Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01703

Experiment: 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01702 and MPMX20_01703 are separated by 423 nucleotidesMPMX20_01703 and MPMX20_01704 are separated by 115 nucleotidesMPMX20_01704 and MPMX20_01705 are separated by 32 nucleotides MPMX20_01702: MPMX20_01702 - Bifunctional protein PutA, at 1,797,227 to 1,801,189 _01702 MPMX20_01703: MPMX20_01703 - Sodium/proline symporter, at 1,801,613 to 1,803,121 _01703 MPMX20_01704: MPMX20_01704 - hypothetical protein, at 1,803,237 to 1,803,656 _01704 MPMX20_01705: MPMX20_01705 - Nucleoside permease NupC, at 1,803,689 to 1,804,873 _01705 Position (kb) 1801 1802 1803 1804Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1800.692 kb on + strand, within MPMX20_01702at 1800.692 kb on + strand, within MPMX20_01702at 1800.692 kb on + strand, within MPMX20_01702at 1800.692 kb on + strand, within MPMX20_01702at 1800.692 kb on + strand, within MPMX20_01702at 1800.700 kb on - strand, within MPMX20_01702at 1800.704 kb on + strand, within MPMX20_01702at 1800.705 kb on - strand, within MPMX20_01702at 1800.709 kb on + strand, within MPMX20_01702at 1800.709 kb on + strand, within MPMX20_01702at 1800.709 kb on + strand, within MPMX20_01702at 1800.717 kb on - strand, within MPMX20_01702at 1800.734 kb on + strand, within MPMX20_01702at 1800.751 kb on - strand, within MPMX20_01702at 1800.815 kb on - strandat 1800.856 kb on - strandat 1800.861 kb on - strandat 1801.045 kb on + strandat 1801.062 kb on + strandat 1801.131 kb on + strandat 1801.131 kb on + strandat 1801.131 kb on + strandat 1801.131 kb on + strandat 1801.131 kb on + strandat 1801.139 kb on - strandat 1801.139 kb on - strandat 1801.139 kb on - strandat 1801.152 kb on + strandat 1801.163 kb on - strandat 1801.170 kb on - strandat 1801.170 kb on - strandat 1801.176 kb on - strandat 1801.176 kb on - strandat 1801.178 kb on + strandat 1801.178 kb on + strandat 1801.179 kb on + strandat 1801.186 kb on - strandat 1801.187 kb on - strandat 1801.197 kb on - strandat 1801.425 kb on - strandat 1801.499 kb on + strandat 1801.499 kb on + strandat 1801.499 kb on + strandat 1801.507 kb on - strandat 1801.507 kb on - strandat 1801.517 kb on - strandat 1801.531 kb on + strandat 1801.550 kb on + strandat 1801.583 kb on - strandat 1801.584 kb on + strandat 1801.705 kb on - strandat 1801.729 kb on + strandat 1801.734 kb on + strandat 1801.734 kb on + strandat 1801.734 kb on + strandat 1801.734 kb on + strandat 1801.742 kb on - strandat 1801.742 kb on - strandat 1801.742 kb on - strandat 1801.742 kb on - strandat 1801.750 kb on + strandat 1801.778 kb on - strand, within MPMX20_01703at 1801.837 kb on + strand, within MPMX20_01703at 1801.848 kb on + strand, within MPMX20_01703at 1801.848 kb on + strand, within MPMX20_01703at 1801.848 kb on + strand, within MPMX20_01703at 