Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02132

Experiment: 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02131 and MPMX20_02132 are separated by 38 nucleotidesMPMX20_02132 and MPMX20_02133 are separated by 210 nucleotides MPMX20_02131: MPMX20_02131 - putative MFS-type transporter, at 2,219,516 to 2,220,712 _02131 MPMX20_02132: MPMX20_02132 - D-lactate dehydrogenase, at 2,220,751 to 2,221,740 _02132 MPMX20_02133: MPMX20_02133 - hypothetical protein, at 2,221,951 to 2,224,590 _02133 Position (kb) 2220 2221 2222Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2219.751 kb on + strand, within MPMX20_02131at 2219.751 kb on + strand, within MPMX20_02131at 2219.751 kb on + strand, within MPMX20_02131at 2219.761 kb on + strand, within MPMX20_02131at 2219.781 kb on - strand, within MPMX20_02131at 2219.872 kb on - strand, within MPMX20_02131at 2219.985 kb on - strand, within MPMX20_02131at 2220.020 kb on - strand, within MPMX20_02131at 2220.099 kb on - strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.159 kb on - strand, within MPMX20_02131at 2220.159 kb on - strand, within MPMX20_02131at 2220.195 kb on - strand, within MPMX20_02131at 2220.335 kb on - strand, within MPMX20_02131at 2220.467 kb on - strand, within MPMX20_02131at 2220.474 kb on - strand, within MPMX20_02131at 2220.520 kb on + strand, within MPMX20_02131at 2220.528 kb on - strand, within MPMX20_02131at 2220.535 kb on - strand, within MPMX20_02131at 2220.540 kb on + strand, within MPMX20_02131at 2220.630 kb on - strandat 2220.632 kb on - strandat 2220.642 kb on + strandat 2220.650 kb on - strandat 2220.688 kb on - strandat 2220.705 kb on + strandat 2220.724 kb on + strandat 2220.724 kb on + strandat 2220.724 kb on + strandat 2220.732 kb on - strandat 2220.732 kb on - strandat 2220.732 kb on - strandat 2220.732 kb on - strandat 2220.732 kb on - strandat 2220.737 kb on - strandat 2220.756 kb on - strandat 2220.769 kb on - strandat 2220.780 kb on - strandat 2220.826 kb on + strandat 2220.850 kb on + strand, within MPMX20_02132at 2220.974 kb on - strand, within MPMX20_02132at 2221.077 kb on + strand, within MPMX20_02132at 2221.213 kb on - strand, within MPMX20_02132at 2221.277 kb on + strand, within MPMX20_02132at 2221.279 kb on - strand, within MPMX20_02132at 2221.312 kb on - strand, within MPMX20_02132at 2221.325 kb on - strand, within MPMX20_02132at 2221.325 kb on - strand, within MPMX20_02132at 2221.469 kb on - strand, within MPMX20_02132at 2221.476 kb on - strand, within MPMX20_02132at 2221.501 kb on + strand, within MPMX20_02132at 2221.501 kb on + strand, within MPMX20_02132at 2221.501 kb on + strand, within MPMX20_02132at 2221.509 kb on - strand, within MPMX20_02132at 2221.509 kb on - strand, within MPMX20_02132at 2221.514 kb on - strand, within MPMX20_02132at 2221.524 kb on - strand, within MPMX20_02132at 2221.524 kb on - strand, within MPMX20_02132at 2221.649 kb on - strandat 2221.662 kb on + strandat 2221.670 kb on - strandat 2221.720 kb on + strandat 2221.720 kb on + strandat 2221.721 kb on - strandat 2221.726 kb on - strandat 2221.726 kb on - strandat 2221.726 kb on - strandat 2221.728 kb on - strandat 2221.728 kb on - strandat 2221.876 kb on - strandat 2221.876 kb on - strandat 2221.876 kb on - strandat 2222.016 kb on + strandat 2222.024 kb on + strandat 2222.024 kb on - strandat 2222.024 kb on - strandat 2222.024 kb on - strandat 2222.024 kb on - strandat 2222.024 kb on - strandat 2222.037 kb on - strandat 2222.038 kb on + strandat 2222.046 kb on - strandat 2222.047 kb on - strandat 2222.084 kb on + strandat 2222.121 kb on + strandat 2222.261 kb on + strand, within MPMX20_02133at 2222.271 kb on + strand, within MPMX20_02133at 2222.271 kb on + strand, within MPMX20_02133at 2222.279 kb on - strand, within MPMX20_02133at 2222.279 kb on - strand, within MPMX20_02133at 2222.279 kb on - strand, within MPMX20_02133at 2222.309 kb on - strand, within MPMX20_02133at 2222.356 kb on - strand, within MPMX20_02133at 2222.459 kb on + strand, within MPMX20_02133at 2222.463 kb on + strand, within MPMX20_02133at 2222.463 kb on + strand, within MPMX20_02133at 2222.471 kb on + strand, within MPMX20_02133at 2222.471 kb on + strand, within MPMX20_02133at 2222.486 kb on + strand, within MPMX20_02133at 2222.574 kb on - strand, within MPMX20_02133at 2222.616 kb on + strand, within MPMX20_02133at 2222.656 kb on + strand, within MPMX20_02133at 2222.673 kb on + strand, within MPMX20_02133at 2222.673 kb on + strand, within MPMX20_02133at 2222.681 kb on - strand, within MPMX20_02133at 2222.686 kb on - strand, within MPMX20_02133

