Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03372

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03371 and MPMX20_03372 are separated by 54 nucleotidesMPMX20_03372 and MPMX20_03373 are separated by 31 nucleotides MPMX20_03371: MPMX20_03371 - Ribose import ATP-binding protein RbsA, at 3,547,935 to 3,549,482 _03371 MPMX20_03372: MPMX20_03372 - Ribose import binding protein RbsB, at 3,549,537 to 3,550,466 _03372 MPMX20_03373: MPMX20_03373 - Myo-inositol 2-dehydrogenase, at 3,550,498 to 3,551,484 _03373 Position (kb) 3549 3550 3551Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 3548.571 kb on + strand, within MPMX20_03371at 3548.575 kb on + strand, within MPMX20_03371at 3548.585 kb on + strand, within MPMX20_03371at 3548.595 kb on + strand, within MPMX20_03371at 3548.595 kb on + strand, within MPMX20_03371at 3548.603 kb on + strand, within MPMX20_03371at 3548.603 kb on - strand, within MPMX20_03371at 3548.603 kb on - strand, within MPMX20_03371at 3548.618 kb on + strand, within MPMX20_03371at 3548.626 kb on - strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.639 kb on + strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.647 kb on - strand, within MPMX20_03371at 3548.948 kb on + strand, within MPMX20_03371at 3548.948 kb on - strand, within MPMX20_03371at 3548.974 kb on + strand, within MPMX20_03371at 3548.993 kb on + strand, within MPMX20_03371at 3549.030 kb on - strand, within MPMX20_03371at 3549.064 kb on + strand, within MPMX20_03371at 3549.065 kb on - strand, within MPMX20_03371at 3549.087 kb on - strand, within MPMX20_03371at 3549.105 kb on + strand, within MPMX20_03371at 3549.159 kb on - strand, within MPMX20_03371at 3549.161 kb on + strand, within MPMX20_03371at 3549.161 kb on + strand, within MPMX20_03371at 3549.169 kb on - strand, within MPMX20_03371at 3549.169 kb on - strand, within MPMX20_03371at 3549.174 kb on - strand, within MPMX20_03371at 3549.334 kb on + strandat 3549.334 kb on + strandat 3549.342 kb on - strandat 3549.379 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.407 kb on + strandat 3549.425 kb on - strandat 3549.425 kb on - strandat 3549.471 kb on + strandat 3549.471 kb on + strandat 3549.479 kb on - strandat 3549.479 kb on - strandat 3549.479 kb on - strandat 3549.480 kb on - strandat 3549.487 kb on - strandat 3549.495 kb on + strandat 3549.495 kb on + strandat 3549.503 kb on - strandat 3549.507 kb on + strandat 3549.508 kb on - strandat 3549.598 kb on + strandat 3549.644 kb on - strand, within MPMX20_03372at 3549.784 kb on + strand, within MPMX20_03372at 3549.839 kb on + strand, within MPMX20_03372at 3549.840 kb on + strand, within MPMX20_03372at 3549.847 kb on - strand, within MPMX20_03372at 3549.896 kb on + strand, within MPMX20_03372at 3549.934 kb on + strand, within MPMX20_03372at 3549.956 