1801.856 kb on - strand, within MPMX20_01703at 1801.856 kb on - strand, within MPMX20_01703at 1801.931 kb on + strand, within MPMX20_01703at 1801.931 kb on + strand, within MPMX20_01703at 1801.931 kb on + strand, within MPMX20_01703at 1802.003 kb on - strand, within MPMX20_01703at 1802.011 kb on - strand, within MPMX20_01703at 1802.013 kb on - strand, within MPMX20_01703at 1802.063 kb on - strand, within MPMX20_01703at 1802.076 kb on + strand, within MPMX20_01703at 1802.107 kb on + strand, within MPMX20_01703at 1802.314 kb on - strand, within MPMX20_01703at 1802.340 kb on + strand, within MPMX20_01703at 1802.345 kb on + strand, within MPMX20_01703at 1802.348 kb on - strand, within MPMX20_01703at 1802.353 kb on - strand, within MPMX20_01703at 1802.363 kb on - strand, within MPMX20_01703at 1802.383 kb on + strand, within MPMX20_01703at 1802.391 kb on - strand, within MPMX20_01703at 1802.391 kb on - strand, within MPMX20_01703at 1802.452 kb on - strand, within MPMX20_01703at 1802.518 kb on + strand, within MPMX20_01703at 1802.526 kb on + strand, within MPMX20_01703at 1802.628 kb on + strand, within MPMX20_01703at 1802.629 kb on - strand, within MPMX20_01703at 1802.629 kb on - strand, within MPMX20_01703at 1802.640 kb on + strand, within MPMX20_01703at 1802.648 kb on + strand, within MPMX20_01703at 1802.648 kb on + strand, within MPMX20_01703at 1802.656 kb on - strand, within MPMX20_01703at 1802.658 kb on + strand, within MPMX20_01703at 1802.658 kb on + strand, within MPMX20_01703at 1802.666 kb on - strand, within MPMX20_01703at 1802.725 kb on + strand, within MPMX20_01703at 1802.733 kb on - strand, within MPMX20_01703at 1802.739 kb on + strand, within MPMX20_01703at 1802.820 kb on - strand, within MPMX20_01703at 1802.948 kb on + strand, within MPMX20_01703at 1802.958 kb on + strand, within MPMX20_01703at 1802.966 kb on - strand, within MPMX20_01703at 1803.033 kb on - strandat 1803.080 kb on + strandat 1803.082 kb on + strandat 1803.082 kb on + strandat 1803.082 kb on + strandat 1803.087 kb on + strandat 1803.090 kb on - strandat 1803.090 kb on - strandat 1803.090 kb on - strandat 1803.107 kb on - strandat 1803.145 kb on + strandat 1803.145 kb on + strandat 1803.153 kb on - strandat 1803.153 kb on - strandat 1803.211 kb on + strandat 1803.219 kb on - strandat 1803.219 kb on - strandat 1803.262 kb on - strandat 1803.297 kb on - strand, within MPMX20_01704at 1803.315 kb on + strand, within MPMX20_01704at 1803.406 kb on + strand, within MPMX20_01704at 1803.454 kb on + strand, within MPMX20_01704at 1803.534 kb on - strand, within MPMX20_01704at 1803.542 kb on + strand, within MPMX20_01704at 1803.619 kb on - strandat 1803.628 kb on - strandat 1803.633 kb on + strandat 1803.643 kb on - strandat 1803.643 kb on - strandat 1803.694 kb on + strandat 1803.728 kb on + strandat 1803.733 kb on + strandat 1803.741 kb on + strandat 