Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03636

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03633 and MPMX20_03634 are separated by 19 nucleotidesMPMX20_03634 and MPMX20_03635 are separated by 166 nucleotidesMPMX20_03635 and MPMX20_03636 are separated by 58 nucleotidesMPMX20_03636 and MPMX20_03637 overlap by 1 nucleotides MPMX20_03633: MPMX20_03633 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,821,492 to 3,822,202 _03633 MPMX20_03634: MPMX20_03634 - Cell division protein FtsB, at 3,822,222 to 3,822,533 _03634 MPMX20_03635: MPMX20_03635 - Inner membrane protein YgbE, at 3,822,700 to 3,823,026 _03635 MPMX20_03636: MPMX20_03636 - Adenylyl-sulfate kinase, at 3,823,085 to 3,823,690 _03636 MPMX20_03637: MPMX20_03637 - Sulfate adenylyltransferase subunit 1, at 3,823,690 to 3,825,114 _03637 Position (kb) 3823 3824Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3822.246 kb on - strandat 3822.246 kb on - strandat 3822.598 kb on - strandat 3822.610 kb on - strandat 3822.653 kb on + strandat 3822.653 kb on + strandat 3822.733 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.801 kb on + strand, within MPMX20_03635at 3822.804 kb on - strand, within MPMX20_03635at 3822.814 kb on - strand, within MPMX20_03635at 3822.861 kb on - strand, within MPMX20_03635at 3822.871 kb on - strand, within MPMX20_03635at 3822.873 kb on + strand, within MPMX20_03635at 3822.873 kb on + strand, within MPMX20_03635at 3822.992 kb on - strand, within MPMX20_03635at 3823.018 kb on + strandat 3823.018 kb on + strandat 3823.062 kb on + strandat 3823.084 kb on + strandat 3823.107 kb on + strandat 3823.112 kb on + strandat 3823.204 kb on - strand, within MPMX20_03636at 3823.420 kb on + strand, within MPMX20_03636at 3823.428 kb on - strand, within MPMX20_03636at 3823.483 kb on - strand, within MPMX20_03636at 3823.510 kb on + strand, within MPMX20_03636at 3823.522 kb on + strand, within MPMX20_03636at 3823.560 kb on + strand, within MPMX20_03636at 3823.565 kb on + strand, within MPMX20_03636at 3823.575 kb on + strand, within MPMX20_03636at 3823.583 kb on - strand, within MPMX20_03636at 3823.588 kb on + strand, within MPMX20_03636at 3823.603 kb on - strand, within MPMX20_03636at 3823.644 kb on - strandat 3823.644 kb on - strandat 3823.644 kb on - strandat 3823.670 kb on + strandat 3823.705 kb on - strandat 3823.784 kb on - strandat 3823.787 kb on + strandat 3823.787 kb on + strandat 3823.787 kb on + strandat 3823.808 kb on - strandat 3823.838 kb on - strand, within MPMX20_03637at 3823.940 kb on - strand, within MPMX20_03637at 3823.940 kb on - strand, within MPMX20_03637at 3823.979 kb on - strand, within MPMX20_03637at 3823.992 kb on + strand, within MPMX20_03637at 3823.999 kb on - strand, within MPMX20_03637at 3824.010 kb on - strand, within MPMX20_03637at 3824.061 kb on - strand, within MPMX20_03637at 3824.061 kb on - strand, within MPMX20_03637at 3824.115 kb on - strand, within MPMX20_03637at 3824.115 kb on - strand, within MPMX20_03637at 3824.194 kb on + strand, within MPMX20_03637at 3824.277 kb on - strand, within MPMX20_03637at 3824.394 kb on - strand, within MPMX20_03637at 3824.431 kb on - strand, within MPMX20_03637at 3824.441 kb on - strand, within MPMX20_03637at 3824.441 kb on - strand, within MPMX20_03637at 3824.631 kb on - strand, within MPMX20_03637at 3824.670 kb on - strand, within MPMX20_03637

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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3,822,246 - +3.8
3,822,246 - +1.4
3,822,598 - -0.3
3,822,610 - +0.0
3,822,653 + +0.5
3,822,653 + +2.3
3,822,733 + MPMX20_03635 0.10 -2.4
3,822,801 + MPMX20_03635 0.31 -1.0
3,822,801 + MPMX20_03635 0.31 -0.9
3,822,801 + MPMX20_03635 0.31 -0.8
3,822,804 - MPMX20_03635 0.32 -0.6
3,822,814 - MPMX20_03635 0.35 +0.2
3,822,861 - MPMX20_03635 0.49 -2.0
3,822,871 - MPMX20_03635 0.52 +0.5
3,822,873 + MPMX20_03635 0.53 +0.5
3,822,873 + MPMX20_03635 0.53 -2.0
3,822,992 - MPMX20_03635 0.89 +1.0
3,823,018 + -0.1
3,823,018 + -0.3
3,823,062 + +0.2
3,823,084 + +0.0
3,823,107 + -0.7
3,823,112 + -1.6
3,823,204 - MPMX20_03636 0.20 -2.4
3,823,420 + MPMX20_03636 0.55 -0.8
3,823,428 - MPMX20_03636 0.57 -1.9
3,823,483 - MPMX20_03636 0.66 -1.2
3,823,510 + MPMX20_03636 0.70 -1.5
3,823,522 + MPMX20_03636 0.72 +1.1
3,823,560 + MPMX20_03636 0.78 -0.7
3,823,565 + MPMX20_03636 0.79 -2.6
3,823,575 + MPMX20_03636 0.81 +0.5
3,823,583 - MPMX20_03636 0.82 -0.5
3,823,588 + MPMX20_03636 0.83 -1.3
3,823,603 - MPMX20_03636 0.85 -3.0
3,823,644 - +0.9
3,823,644 - -0.9
3,823,644 - -1.3
3,823,670 + -2.8
3,823,705 - +2.3
3,823,784 - -0.1
3,823,787 + -0.5
3,823,787 + -2.4
3,823,787 + -1.9
3,823,808 - -2.7
3,823,838 - MPMX20_03637 0.10 -1.3
3,823,940 - MPMX20_03637 0.18 +0.5
3,823,940 - MPMX20_03637 0.18 +1.5
3,823,979 - MPMX20_03637 0.20 -2.5
3,823,992 + MPMX20_03637 0.21 -0.3
3,823,999 - MPMX20_03637 0.22 -0.7
3,824,010 - MPMX20_03637 0.22 +2.3
3,824,061 - MPMX20_03637 0.26 +0.2
3,824,061 - MPMX20_03637 0.26 -0.7
3,824,115 - MPMX20_03637 0.30 +0.5
3,824,115 - MPMX20_03637 0.30 -0.0
3,824,194 + MPMX20_03637 0.35 -2.4
3,824,277 - MPMX20_03637 0.41 +1.2
3,824,394 - MPMX20_03637 0.49 +2.5
3,824,431 - MPMX20_03637 0.52 +1.1
3,824,441 - MPMX20_03637 0.53 +1.5
3,824,441 - MPMX20_03637 0.53 -1.0
3,824,631 - MPMX20_03637 0.66 +1.9
3,824,670 - MPMX20_03637 0.69 -1.8

Or see this region's nucleotide sequence