Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03206

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03205 and MPMX20_03206 are separated by 102 nucleotidesMPMX20_03206 and MPMX20_03207 are separated by 6 nucleotides MPMX20_03205: MPMX20_03205 - Chemotaxis protein CheV, at 3,373,985 to 3,374,989 _03205 MPMX20_03206: MPMX20_03206 - NADH-quinone oxidoreductase subunit N, at 3,375,092 to 3,376,549 _03206 MPMX20_03207: MPMX20_03207 - NADH-quinone oxidoreductase subunit M, at 3,376,556 to 3,378,085 _03207 Position (kb) 3375 3376 3377Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3374.111 kb on - strand, within MPMX20_03205at 3374.112 kb on + strand, within MPMX20_03205at 3374.112 kb on + strand, within MPMX20_03205at 3374.112 kb on + strand, within MPMX20_03205at 3374.120 kb on - strand, within MPMX20_03205at 3374.120 kb on - strand, within MPMX20_03205at 3374.120 kb on - strand, within MPMX20_03205at 3374.164 kb on + strand, within MPMX20_03205at 3374.253 kb on + strand, within MPMX20_03205at 3374.305 kb on - strand, within MPMX20_03205at 3374.456 kb on + strand, within MPMX20_03205at 3374.472 kb on + strand, within MPMX20_03205at 3374.476 kb on + strand, within MPMX20_03205at 3374.495 kb on - strand, within MPMX20_03205at 3374.507 kb on + strand, within MPMX20_03205at 3374.536 kb on + strand, within MPMX20_03205at 3374.573 kb on - strand, within MPMX20_03205at 3374.574 kb on - strand, within MPMX20_03205at 3374.624 kb on - strand, within MPMX20_03205at 3374.680 kb on + strand, within MPMX20_03205at 3374.680 kb on + strand, within MPMX20_03205at 3374.686 kb on + strand, within MPMX20_03205at 3374.686 kb on + strand, within MPMX20_03205at 3374.686 kb on + strand, within MPMX20_03205at 3374.688 kb on - strand, within MPMX20_03205at 3374.688 kb on - strand, within MPMX20_03205at 3374.694 kb on - strand, within MPMX20_03205at 3374.694 kb on - strand, within MPMX20_03205at 3374.721 kb on - strand, within MPMX20_03205at 3374.722 kb on + strand, within MPMX20_03205at 3374.731 kb on - strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.757 kb on + strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.765 kb on - strand, within MPMX20_03205at 3374.794 kb on + strand, within MPMX20_03205at 3374.889 kb on + strandat 3374.889 kb on + strandat 3374.927 kb on + strandat 3374.970 kb on + strandat 3374.978 kb on - strandat 3375.008 kb on - strandat 3375.008 kb on - strandat 3375.016 kb on - strandat 3375.018 kb on + strandat 3375.141 kb on - strandat 3375.176 kb on - strandat 3375.282 kb on - strand, within MPMX20_03206at 3375.334 kb on - strand, within MPMX20_03206at 3375.345 kb on + strand, within MPMX20_03206at 3375.365 kb on - strand, within MPMX20_03206at 3375.446 kb on + strand, within MPMX20_03206at 3375.447 kb on + strand, within MPMX20_03206at 3375.455 kb on - strand, within MPMX20_03206at 3375.532 kb on + strand, within MPMX20_03206at 3375.570 kb on - strand, within MPMX20_03206at 3375.619 kb on + strand, within MPMX20_03206at 3375.637 kb on - strand, within MPMX20_03206at 3375.707 kb on + strand, within MPMX20_03206at 3375.728 kb on + strand, within MPMX20_03206at 3375.795 kb on - strand, within MPMX20_03206at 3375.830 kb on + strand, within MPMX20_03206at 3375.831 kb on + strand, within MPMX20_03206at 3375.838 kb on - strand, within MPMX20_03206at 3375.838 kb on - strand, within MPMX20_03206at 3375.898 kb on + strand, within MPMX20_03206at 3375.975 kb on + strand, within MPMX20_03206at 3376.012 kb on - strand, within MPMX20_03206at 3376.022 kb on - strand, within MPMX20_03206at 3376.022 kb on - strand, within MPMX20_03206at 3376.133 kb on - strand, within MPMX20_03206at 3376.150 kb on + strand, within MPMX20_03206at 3376.150 kb on + strand, within MPMX20_03206at 3376.150 kb on + strand, within MPMX20_03206at 3376.150 kb on + strand, within MPMX20_03206at 3376.158 kb on - strand, within MPMX20_03206at 3376.163 kb on + strand, within MPMX20_03206at 3376.166 kb on - strand, within MPMX20_03206at 3376.181 kb on - strand, within MPMX20_03206at 3376.299 kb on + strand, within MPMX20_03206at 3376.310 kb on + strand, within MPMX20_03206at 