1803.749 kb on - strandat 1803.774 kb on + strandat 1803.774 kb on + strandat 1803.782 kb on - strandat 1803.790 kb on - strandat 1803.798 kb on + strandat 1803.838 kb on - strand, within MPMX20_01705at 1803.851 kb on - strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.887 kb on + strand, within MPMX20_01705at 1803.895 kb on - strand, within MPMX20_01705at 1803.895 kb on - strand, within MPMX20_01705at 1803.895 kb on - strand, within MPMX20_01705at 1803.895 kb on - strand, within MPMX20_01705at 1803.910 kb on + strand, within MPMX20_01705at 1803.910 kb on + strand, within MPMX20_01705at 1803.910 kb on + strand, within MPMX20_01705at 1803.910 kb on + strand, within MPMX20_01705at 1803.951 kb on - strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.952 kb on + strand, within MPMX20_01705at 1803.960 kb on - strand, within MPMX20_01705at 1803.960 kb on - strand, within MPMX20_01705at 1803.960 kb on - strand, within MPMX20_01705at 1803.980 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.985 kb on + strand, within MPMX20_01705at 1803.987 kb on + strand, within MPMX20_01705at 1803.993 kb on + strand, within MPMX20_01705at 1803.993 kb on - strand, within MPMX20_01705at 1803.993 kb on - strand, within MPMX20_01705at 1803.993 kb on - strand, within MPMX20_01705at 1803.993 kb on - strand, within MPMX20_01705at 1803.999 kb on + strand, within MPMX20_01705at 1804.004 kb on + strand, within MPMX20_01705at 1804.025 kb on + strand, within MPMX20_01705at 1804.025 kb on + strand, within MPMX20_01705at 1804.025 kb on + strand, within MPMX20_01705at 1804.025 kb on + strand, within MPMX20_01705at 1804.025 kb on + strand, within MPMX20_01705at 1804.033 kb on - strand, within MPMX20_01705at 1804.033 kb on - strand, within MPMX20_01705at 1804.033 kb on - strand, within MPMX20_01705at 1804.034 kb on - strand, within MPMX20_01705at 1804.057 kb on + strand, within MPMX20_01705at 1804.061 kb on + strand, within MPMX20_01705at 1804.061 kb on + strand, within MPMX20_01705at 1804.061 kb on + strand, within MPMX20_01705at 1804.065 kb on - strand, within MPMX20_01705at 1804.080 kb on + strand, within MPMX20_01705at 1804.115 kb on - strand, within MPMX20_01705

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,800,692 + MPMX20_01702 0.87 -2.6
1,800,692 + MPMX20_01702 0.87 +1.4
1,800,692 + MPMX20_01702 0.87 -1.4
1,800,692 + MPMX20_01702 0.87 +1.2
1,800,692 + MPMX20_01702 0.87 -2.6
1,800,700 - MPMX20_01702 0.88 -3.3
1,800,704 + MPMX20_01702 0.88 -1.1
1,800,705 - MPMX20_01702 0.88 -2.1
1,800,709 + MPMX20_01702 0.88 -0.9
1,800,709 + MPMX20_01702 0.88 -1.4
1,800,709 + MPMX20_01702 0.88 -1.7
1,800,717 - MPMX20_01702 0.88 +0.4
1,800,734 + MPMX20_01702 0.88 -1.6
1,800,751 - MPMX20_01702 0.89 -1.7
1,800,815 - -2.1
1,800,856 - +0.6
1,800,861 - -0.9
1,801,045 + -0.5
1,801,062 + -1.6
1,801,131 + -0.2
1,801,131 + -2.3
1,801,131 + -1.8
