Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02619

Experiment: 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02617 and MPMX20_02618 overlap by 8 nucleotidesMPMX20_02618 and MPMX20_02619 are separated by 3 nucleotidesMPMX20_02619 and MPMX20_02620 are separated by 36 nucleotides MPMX20_02617: MPMX20_02617 - Nitrate/nitrite sensor protein NarX, at 2,756,260 to 2,758,056 _02617 MPMX20_02618: MPMX20_02618 - Nitrate/nitrite response regulator protein NarL, at 2,758,049 to 2,758,699 _02618 MPMX20_02619: MPMX20_02619 - Invasin, at 2,758,703 to 2,760,148 _02619 MPMX20_02620: MPMX20_02620 - Nitrate reductase, at 2,760,185 to 2,762,683 _02620 Position (kb) 2758 2759 2760 2761Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2757.733 kb on - strand, within MPMX20_02617at 2757.738 kb on - strand, within MPMX20_02617at 2757.742 kb on - strand, within MPMX20_02617at 2757.745 kb on - strand, within MPMX20_02617at 2757.775 kb on + strand, within MPMX20_02617at 2757.775 kb on + strand, within MPMX20_02617at 2757.775 kb on + strand, within MPMX20_02617at 2757.775 kb on + strand, within MPMX20_02617at 2757.783 kb on - strand, within MPMX20_02617at 2757.867 kb on - strand, within MPMX20_02617at 2757.938 kb on + strandat 2758.031 kb on - strandat 2758.031 kb on - strandat 2758.031 kb on - strandat 2758.036 kb on - strandat 2758.045 kb on + strandat 2758.177 kb on - strand, within MPMX20_02618at 2758.256 kb on - strand, within MPMX20_02618at 2758.396 kb on + strand, within MPMX20_02618at 2758.404 kb on - strand, within MPMX20_02618at 2758.404 kb on - strand, within MPMX20_02618at 2758.404 kb on - strand, within MPMX20_02618at 2758.404 kb on - strand, within MPMX20_02618at 2758.404 kb on - strand, within MPMX20_02618at 2758.479 kb on - strand, within MPMX20_02618at 2758.520 kb on - strand, within MPMX20_02618at 2758.558 kb on - strand, within MPMX20_02618at 2758.558 kb on - strand, within MPMX20_02618at 2758.584 kb on + strand, within MPMX20_02618at 2758.674 kb on + strandat 2758.674 kb on + strandat 2758.742 kb on + strandat 2758.960 kb on + strand, within MPMX20_02619at 2759.012 kb on - strand, within MPMX20_02619at 2759.049 kb on - strand, within MPMX20_02619at 2759.194 kb on + strand, within MPMX20_02619at 2759.312 kb on - strand, within MPMX20_02619at 2759.325 kb on + strand, within MPMX20_02619at 2759.333 kb on - strand, within MPMX20_02619at 2759.333 kb on - strand, within MPMX20_02619at 2759.333 kb on - strand, within MPMX20_02619at 2759.335 kb on + strand, within MPMX20_02619at 2759.335 kb on + strand, within MPMX20_02619at 2759.343 kb on - strand, within MPMX20_02619at 2759.415 kb on - strand, within MPMX20_02619at 2759.434 kb on - strand, within MPMX20_02619at 2759.443 kb on + strand, within MPMX20_02619at 2759.610 kb on + strand, within MPMX20_02619at 2759.618 kb on - strand, within MPMX20_02619at 2759.618 kb on - strand, within MPMX20_02619at 2759.636 kb on + strand, within MPMX20_02619at 2759.667 kb on - strand, within MPMX20_02619at 2759.694 kb on - strand, within MPMX20_02619at 2759.710 kb on + strand, within MPMX20_02619at 2759.710 kb on + strand, within MPMX20_02619at 2759.718 kb on - strand, within MPMX20_02619at 2759.718 kb on - strand, within MPMX20_02619at 2759.773 kb on - strand, within MPMX20_02619at 2759.894 kb on + strand, within MPMX20_02619at 2759.991 kb on - strand, within MPMX20_02619at 2760.051 kb on + strandat 2760.059 kb on - strandat 2760.105 kb on + strandat 2760.105 kb on + strandat 2760.146 kb on - strandat 2760.252 kb on + strandat 2760.258 kb on - strandat 2760.265 kb on + strandat 2760.268 kb on - strandat 2760.273 kb on - strandat 2760.273 kb on - strandat 2760.342 kb on - strandat 2760.366 kb on - strandat 2760.372 kb on - strandat 2760.456 kb on - strand, within MPMX20_02620at 2760.480 kb on + strand, within MPMX20_02620at 2760.516 kb on + strand, within MPMX20_02620at 2760.524 kb on - strand, within MPMX20_02620at 2760.546 kb on - strand, within MPMX20_02620at 2760.589 kb on + strand, within MPMX20_02620at 2760.597 kb on - strand, within MPMX20_02620at 2760.597 kb on - strand, within MPMX20_02620at 2760.687 kb on - strand, within MPMX20_02620at 2760.692 kb on + strand, within MPMX20_02620at 2760.837 kb on + strand, within MPMX20_02620at 2760.845 kb on - strand, within MPMX20_02620at 2760.852 kb on + strand, within MPMX20_02620at 2760.853 kb on - strand, within MPMX20_02620at 2760.860 kb on - strand, within MPMX20_02620at 2760.878 kb on - strand, within MPMX20_02620at 2760.914 kb on - strand, within MPMX20_02620at 2760.925 kb on - strand, within MPMX20_02620at 2760.937 kb on - strand, within MPMX20_02620at 2760.979 kb on + strand, within MPMX20_02620at 2760.979 kb on + strand, within MPMX20_02620at 2760.979 kb on + strand, within MPMX20_02620at 2760.979 kb on + strand, within MPMX20_02620at 2760.979 kb on + strand, within MPMX20_02620at 2760.980 kb on - strand, within MPMX20_02620at 2760.984 kb on + strand, within MPMX20_02620at 2760.984 kb on + strand, within MPMX20_02620at 2760.984 kb on + strand, within MPMX20_02620at 2760.984 kb on + strand, within MPMX20_02620at 2760.987 kb on - strand, within MPMX20_02620at 2760.992 kb on - strand, within MPMX20_02620at 2760.992 kb on - strand, within MPMX20_02620at 2760.992 kb on - strand, within MPMX20_02620at 2760.992 kb on - strand, within MPMX20_02620at 2761.007 kb on + strand, within MPMX20_02620at 2761.115 kb on - strand, within MPMX20_02620at 2761.147 kb on - strand, within MPMX20_02620

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,757,733 - MPMX20_02617 0.82 -0.2
2,757,738 - MPMX20_02617 0.82 +2.2
2,757,742 - MPMX20_02617 0.82 +1.4
2,757,745 - MPMX20_02617 0.83 +0.5
2,757,775 + MPMX20_02617 0.84 +1.1
2,757,775 + MPMX20_02617 0.84 +0.4
2,757,775 + MPMX20_02617 0.84 +0.6
2,757,775 + MPMX20_02617 0.84 -2.2
2,757,783 - MPMX20_02617 0.85 +0.2
2,757,867 - MPMX20_02617 0.89 -0.3
2,757,938 + -1.6
2,758,031 - +0.2
2,758,031 - -0.7
2,758,031 - -2.6
2,758,036 - -1.5
2,758,045 + -1.1
2,758,177 - MPMX20_02618 0.20 +4.6
