Experiment: 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01404 and MPMX20_01405 overlap by 17 nucleotides MPMX20_01405 and MPMX20_01406 overlap by 23 nucleotides MPMX20_01406 and MPMX20_01407 overlap by 38 nucleotides
MPMX20_01404: MPMX20_01404 - 8-amino-7-oxononanoate synthase, at 1,467,675 to 1,468,832
_01404
MPMX20_01405: MPMX20_01405 - Malonyl-[acyl-carrier protein] O-methyltransferase, at 1,468,816 to 1,469,571
_01405
MPMX20_01406: MPMX20_01406 - ATP-dependent dethiobiotin synthetase BioD 1, at 1,469,549 to 1,470,265
_01406
MPMX20_01407: MPMX20_01407 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 1,470,228 to 1,470,950
_01407
Position (kb)
1468
1469
1470 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 1467.839 kb on + strand, within MPMX20_01404 at 1467.962 kb on + strand, within MPMX20_01404 at 1467.969 kb on - strand, within MPMX20_01404 at 1468.049 kb on + strand, within MPMX20_01404 at 1468.103 kb on - strand, within MPMX20_01404 at 1468.125 kb on + strand, within MPMX20_01404 at 1468.145 kb on + strand, within MPMX20_01404 at 1468.166 kb on + strand, within MPMX20_01404 at 1468.166 kb on + strand, within MPMX20_01404 at 1468.174 kb on - strand, within MPMX20_01404 at 1468.174 kb on - strand, within MPMX20_01404 at 1468.179 kb on - strand, within MPMX20_01404 at 1468.195 kb on + strand, within MPMX20_01404 at 1468.195 kb on + strand, within MPMX20_01404 at 1468.200 kb on + strand, within MPMX20_01404 at 1468.297 kb on + strand, within MPMX20_01404 at 1468.318 kb on - strand, within MPMX20_01404 at 1468.384 kb on + strand, within MPMX20_01404 at 1468.384 kb on + strand, within MPMX20_01404 at 1468.407 kb on + strand, within MPMX20_01404 at 1468.433 kb on - strand, within MPMX20_01404 at 1468.437 kb on + strand, within MPMX20_01404 at 1468.479 kb on - strand, within MPMX20_01404 at 1468.523 kb on - strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.587 kb on + strand, within MPMX20_01404 at 1468.589 kb on - strand, within MPMX20_01404 at 1468.595 kb on - strand, within MPMX20_01404 at 1468.595 kb on - strand, within MPMX20_01404 at 1468.595 kb on - strand, within MPMX20_01404 at 1468.595 kb on - strand, within MPMX20_01404 at 1468.635 kb on - strand, within MPMX20_01404 at 1468.676 kb on + strand, within MPMX20_01404 at 1468.684 kb on + strand, within MPMX20_01404 at 1468.820 kb on - strand at 1468.879 kb on - strand at 1468.885 kb on + strand at 1468.907 kb on + strand, within MPMX20_01405 at 1468.951 kb on - strand, within MPMX20_01405 at 1468.983 kb on - strand, within MPMX20_01405 at 1469.014 kb on - strand, within MPMX20_01405 at 1469.076 kb on + strand, within MPMX20_01405 at 1469.133 kb on + strand, within MPMX20_01405 at 1469.142 kb on - strand, within MPMX20_01405 at 1469.236 kb on - strand, within MPMX20_01405 at 1469.238 kb on + strand, within MPMX20_01405 at 1469.257 kb on - strand, within