1,801,131 + -0.9
1,801,131 + +0.3
1,801,139 - +1.0
1,801,139 - -2.1
1,801,139 - -3.2
1,801,152 + +0.4
1,801,163 - -1.3
1,801,170 - -0.9
1,801,170 - -1.5
1,801,176 - -0.4
1,801,176 - -4.0
1,801,178 + -0.8
1,801,178 + +0.5
1,801,179 + -1.0
1,801,186 - -0.9
1,801,187 - -1.1
1,801,197 - -0.4
1,801,425 - +2.2
1,801,499 + +1.0
1,801,499 + -3.6
1,801,499 + -0.5
1,801,507 - +1.8
1,801,507 - +0.8
1,801,517 - -1.8
1,801,531 + -1.4
1,801,550 + +0.7
1,801,583 - +0.8
1,801,584 + +0.5
1,801,705 - +1.0
1,801,729 + -1.7
1,801,734 + -0.1
1,801,734 + +0.4
1,801,734 + +2.9
1,801,734 + -2.5
1,801,742 - -2.4
1,801,742 - -1.3
1,801,742 - +0.7
1,801,742 - -3.1
1,801,750 + -1.0
1,801,778 - MPMX20_01703 0.11 -0.2
1,801,837 + MPMX20_01703 0.15 -1.0
1,801,848 + MPMX20_01703 0.16 -3.5
1,801,848 + MPMX20_01703 0.16 -0.4
1,801,848 + MPMX20_01703 0.16 -0.8
1,801,856 - MPMX20_01703 0.16 -0.7
1,801,856 - MPMX20_01703 0.16 -1.3
1,801,931 + MPMX20_01703 0.21 -2.1
1,801,931 + MPMX20_01703 0.21 -0.8
1,801,931 + MPMX20_01703 0.21 -0.7
1,802,003 - MPMX20_01703 0.26 -0.1
1,802,011 - MPMX20_01703 0.26 -0.5
1,802,013 - MPMX20_01703 0.27 -0.1
1,802,063 - MPMX20_01703 0.30 -0.2
1,802,076 + MPMX20_01703 0.31 -3.2
1,802,107 + MPMX20_01703 0.33 -1.3
1,802,314 - MPMX20_01703 0.46 -1.0
1,802,340 + MPMX20_01703 0.48 +1.1
1,802,345 + MPMX20_01703 0.49 -3.3
1,802,348 - MPMX20_01703 0.49 +0.2
1,802,353 - MPMX20_01703 0.49 -0.5
1,802,363 - MPMX20_01703 0.50 -1.6
1,802,383 + MPMX20_01703 0.51 -1.0
1,802,391 - MPMX20_01703 0.52 -2.1
1,802,391 - MPMX20_01703 0.52 -0.4
1,802,452 - MPMX20_01703 0.56 +0.4
1,802,518 + MPMX20_01703 0.60 +2.2
1,802,526 + MPMX20_01703 0.61 -0.2
1,802,628 + MPMX20_01703 0.67 -0.3
1,802,629 - MPMX20_01703 0.67 +0.0
1,802,629 - MPMX20_01703 0.67 +0.6
1,802,640 + MPMX20_01703 0.68 -0.2
1,802,648 + MPMX20_01703 0.69 +0.2
1,802,648 + MPMX20_01703 0.69 +2.2
1,802,656 - MPMX20_01703 0.69 -2.3
1,802,658 + MPMX20_01703 0.69 +1.6
1,802,658 + MPMX20_01703 0.69 -0.6
1,802,666 - MPMX20_01703 0.70 +2.1
1,802,725 + MPMX20_01703 0.74 +1.0
1,802,733 - MPMX20_01703 0.74 -0.5
1,802,739 + MPMX20_01703 0.75 +1.7
1,802,820 - MPMX20_01703 0.80 -0.1
1,802,948 + MPMX20_01703 0.88 +0.2
1,802,958 + MPMX20_01703 0.89 +0.5
1,802,966 - MPMX20_01703 0.90 +1.1
1,803,033 - +0.9
1,803,080 + -0.9
1,803,082 + -0.8
1,803,082 + +1.1
1,803,082 + -2.4
1,803,087 + -1.6
1,803,090 - -1.0
1,803,090 - -2.3
1,803,090 - +0.3
1,803,107 - -0.7
1,803,145 + -1.0
1,803,145 + -0.2
1,803,153 - -1.0
1,803,153 - -1.8
1,803,211 + +1.1
1,803,219 - -1.5
1,803,219 - +0.5
1,803,262 - -0.5
1,803,297 - MPMX20_01704 0.14 -0.2
1,803,315 + MPMX20_01704 0.19 -2.0
1,803,406 + MPMX20_01704 0.40 -3.7
1,803,454 + MPMX20_01704 0.52 -0.1
1,803,534 - MPMX20_01704 0.71 -0.1
1,803,542 + MPMX20_01704 0.73 -1.6
1,803,619 - -1.1
1,803,628 - -1.0
1,803,633 + +0.6
1,803,643 - -0.8
1,803,643 - -2.3
1,803,694 + -0.1