2,758,256 - MPMX20_02618 0.32 +0.2
2,758,396 + MPMX20_02618 0.53 -0.2
2,758,404 - MPMX20_02618 0.55 +1.8
2,758,404 - MPMX20_02618 0.55 +1.3
2,758,404 - MPMX20_02618 0.55 -1.3
2,758,404 - MPMX20_02618 0.55 +0.5
2,758,404 - MPMX20_02618 0.55 +0.3
2,758,479 - MPMX20_02618 0.66 -1.0
2,758,520 - MPMX20_02618 0.72 -0.8
2,758,558 - MPMX20_02618 0.78 -1.2
2,758,558 - MPMX20_02618 0.78 +1.0
2,758,584 + MPMX20_02618 0.82 +1.1
2,758,674 + -1.4
2,758,674 + +1.9
2,758,742 + +1.8
2,758,960 + MPMX20_02619 0.18 -0.6
2,759,012 - MPMX20_02619 0.21 -4.0
2,759,049 - MPMX20_02619 0.24 +3.3
2,759,194 + MPMX20_02619 0.34 -0.7
2,759,312 - MPMX20_02619 0.42 -0.7
2,759,325 + MPMX20_02619 0.43 +2.0
2,759,333 - MPMX20_02619 0.44 -1.6
2,759,333 - MPMX20_02619 0.44 +0.7
2,759,333 - MPMX20_02619 0.44 -0.3
2,759,335 + MPMX20_02619 0.44 -2.9
2,759,335 + MPMX20_02619 0.44 -0.0
2,759,343 - MPMX20_02619 0.44 -0.7
2,759,415 - MPMX20_02619 0.49 -1.2
2,759,434 - MPMX20_02619 0.51 -2.4
2,759,443 + MPMX20_02619 0.51 -0.5
2,759,610 + MPMX20_02619 0.63 -1.0
2,759,618 - MPMX20_02619 0.63 +0.6
2,759,618 - MPMX20_02619 0.63 -0.0
2,759,636 + MPMX20_02619 0.65 -0.7
2,759,667 - MPMX20_02619 0.67 -2.7
2,759,694 - MPMX20_02619 0.69 -1.6
2,759,710 + MPMX20_02619 0.70 -0.5
2,759,710 + MPMX20_02619 0.70 -1.9
2,759,718 - MPMX20_02619 0.70 -0.9
2,759,718 - MPMX20_02619 0.70 -0.4
2,759,773 - MPMX20_02619 0.74 -0.7
2,759,894 + MPMX20_02619 0.82 +1.7
2,759,991 - MPMX20_02619 0.89 -0.2
2,760,051 + -1.4
2,760,059 - -0.6
2,760,105 + -3.5
2,760,105 + -0.3
2,760,146 - -1.5
2,760,252 + -1.2
2,760,258 - +1.0
2,760,265 + -1.5
2,760,268 - +0.1
2,760,273 - -0.2
2,760,273 - -0.7
2,760,342 - -0.8
2,760,366 - +0.5
2,760,372 - +2.0
2,760,456 - MPMX20_02620 0.11 -0.2
2,760,480 + MPMX20_02620 0.12 -1.5
2,760,516 + MPMX20_02620 0.13 -0.4
2,760,524 - MPMX20_02620 0.14 +3.1
2,760,546 - MPMX20_02620 0.14 +0.7
2,760,589 + MPMX20_02620 0.16 +0.8
2,760,597 - MPMX20_02620 0.16 -1.9
2,760,597 - MPMX20_02620 0.16 +2.3
2,760,687 - MPMX20_02620 0.20 -2.0
2,760,692 + MPMX20_02620 0.20 +1.3
2,760,837 + MPMX20_02620 0.26 +0.5
2,760,845 - MPMX20_02620 0.26 -0.5
2,760,852 + MPMX20_02620 0.27 -1.5
2,760,853 - MPMX20_02620 0.27 -1.7
2,760,860 - MPMX20_02620 0.27 -3.2
2,760,878 - MPMX20_02620 0.28 +0.3
2,760,914 - MPMX20_02620 0.29 +0.2
2,760,925 - MPMX20_02620 0.30 -1.7
2,760,937 - MPMX20_02620 0.30 +0.8
2,760,979 + MPMX20_02620 0.32 -0.0
2,760,979 + MPMX20_02620 0.32 -0.3
2,760,979 + MPMX20_02620 0.32 -1.7
2,760,979 + MPMX20_02620 0.32 +1.9
2,760,979 + MPMX20_02620 0.32 +0.2
2,760,980 - MPMX20_02620 0.32 -0.3
2,760,984 + MPMX20_02620 0.32 -2.0
2,760,984 + MPMX20_02620 0.32 +1.2
2,760,984 + MPMX20_02620 0.32 +0.4
2,760,984 + MPMX20_02620 0.32 -0.0
2,760,987 - MPMX20_02620 0.32 -2.7
2,760,992 - MPMX20_02620 0.32 -0.6
2,760,992 - MPMX20_02620 0.32 -0.9
2,760,992 - MPMX20_02620 0.32 +0.4
2,760,992 - MPMX20_02620 0.32 -2.4
2,761,007 + MPMX20_02620 0.33 -1.1
2,761,115 - MPMX20_02620 0.37 +1.4
2,761,147 - MPMX20_02620 0.38 -1.0

Or see this region's nucleotide sequence