kb on + strand, within MPMX20_03372at 3549.956 kb on + strand, within MPMX20_03372at 3549.984 kb on - strand, within MPMX20_03372at 3550.084 kb on + strand, within MPMX20_03372at 3550.139 kb on + strand, within MPMX20_03372at 3550.147 kb on - strand, within MPMX20_03372at 3550.211 kb on - strand, within MPMX20_03372at 3550.235 kb on - strand, within MPMX20_03372at 3550.284 kb on + strand, within MPMX20_03372at 3550.284 kb on + strand, within MPMX20_03372at 3550.287 kb on - strand, within MPMX20_03372at 3550.307 kb on + strand, within MPMX20_03372at 3550.307 kb on + strand, within MPMX20_03372at 3550.376 kb on + strandat 3550.481 kb on + strandat 3550.481 kb on + strandat 3550.481 kb on + strandat 3550.489 kb on - strandat 3550.489 kb on - strandat 3550.489 kb on - strandat 3550.489 kb on - strandat 3550.499 kb on - strandat 3550.654 kb on - strand, within MPMX20_03373at 3550.752 kb on + strand, within MPMX20_03373at 3550.752 kb on + strand, within MPMX20_03373at 3550.760 kb on - strand, within MPMX20_03373at 3550.760 kb on - strand, within MPMX20_03373at 3550.760 kb on - strand, within MPMX20_03373at 3550.767 kb on + strand, within MPMX20_03373at 3550.914 kb on - strand, within MPMX20_03373at 3551.039 kb on - strand, within MPMX20_03373at 3551.039 kb on - strand, within MPMX20_03373at 3551.086 kb on - strand, within MPMX20_03373at 3551.200 kb on - strand, within MPMX20_03373at 3551.201 kb on - strand, within MPMX20_03373at 3551.269 kb on + strand, within MPMX20_03373at 3551.287 kb on - strand, within MPMX20_03373at 3551.322 kb on + strand, within MPMX20_03373at 3551.322 kb on + strand, within MPMX20_03373at 3551.323 kb on + strand, within MPMX20_03373at 3551.330 kb on - strand, within MPMX20_03373at 3551.331 kb on - strand, within MPMX20_03373at 3551.332 kb on + strand, within MPMX20_03373at 3551.340 kb on - strand, within MPMX20_03373at 3551.391 kb on + strandat 3551.399 kb on - strandat 3551.399 kb on - strandat 3551.408 kb on + strandat 3551.408 kb on + strandat 3551.416 kb on - strandat 3551.459 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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3,548,571 + MPMX20_03371 0.41 -0.4
3,548,575 + MPMX20_03371 0.41 +0.9
3,548,585 + MPMX20_03371 0.42 -1.3
3,548,595 + MPMX20_03371 0.43 -0.0
3,548,595 + MPMX20_03371 0.43 +0.2
3,548,603 + MPMX20_03371 0.43 +1.6
3,548,603 - MPMX20_03371 0.43 -0.4
3,548,603 - MPMX20_03371 0.43 -2.1
3,548,618 + MPMX20_03371 0.44 +0.3
3,548,626 - MPMX20_03371 0.45 +0.2
3,548,639 + MPMX20_03371 0.45 +1.1
3,548,639 + MPMX20_03371 0.45 -0.1
3,548,639 + MPMX20_03371 0.45 -0.6
3,548,639 + MPMX20_03371 0.45 -0.8
3,548,647 - MPMX20_03371 0.46 +0.2
3,548,647 - MPMX20_03371 0.46 -1.8
3,548,647 - MPMX20_03371 0.46 -0.4
3,548,647 - MPMX20_03371 0.46 -2.4
3,548,647 - MPMX20_03371 0.46 +0.6
