Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01405

Experiment: 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01404 and MPMX20_01405 overlap by 17 nucleotidesMPMX20_01405 and MPMX20_01406 overlap by 23 nucleotidesMPMX20_01406 and MPMX20_01407 overlap by 38 nucleotides MPMX20_01404: MPMX20_01404 - 8-amino-7-oxononanoate synthase, at 1,467,675 to 1,468,832 _01404 MPMX20_01405: MPMX20_01405 - Malonyl-[acyl-carrier protein] O-methyltransferase, at 1,468,816 to 1,469,571 _01405 MPMX20_01406: MPMX20_01406 - ATP-dependent dethiobiotin synthetase BioD 1, at 1,469,549 to 1,470,265 _01406 MPMX20_01407: MPMX20_01407 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 1,470,228 to 1,470,950 _01407 Position (kb) 1468 1469 1470Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6at 1467.839 kb on + strand, within MPMX20_01404at 1467.962 kb on + strand, within MPMX20_01404at 1467.969 kb on - strand, within MPMX20_01404at 1468.049 kb on + strand, within MPMX20_01404at 1468.103 kb on - strand, within MPMX20_01404at 1468.125 kb on + strand, within MPMX20_01404at 1468.145 kb on + strand, within MPMX20_01404at 1468.166 kb on + strand, within MPMX20_01404at 1468.166 kb on + strand, within MPMX20_01404at 1468.174 kb on - strand, within MPMX20_01404at 1468.174 kb on - strand, within MPMX20_01404at 1468.179 kb on - strand, within MPMX20_01404at 1468.195 kb on + strand, within MPMX20_01404at 1468.195 kb on + strand, within MPMX20_01404at 1468.200 kb on + strand, within MPMX20_01404at 1468.297 kb on + strand, within MPMX20_01404at 1468.318 kb on - strand, within MPMX20_01404at 1468.384 kb on + strand, within MPMX20_01404at 1468.384 kb on + strand, within MPMX20_01404at 1468.407 kb on + strand, within MPMX20_01404at 1468.433 kb on - strand, within MPMX20_01404at 1468.437 kb on + strand, within MPMX20_01404at 1468.479 kb on - strand, within MPMX20_01404at 1468.523 kb on - strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.587 kb on + strand, within MPMX20_01404at 1468.589 kb on - strand, within MPMX20_01404at 1468.595 kb on - strand, within MPMX20_01404at 1468.595 kb on - strand, within MPMX20_01404at 1468.595 kb on - strand, within MPMX20_01404at 1468.595 kb on - strand, within MPMX20_01404at 1468.635 kb on - strand, within MPMX20_01404at 1468.676 kb on + strand, within MPMX20_01404at 1468.684 kb on + strand, within MPMX20_01404at 1468.820 kb on - strandat 1468.879 kb on - strandat 1468.885 kb on + strandat 1468.907 kb on + strand, within MPMX20_01405at 1468.951 kb on - strand, within MPMX20_01405at 1468.983 kb on - strand, within MPMX20_01405at 1469.014 kb on - strand, within MPMX20_01405at 1469.076 kb on + strand, within MPMX20_01405at 1469.133 kb on + strand, within MPMX20_01405at 1469.142 kb on - strand, within MPMX20_01405at 1469.236 kb on - strand, within MPMX20_01405at 1469.238 kb on + strand, within MPMX20_01405at 1469.257 kb on - strand, within