.88 -0.1
2,256,839 - MPMX20_02162 0.88 +0.1
2,256,878 + +0.4
2,256,878 + -1.5
2,256,897 - -1.3
2,256,992 + -0.6
2,257,036 + -0.6
2,257,044 - +1.3
2,257,044 - +0.1
2,257,044 - -2.1
2,257,112 - +0.9
2,257,170 + +0.0
2,257,170 + -1.2

Or see this region's nucleotide sequence