1,803,728 + -2.2
1,803,733 + +2.3
1,803,741 + +0.0
1,803,749 - -1.5
1,803,774 + +0.7
1,803,774 + -0.4
1,803,782 - +0.5
1,803,790 - -0.1
1,803,798 + -0.5
1,803,838 - MPMX20_01705 0.13 -1.7
1,803,851 - MPMX20_01705 0.14 -0.3
1,803,887 + MPMX20_01705 0.17 +0.7
1,803,887 + MPMX20_01705 0.17 +0.7
1,803,887 + MPMX20_01705 0.17 +0.8
1,803,887 + MPMX20_01705 0.17 +1.0
1,803,887 + MPMX20_01705 0.17 -1.7
1,803,887 + MPMX20_01705 0.17 -1.1
1,803,887 + MPMX20_01705 0.17 -2.3
1,803,887 + MPMX20_01705 0.17 -0.5
1,803,887 + MPMX20_01705 0.17 +4.3
1,803,887 + MPMX20_01705 0.17 +0.6
1,803,887 + MPMX20_01705 0.17 -2.1
1,803,887 + MPMX20_01705 0.17 -1.0
1,803,887 + MPMX20_01705 0.17 +1.0
1,803,887 + MPMX20_01705 0.17 -1.7
1,803,887 + MPMX20_01705 0.17 -0.4
1,803,887 + MPMX20_01705 0.17 +1.6
1,803,887 + MPMX20_01705 0.17 -0.4
1,803,887 + MPMX20_01705 0.17 -0.1
1,803,895 - MPMX20_01705 0.17 -0.6
1,803,895 - MPMX20_01705 0.17 -0.3
1,803,895 - MPMX20_01705 0.17 -0.9
1,803,895 - MPMX20_01705 0.17 +0.1
1,803,910 + MPMX20_01705 0.19 -2.8
1,803,910 + MPMX20_01705 0.19 +1.8
1,803,910 + MPMX20_01705 0.19 -1.0
1,803,910 + MPMX20_01705 0.19 +0.7
1,803,951 - MPMX20_01705 0.22 +2.8
1,803,952 + MPMX20_01705 0.22 -1.0
1,803,952 + MPMX20_01705 0.22 +0.2
1,803,952 + MPMX20_01705 0.22 -1.2
1,803,952 + MPMX20_01705 0.22 -1.0
1,803,952 + MPMX20_01705 0.22 -2.5
1,803,952 + MPMX20_01705 0.22 -1.6
1,803,952 + MPMX20_01705 0.22 +0.2
1,803,952 + MPMX20_01705 0.22 +0.1
1,803,952 + MPMX20_01705 0.22 -1.6
1,803,952 + MPMX20_01705 0.22 -1.3
1,803,952 + MPMX20_01705 0.22 -2.4
1,803,960 - MPMX20_01705 0.23 -2.7
1,803,960 - MPMX20_01705 0.23 -0.5
1,803,960 - MPMX20_01705 0.23 -2.1
1,803,980 + MPMX20_01705 0.25 -0.7
1,803,985 + MPMX20_01705 0.25 +0.2
1,803,985 + MPMX20_01705 0.25 +0.7
1,803,985 + MPMX20_01705 0.25 -0.2
1,803,985 + MPMX20_01705 0.25 +0.0
1,803,985 + MPMX20_01705 0.25 -1.6
1,803,985 + MPMX20_01705 0.25 +0.6
1,803,985 + MPMX20_01705 0.25 -2.1
1,803,985 + MPMX20_01705 0.25 -0.9
1,803,987 + MPMX20_01705 0.25 -1.9
1,803,993 + MPMX20_01705 0.26 -3.0
1,803,993 - MPMX20_01705 0.26 +0.8
1,803,993 - MPMX20_01705 0.26 -0.1
1,803,993 - MPMX20_01705 0.26 -1.5
1,803,993 - MPMX20_01705 0.26 -1.4
1,803,999 + MPMX20_01705 0.26 -0.6
1,804,004 + MPMX20_01705 0.27 -1.7
1,804,025 + MPMX20_01705 0.28 -0.6
1,804,025 + MPMX20_01705 0.28 -0.4
1,804,025 + MPMX20_01705 0.28 +0.5
1,804,025 + MPMX20_01705 0.28 -3.5
1,804,025 + MPMX20_01705 0.28 +0.2
1,804,033 - MPMX20_01705 0.29 +1.1
1,804,033 - MPMX20_01705 0.29 +0.4
1,804,033 - MPMX20_01705 0.29 -2.3
1,804,034 - MPMX20_01705 0.29 +1.7
1,804,057 + MPMX20_01705 0.31 -0.3
1,804,061 + MPMX20_01705 0.31 +0.0
1,804,061 + MPMX20_01705 0.31 -1.0
1,804,061 + MPMX20_01705 0.31 -2.0
1,804,065 - MPMX20_01705 0.32 -1.0
1,804,080 + MPMX20_01705 0.33 -0.4
1,804,115 - MPMX20_01705 0.36 -1.4

Or see this region's nucleotide sequence