MPMX20_01405at 1469.278 kb on + strand, within MPMX20_01405at 1469.292 kb on + strand, within MPMX20_01405at 1469.300 kb on - strand, within MPMX20_01405at 1469.333 kb on - strand, within MPMX20_01405at 1469.360 kb on + strand, within MPMX20_01405at 1469.360 kb on + strand, within MPMX20_01405at 1469.368 kb on - strand, within MPMX20_01405at 1469.368 kb on - strand, within MPMX20_01405at 1469.368 kb on - strand, within MPMX20_01405at 1469.405 kb on - strand, within MPMX20_01405at 1469.405 kb on - strand, within MPMX20_01405at 1469.414 kb on + strand, within MPMX20_01405at 1469.436 kb on - strand, within MPMX20_01405at 1469.436 kb on - strand, within MPMX20_01405at 1469.472 kb on - strand, within MPMX20_01405at 1469.489 kb on + strand, within MPMX20_01405at 1469.534 kb on + strandat 1469.632 kb on + strand, within MPMX20_01406at 1469.640 kb on - strand, within MPMX20_01406at 1469.640 kb on - strand, within MPMX20_01406at 1469.713 kb on - strand, within MPMX20_01406at 1469.718 kb on - strand, within MPMX20_01406at 1469.754 kb on + strand, within MPMX20_01406at 1469.754 kb on + strand, within MPMX20_01406at 1469.769 kb on + strand, within MPMX20_01406at 1469.790 kb on + strand, within MPMX20_01406at 1469.813 kb on + strand, within MPMX20_01406at 1469.836 kb on - strand, within MPMX20_01406at 1469.836 kb on - strand, within MPMX20_01406at 1469.877 kb on + strand, within MPMX20_01406at 1469.925 kb on + strand, within MPMX20_01406at 1469.945 kb on + strand, within MPMX20_01406at 1469.945 kb on + strand, within MPMX20_01406at 1469.953 kb on - strand, within MPMX20_01406at 1469.980 kb on + strand, within MPMX20_01406at 1469.985 kb on + strand, within MPMX20_01406at 1470.018 kb on + strand, within MPMX20_01406at 1470.116 kb on + strand, within MPMX20_01406at 1470.291 kb on + strandat 1470.299 kb on - strandat 1470.370 kb on + strand, within MPMX20_01407at 1470.378 kb on - strand, within MPMX20_01407at 1470.378 kb on - strand, within MPMX20_01407at 1470.438 kb on + strand, within MPMX20_01407at 1470.438 kb on + strand, within MPMX20_01407at 1470.446 kb on - strand, within MPMX20_01407at 1470.487 kb on + strand, within MPMX20_01407at 1470.514 kb on + strand, within MPMX20_01407at 1470.554 kb on - strand, within MPMX20_01407

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
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1,467,839 + MPMX20_01404 0.14 -0.0
1,467,962 + MPMX20_01404 0.25 -0.5
1,467,969 - MPMX20_01404 0.25 -1.9
1,468,049 + MPMX20_01404 0.32 -0.5
1,468,103 - MPMX20_01404 0.37 +1.4
1,468,125 + MPMX20_01404 0.39 +2.9
1,468,145 + MPMX20_01404 0.41 -0.7
1,468,166 + MPMX20_01404 0.42 +2.5
1,468,166 + MPMX20_01404 0.42 -0.1
1,468,174 - MPMX20_01404 0.43 -0.5
1,468,174 - MPMX20_01404 0.43 +0.8
1,468,179 - MPMX20_01404 0.44 +1.6
1,468,195 + MPMX20_01404 0.45 -0.3
1,468,195 + MPMX20_01404 0.45 -1.2
1,468,200 + MPMX20_01404 0.45 +0.3