3,548,647 - MPMX20_03371 0.46 -2.7
3,548,647 - MPMX20_03371 0.46 -2.6
3,548,647 - MPMX20_03371 0.46 -0.8
3,548,948 + MPMX20_03371 0.65 -2.1
3,548,948 - MPMX20_03371 0.65 +0.1
3,548,974 + MPMX20_03371 0.67 -1.0
3,548,993 + MPMX20_03371 0.68 -0.8
3,549,030 - MPMX20_03371 0.71 +0.3
3,549,064 + MPMX20_03371 0.73 +6.8
3,549,065 - MPMX20_03371 0.73 -1.6
3,549,087 - MPMX20_03371 0.74 +2.1
3,549,105 + MPMX20_03371 0.76 +1.1
3,549,159 - MPMX20_03371 0.79 -0.6
3,549,161 + MPMX20_03371 0.79 +0.3
3,549,161 + MPMX20_03371 0.79 -0.4
3,549,169 - MPMX20_03371 0.80 +0.3
3,549,169 - MPMX20_03371 0.80 +0.8
3,549,174 - MPMX20_03371 0.80 +0.2
3,549,334 + +0.6
3,549,334 + -1.3
3,549,342 - +0.7
3,549,379 + +2.6
3,549,407 + +0.2
3,549,407 + -0.2
3,549,407 + -0.1
3,549,407 + -0.4
3,549,425 - -0.0
3,549,425 - -1.7
3,549,471 + +1.2
3,549,471 + +1.1
3,549,479 - +0.6
3,549,479 - +0.5
3,549,479 - +1.7
3,549,480 - -0.9
3,549,487 - -0.2
3,549,495 + -2.2
3,549,495 + +0.6
3,549,503 - +2.2
3,549,507 + +2.1
3,549,508 - -0.5
3,549,598 + +0.9
3,549,644 - MPMX20_03372 0.12 -2.8
3,549,784 + MPMX20_03372 0.27 -1.6
3,549,839 + MPMX20_03372 0.32 +0.4
3,549,840 + MPMX20_03372 0.33 +0.6
3,549,847 - MPMX20_03372 0.33 -1.1
3,549,896 + MPMX20_03372 0.39 +0.1
3,549,934 + MPMX20_03372 0.43 +0.4
3,549,956 + MPMX20_03372 0.45 -3.1
3,549,956 + MPMX20_03372 0.45 -0.8
3,549,984 - MPMX20_03372 0.48 -1.1
3,550,084 + MPMX20_03372 0.59 +1.0
3,550,139 + MPMX20_03372 0.65 -2.2
3,550,147 - MPMX20_03372 0.66 +0.2
3,550,211 - MPMX20_03372 0.72 -2.0
3,550,235 - MPMX20_03372 0.75 -1.5
3,550,284 + MPMX20_03372 0.80 +0.8
3,550,284 + MPMX20_03372 0.80 +1.0
3,550,287 - MPMX20_03372 0.81 -0.2
3,550,307 + MPMX20_03372 0.83 -1.7
3,550,307 + MPMX20_03372 0.83 -0.0
3,550,376 + +0.2
3,550,481 + -1.0
3,550,481 + -1.7
3,550,481 + +0.4
3,550,489 - +1.0
3,550,489 - +1.6
3,550,489 - +2.6
3,550,489 - -0.4
3,550,499 - -2.2
3,550,654 - MPMX20_03373 0.16 +0.7
3,550,752 + MPMX20_03373 0.26 +0.3
3,550,752 + MPMX20_03373 0.26 -2.0
3,550,760 - MPMX20_03373 0.27 -1.7
3,550,760 - MPMX20_03373 0.27 -0.6
3,550,760 - MPMX20_03373 0.27 -2.4
3,550,767 + MPMX20_03373 0.27 +1.4
3,550,914 - MPMX20_03373 0.42 +2.9
3,551,039 - MPMX20_03373 0.55 -0.8
3,551,039 - MPMX20_03373 0.55 +0.7
3,551,086 - MPMX20_03373 0.60 -1.8
3,551,200 - MPMX20_03373 0.71 -1.1
3,551,201 - MPMX20_03373 0.71 -2.0
3,551,269 + MPMX20_03373 0.78 +0.6
3,551,287 - MPMX20_03373 0.80 -0.0
3,551,322 + MPMX20_03373 0.83 +1.1
3,551,322 + MPMX20_03373 0.83 -2.3
3,551,323 + MPMX20_03373 0.84 -2.9
3,551,330 - MPMX20_03373 0.84 +2.7
3,551,331 - MPMX20_03373 0.84 -2.7
3,551,332 + MPMX20_03373 0.84 +1.0
3,551,340 - MPMX20_03373 0.85 -0.2
3,551,391 + -1.7
3,551,399 - -2.1
3,551,399 - +2.8
3,551,408 + -1.0
3,551,408 + +2.4
3,551,416 - -1.9
3,551,459 + +0.4

Or see this region's nucleotide sequence