MPMX20_01405 at 1469.278 kb on + strand, within MPMX20_01405 at 1469.292 kb on + strand, within MPMX20_01405 at 1469.300 kb on - strand, within MPMX20_01405 at 1469.333 kb on - strand, within MPMX20_01405 at 1469.360 kb on + strand, within MPMX20_01405 at 1469.360 kb on + strand, within MPMX20_01405 at 1469.368 kb on - strand, within MPMX20_01405 at 1469.368 kb on - strand, within MPMX20_01405 at 1469.368 kb on - strand, within MPMX20_01405 at 1469.405 kb on - strand, within MPMX20_01405 at 1469.405 kb on - strand, within MPMX20_01405 at 1469.414 kb on + strand, within MPMX20_01405 at 1469.436 kb on - strand, within MPMX20_01405 at 1469.436 kb on - strand, within MPMX20_01405 at 1469.472 kb on - strand, within MPMX20_01405 at 1469.489 kb on + strand, within MPMX20_01405 at 1469.534 kb on + strand at 1469.632 kb on + strand, within MPMX20_01406 at 1469.640 kb on - strand, within MPMX20_01406 at 1469.640 kb on - strand, within MPMX20_01406 at 1469.713 kb on - strand, within MPMX20_01406 at 1469.718 kb on - strand, within MPMX20_01406 at 1469.754 kb on + strand, within MPMX20_01406 at 1469.754 kb on + strand, within MPMX20_01406 at 1469.769 kb on + strand, within MPMX20_01406 at 1469.790 kb on + strand, within MPMX20_01406 at 1469.813 kb on + strand, within MPMX20_01406 at 1469.836 kb on - strand, within MPMX20_01406 at 1469.836 kb on - strand, within MPMX20_01406 at 1469.877 kb on + strand, within MPMX20_01406 at 1469.925 kb on + strand, within MPMX20_01406 at 1469.945 kb on + strand, within MPMX20_01406 at 1469.945 kb on + strand, within MPMX20_01406 at 1469.953 kb on - strand, within MPMX20_01406 at 1469.980 kb on + strand, within MPMX20_01406 at 1469.985 kb on + strand, within MPMX20_01406 at 1470.018 kb on + strand, within MPMX20_01406 at 1470.116 kb on + strand, within MPMX20_01406 at 1470.291 kb on + strand at 1470.299 kb on - strand at 1470.370 kb on + strand, within MPMX20_01407 at 1470.378 kb on - strand, within MPMX20_01407 at 1470.378 kb on - strand, within MPMX20_01407 at 1470.438 kb on + strand, within MPMX20_01407 at 1470.438 kb on + strand, within MPMX20_01407 at 1470.446 kb on - strand, within MPMX20_01407 at 1470.487 kb on + strand, within MPMX20_01407 at 1470.514 kb on + strand, within MPMX20_01407 at 1470.554 kb on - strand, within MPMX20_01407
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 1,467,839 + MPMX20_01404 0.14 -0.0 1,467,962 + MPMX20_01404 0.25 -0.5 1,467,969 - MPMX20_01404 0.25 -1.9 1,468,049 + MPMX20_01404 0.32 -0.5 1,468,103 - MPMX20_01404 0.37 +1.4 1,468,125 + MPMX20_01404 0.39 +2.9 1,468,145 + MPMX20_01404 0.41 -0.7 1,468,166 + MPMX20_01404 0.42 +2.5 1,468,166 + MPMX20_01404 0.42 -0.1 1,468,174 - MPMX20_01404 0.43 -0.5 1,468,174 - MPMX20_01404 0.43 +0.8 1,468,179 - MPMX20_01404 0.44 +1.6 1,468,195 + MPMX20_01404 0.45 -0.3 1,468,195 + MPMX20_01404 0.45 -1.2 1,468,200 + MPMX20_01404 0.45 +0.3 1,468,297 + MPMX20_01404 0.54 +0.2 1,468,318 - MPMX20_01404 0.56 -1.5 1,468,384 + MPMX20_01404 0.61 -0.6 1,468,384 + MPMX20_01404 0.61 -1.5 1,468,407 + MPMX20_01404 0.63 -0.6 1,468,433 - MPMX20_01404 0.65 -4.7 1,468,437 + MPMX20_01404 0.66 +2.2 1,468,479 - MPMX20_01404 0.69 -0.8 1,468,523 - MPMX20_01404 0.73 -0.2 1,468,587 + MPMX20_01404 0.79 +0.4 1,468,587 + MPMX20_01404 0.79 +2.0 1,468,587 + MPMX20_01404 0.79 -0.2 1,468,587 + MPMX20_01404 0.79 +0.6 1,468,587 + MPMX20_01404 0.79 +0.1 1,468,587 + MPMX20_01404 0.79 +0.2 1,468,589 - MPMX20_01404 0.79 +0.1 1,468,595 - MPMX20_01404 0.79 -0.0 1,468,595 - MPMX20_01404 0.79 +0.9 1,468,595 - MPMX20_01404 0.79 -0.9 1,468,595 - MPMX20_01404 0.79 +0.2 1,468,635 - MPMX20_01404 0.83 -1.3 1,468,676 + MPMX20_01404 0.86 +0.2 1,468,684 + MPMX20_01404 0.87 -0.8 1,468,820 - -0.8 1,468,879 - +0.1 1,468,885 + +0.0 1,468,907 + MPMX20_01405 0.12 -0.4 1,468,951 - MPMX20_01405 0.18 -2.1 1,468,983 - MPMX20_01405 0.22 -0.2 1,469,014 - MPMX20_01405 0.26 -2.7 1,469,076 + MPMX20_01405 0.34 -0.8 1,469,133 + MPMX20_01405 0.42 -0.0 1,469,142 - MPMX20_01405 0.43 +0.7 1,469,236 - MPMX20_01405 0.56 -0.1 1,469,238 + MPMX20_01405 0.56 +0.6 1,469,257 - MPMX20_01405 0.58 +1.1 1,469,278 + MPMX20_01405 0.61 -1.9 1,469,292 + MPMX20_01405 0.63 +6.5 1,469,300 - MPMX20_01405 0.64 -1.7 1,469,333 - MPMX20_01405 0.68 +0.9 1,469,360 + MPMX20_01405 0.72 -2.1 1,469,360 + MPMX20_01405 0.72 +1.2 1,469,368 - MPMX20_01405 0.73 +0.3 1,469,368 - MPMX20_01405 0.73 -2.1 1,469,368 - MPMX20_01405 0.73 -0.6 1,469,405 - MPMX20_01405 0.78 -0.1 1,469,405 - MPMX20_01405 0.78 -3.4 1,469,414 + MPMX20_01405 0.79 +1.2 1,469,436 - MPMX20_01405 0.82 -1.4 1,469,436 - MPMX20_01405 0.82 -0.5 1,469,472 - MPMX20_01405 0.87 -3.0 1,469,489 + MPMX20_01405 0.89 +3.3 1,469,534 + +0.6 1,469,632 + MPMX20_01406 0.12 +0.4 1,469,640 - MPMX20_01406 0.13 +0.6 1,469,640 - MPMX20_01406 0.13 -1.0 1,469,713 - MPMX20_01406 0.23 +0.5 1,469,718 - MPMX20_01406 0.24 -0.2 1,469,754 + MPMX20_01406 0.29 -1.8 1,469,754 + MPMX20_01406 0.29 -1.4 1,469,769 + MPMX20_01406 0.31 +0.3 1,469,790 + MPMX20_01406 0.34 +1.5 1,469,813 + MPMX20_01406 0.37 -1.0 1,469,836 - MPMX20_01406 0.40 -0.5 1,469,836 - MPMX20_01406 0.40 -0.4 1,469,877 + MPMX20_01406 0.46 -0.3 1,469,925 + MPMX20_01406 0.52 -1.0 1,469,945 + MPMX20_01406 0.55 +1.3 1,469,945 + MPMX20_01406 0.55 -0.6 1,469,953 - MPMX20_01406 0.56 -0.3 1,469,980 + MPMX20_01406 0.60 -1.2 1,469,985 + MPMX20_01406 0.61 -1.4 1,470,018 + MPMX20_01406 0.65 -0.1 1,470,116 + MPMX20_01406 0.79 -1.6 1,470,291 + -1.6 1,470,299 - -0.1 1,470,370 + MPMX20_01407 0.20 -1.1 1,470,378 - MPMX20_01407 0.21 -0.6 1,470,378 - MPMX20_01407 0.21 -0.0 1,470,438 + MPMX20_01407 0.29 -1.3 1,470,438 + MPMX20_01407 0.29 -1.6 1,470,446 - MPMX20_01407 0.30 +0.7 1,470,487 + MPMX20_01407 0.36 +1.4 1,470,514 + MPMX20_01407 0.40 -1.0 1,470,554 - MPMX20_01407 0.45 +0.3
Or see this region's nucleotide sequence