1,468,297 + MPMX20_01404 0.54 +0.2
1,468,318 - MPMX20_01404 0.56 -1.5
1,468,384 + MPMX20_01404 0.61 -0.6
1,468,384 + MPMX20_01404 0.61 -1.5
1,468,407 + MPMX20_01404 0.63 -0.6
1,468,433 - MPMX20_01404 0.65 -4.7
1,468,437 + MPMX20_01404 0.66 +2.2
1,468,479 - MPMX20_01404 0.69 -0.8
1,468,523 - MPMX20_01404 0.73 -0.2
1,468,587 + MPMX20_01404 0.79 +0.4
1,468,587 + MPMX20_01404 0.79 +2.0
1,468,587 + MPMX20_01404 0.79 -0.2
1,468,587 + MPMX20_01404 0.79 +0.6
1,468,587 + MPMX20_01404 0.79 +0.1
1,468,587 + MPMX20_01404 0.79 +0.2
1,468,589 - MPMX20_01404 0.79 +0.1
1,468,595 - MPMX20_01404 0.79 -0.0
1,468,595 - MPMX20_01404 0.79 +0.9
1,468,595 - MPMX20_01404 0.79 -0.9
1,468,595 - MPMX20_01404 0.79 +0.2
1,468,635 - MPMX20_01404 0.83 -1.3
1,468,676 + MPMX20_01404 0.86 +0.2
1,468,684 + MPMX20_01404 0.87 -0.8
1,468,820 - -0.8
1,468,879 - +0.1
1,468,885 + +0.0
1,468,907 + MPMX20_01405 0.12 -0.4
1,468,951 - MPMX20_01405 0.18 -2.1
1,468,983 - MPMX20_01405 0.22 -0.2
1,469,014 - MPMX20_01405 0.26 -2.7
1,469,076 + MPMX20_01405 0.34 -0.8
1,469,133 + MPMX20_01405 0.42 -0.0
1,469,142 - MPMX20_01405 0.43 +0.7
1,469,236 - MPMX20_01405 0.56 -0.1
1,469,238 + MPMX20_01405 0.56 +0.6
1,469,257 - MPMX20_01405 0.58 +1.1
1,469,278 + MPMX20_01405 0.61 -1.9
1,469,292 + MPMX20_01405 0.63 +6.5
1,469,300 - MPMX20_01405 0.64 -1.7
1,469,333 - MPMX20_01405 0.68 +0.9
1,469,360 + MPMX20_01405 0.72 -2.1
1,469,360 + MPMX20_01405 0.72 +1.2
1,469,368 - MPMX20_01405 0.73 +0.3
1,469,368 - MPMX20_01405 0.73 -2.1
1,469,368 - MPMX20_01405 0.73 -0.6
1,469,405 - MPMX20_01405 0.78 -0.1
1,469,405 - MPMX20_01405 0.78 -3.4
1,469,414 + MPMX20_01405 0.79 +1.2
1,469,436 - MPMX20_01405 0.82 -1.4
1,469,436 - MPMX20_01405 0.82 -0.5
1,469,472 - MPMX20_01405 0.87 -3.0
1,469,489 + MPMX20_01405 0.89 +3.3
1,469,534 + +0.6
1,469,632 + MPMX20_01406 0.12 +0.4
1,469,640 - MPMX20_01406 0.13 +0.6
1,469,640 - MPMX20_01406 0.13 -1.0
1,469,713 - MPMX20_01406 0.23 +0.5
1,469,718 - MPMX20_01406 0.24 -0.2
1,469,754 + MPMX20_01406 0.29 -1.8
1,469,754 + MPMX20_01406 0.29 -1.4
1,469,769 + MPMX20_01406 0.31 +0.3
1,469,790 + MPMX20_01406 0.34 +1.5
1,469,813 + MPMX20_01406 0.37 -1.0
1,469,836 - MPMX20_01406 0.40 -0.5
1,469,836 - MPMX20_01406 0.40 -0.4
1,469,877 + MPMX20_01406 0.46 -0.3
1,469,925 + MPMX20_01406 0.52 -1.0
1,469,945 + MPMX20_01406 0.55 +1.3
1,469,945 + MPMX20_01406 0.55 -0.6
1,469,953 - MPMX20_01406 0.56 -0.3
1,469,980 + MPMX20_01406 0.60 -1.2
1,469,985 + MPMX20_01406 0.61 -1.4
1,470,018 + MPMX20_01406 0.65 -0.1
1,470,116 + MPMX20_01406 0.79 -1.6
1,470,291 + -1.6
1,470,299 - -0.1
1,470,370 + MPMX20_01407 0.20 -1.1
1,470,378 - MPMX20_01407 0.21 -0.6
1,470,378 - MPMX20_01407 0.21 -0.0
1,470,438 + MPMX20_01407 0.29 -1.3
1,470,438 + MPMX20_01407 0.29 -1.6
1,470,446 - MPMX20_01407 0.30 +0.7
1,470,487 + MPMX20_01407 0.36 +1.4
1,470,514 + MPMX20_01407 0.40 -1.0
1,470,554 - MPMX20_01407 0.45 +0.3

Or see this region's nucleotide sequence