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
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2,219,751 + MPMX20_02131 0.20 +1.0
2,219,751 + MPMX20_02131 0.20 -1.1
2,219,751 + MPMX20_02131 0.20 -0.9
2,219,761 + MPMX20_02131 0.20 +1.6
2,219,781 - MPMX20_02131 0.22 -1.5
2,219,872 - MPMX20_02131 0.30 +0.4
2,219,985 - MPMX20_02131 0.39 -0.2
2,220,020 - MPMX20_02131 0.42 -0.5
2,220,099 - MPMX20_02131 0.49 -1.7
2,220,151 + MPMX20_02131 0.53 -1.2
2,220,151 + MPMX20_02131 0.53 -0.8
2,220,151 + MPMX20_02131 0.53 -2.7
2,220,159 - MPMX20_02131 0.54 +3.3
2,220,159 - MPMX20_02131 0.54 +0.7
2,220,195 - MPMX20_02131 0.57 +1.0
2,220,335 - MPMX20_02131 0.68 -1.0
2,220,467 - MPMX20_02131 0.79 +3.2
2,220,474 - MPMX20_02131 0.80 +0.4
2,220,520 + MPMX20_02131 0.84 -2.6
2,220,528 - MPMX20_02131 0.85 +0.0
2,220,535 - MPMX20_02131 0.85 -0.1
2,220,540 + MPMX20_02131 0.86 +1.3
2,220,630 - -0.2
2,220,632 - -1.9
2,220,642 + -2.0
2,220,650 - +6.4
2,220,688 - -0.8
2,220,705 + -0.4
2,220,724 + -0.5
2,220,724 + -0.7
2,220,724 + -1.1
2,220,732 - -2.8
2,220,732 - +0.6
2,220,732 - +1.2
2,220,732 - -0.0
2,220,732 - -0.6
2,220,737 - -1.3
2,220,756 - -2.5
2,220,769 - -1.0
2,220,780 - -0.3
2,220,826 + +0.6
2,220,850 + MPMX20_02132 0.10 -2.6
2,220,974 - MPMX20_02132 0.23 -2.4
2,221,077 + MPMX20_02132 0.33 +0.6
2,221,213 - MPMX20_02132 0.47 -3.0
2,221,277 + MPMX20_02132 0.53 +1.1
2,221,279 - MPMX20_02132 0.53 -2.2
2,221,312 - MPMX20_02132 0.57 -0.6
2,221,325 - MPMX20_02132 0.58 +2.0
2,221,325 - MPMX20_02132 0.58 -1.3
2,221,469 - MPMX20_02132 0.73 +0.5
2,221,476 - MPMX20_02132 0.73 -0.3
2,221,501 + MPMX20_02132 0.76 +0.4
2,221,501 + MPMX20_02132 0.76 -0.3
2,221,501 + MPMX20_02132 0.76 -0.3
2,221,509 - MPMX20_02132 0.77 -1.7
2,221,509 - MPMX20_02132 0.77 +2.2
2,221,514 - MPMX20_02132 0.77 -0.4
2,221,524 - MPMX20_02132 0.78 +0.7
2,221,524 - MPMX20_02132 0.78 +2.3
2,221,649 - -0.8
2,221,662 + -1.5
2,221,670 - -0.7
2,221,720 + -1.5
2,221,720 + -2.6
2,221,721 - -3.6
2,221,726 - -1.6
2,221,726 - +1.3
2,221,726 - -0.2
2,221,728 - +0.0
2,221,728 - -0.8
2,221,876 - +1.6
2,221,876 - +0.9
2,221,876 - -0.2
2,222,016 + +2.8
2,222,024 + +1.4
2,222,024 - +0.1
2,222,024 - -0.4
2,222,024 - -0.5
2,222,024 - -0.0
2,222,024 - -0.5
2,222,037 - -0.9
2,222,038 + +1.5
2,222,046 - -3.2
2,222,047 - -2.9
2,222,084 + -3.3
2,222,121 + -1.3
2,222,261 + MPMX20_02133 0.12 +0.4
2,222,271 + MPMX20_02133 0.12 -0.7
2,222,271 + MPMX20_02133 0.12 -1.5
2,222,279 - MPMX20_02133 0.12 +0.9
2,222,279 - MPMX20_02133 0.12 +2.6
2,222,279 - MPMX20_02133 0.12 +0.6
2,222,309 - MPMX20_02133 0.14 +0.3
2,222,356 - MPMX20_02133 0.15 -1.0
2,222,459 + MPMX20_02133 0.19 -0.1
2,222,463 + MPMX20_02133 0.19 -0.6
2,222,463 + MPMX20_02133 0.19 -0.0
2,222,471 + MPMX20_02133 0.20 +1.0
2,222,471 + MPMX20_02133 0.20 +4.6
2,222,486 + MPMX20_02133 0.20 +1.0
2,222,574 - MPMX20_02133 0.24 -2.4
2,222,616 + MPMX20_02133 0.25 +0.6
2,222,656 + MPMX20_02133 0.27 -2.8
2,222,673 + MPMX20_02133 0.27 +0.3
2,222,673 + MPMX20_02133 0.27 +0.5
2,222,681 - MPMX20_02133 0.28 -1.4
2,222,686 - MPMX20_02133 0.28 -1.5

Or see this region's nucleotide sequence