3376.317 kb on + strand, within MPMX20_03206at 3376.317 kb on + strand, within MPMX20_03206at 3376.320 kb on + strand, within MPMX20_03206at 3376.322 kb on + strand, within MPMX20_03206at 3376.323 kb on - strand, within MPMX20_03206at 3376.349 kb on + strand, within MPMX20_03206at 3376.379 kb on - strand, within MPMX20_03206at 3376.384 kb on - strand, within MPMX20_03206at 3376.402 kb on + strand, within MPMX20_03206at 3376.408 kb on - strandat 3376.432 kb on + strandat 3376.592 kb on + strandat 3376.748 kb on + strand, within MPMX20_03207at 3376.796 kb on + strand, within MPMX20_03207at 3376.837 kb on + strand, within MPMX20_03207at 3376.855 kb on - strand, within MPMX20_03207at 3376.890 kb on + strand, within MPMX20_03207at 3376.983 kb on - strand, within MPMX20_03207at 3377.028 kb on + strand, within MPMX20_03207at 3377.107 kb on + strand, within MPMX20_03207at 3377.154 kb on + strand, within MPMX20_03207at 3377.162 kb on - strand, within MPMX20_03207at 3377.174 kb on + strand, within MPMX20_03207at 3377.175 kb on + strand, within MPMX20_03207at 3377.192 kb on - strand, within MPMX20_03207at 3377.260 kb on + strand, within MPMX20_03207at 3377.265 kb on + strand, within MPMX20_03207at 3377.311 kb on + strand, within MPMX20_03207at 3377.396 kb on + strand, within MPMX20_03207at 3377.408 kb on + strand, within MPMX20_03207at 3377.498 kb on - strand, within MPMX20_03207

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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3,374,111 - MPMX20_03205 0.13 +0.6
3,374,112 + MPMX20_03205 0.13 -1.4
3,374,112 + MPMX20_03205 0.13 -2.3
3,374,112 + MPMX20_03205 0.13 +0.6
3,374,120 - MPMX20_03205 0.13 -1.0
3,374,120 - MPMX20_03205 0.13 +1.1
3,374,120 - MPMX20_03205 0.13 -0.4
3,374,164 + MPMX20_03205 0.18 +0.4
3,374,253 + MPMX20_03205 0.27 +1.9
3,374,305 - MPMX20_03205 0.32 -2.4
3,374,456 + MPMX20_03205 0.47 -1.2
3,374,472 + MPMX20_03205 0.48 +1.2
3,374,476 + MPMX20_03205 0.49 -2.0
3,374,495 - MPMX20_03205 0.51 -1.0
3,374,507 + MPMX20_03205 0.52 +1.2
3,374,536 + MPMX20_03205 0.55 +2.6
3,374,573 - MPMX20_03205 0.59 +1.0
3,374,574 - MPMX20_03205 0.59 +0.6
3,374,624 - MPMX20_03205 0.64 +1.6
3,374,680 + MPMX20_03205 0.69 -2.0
3,374,680 + MPMX20_03205 0.69 +1.7
3,374,686 + MPMX20_03205 0.70 -2.0
3,374,686 + MPMX20_03205 0.70 -1.4
3,374,686 + MPMX20_03205 0.70 -2.6
3,374,688 - MPMX20_03205 0.70 +0.2
3,374,688 - MPMX20_03205 0.70 +0.5
3,374,694 - MPMX20_03205 0.71 +1.6
3,374,694 - MPMX20_03205 0.71 -0.5
3,374,721 - MPMX20_03205 0.73 +4.2
3,374,722 + MPMX20_03205 0.73 -1.2
3,374,731 - MPMX20_03205 0.74 +1.2
3,374,757 + MPMX20_03205 0.77 -1.2
3,374,757 + MPMX20_03205 0.77 +1.0
3,374,757 + MPMX20_03205 0.77 +0.0
3,374,757 + MPMX20_03205 0.77 +2.3
3,374,757 + MPMX20_03205 0.77 -0.8
3,374,757 + MPMX20_03205 0.77 +0.9
3,374,765 - MPMX20_03205 0.78 -2.2
3,374,765 - MPMX20_03205 0.78 +0.8
3,374,765 - MPMX20_03205 0.78 -0.4
3,374,765 - MPMX20_03205 0.78 +0.9
3,374,765 - MPMX20_03205 0.78 -1.8
3,374,765 - MPMX20_03205 0.78 +0.0
3,374,765 - MPMX20_03205 0.78 +0.6
3,374,765 - MPMX20_03205 0.78 +1.6
3,374,794 + MPMX20_03205 0.80 -1.8
3,374,889 + +2.2
3,374,889 + +0.4
3,374,927 + -0.6
3,374,970 + -2.1
3,374,978 - -1.6
3,375,008 - -1.1
3,375,008 - -2.8
3,375,016 - -3.5
3,375,018 + +1.6
3,375,141 - -1.4
3,375,176 - +2.6
3,375,282 - MPMX20_03206 0.13 -0.9
3,375,334 - MPMX20_03206 0.17 -1.2
3,375,345 + MPMX20_03206 0.17 -1.6
3,375,365 - MPMX20_03206 0.19 -1.1
3,375,446 + MPMX20_03206 0.24 +0.0
3,375,447 + MPMX20_03206 0.24 -2.7
3,375,455 - MPMX20_03206 0.25 +0.0
3,375,532 + MPMX20_03206 0.30 -2.4
3,375,570 - MPMX20_03206 0.33 +0.0
3,375,619 + MPMX20_03206 0.36 -0.0
3,375,637 - MPMX20_03206 0.37 +0.6
3,375,707 + MPMX20_03206 0.42 -2.4
3,375,728 + MPMX20_03206 0.44 -0.2
3,375,795 - MPMX20_03206 0.48 -0.7
3,375,830 + MPMX20_03206 0.51 -0.4
3,375,831 + MPMX20_03206 0.51 -0.7
3,375,838 - MPMX20_03206 0.51 -1.0
3,375,838 - MPMX20_03206 0.51 -1.1
3,375,898 + MPMX20_03206 0.55 -1.4
3,375,975 + MPMX20_03206 0.61 -0.2
3,376,012 - MPMX20_03206 0.63 -0.7
3,376,022 - MPMX20_03206 0.64 -0.4
3,376,022 - MPMX20_03206 0.64 -0.6
3,376,133 - MPMX20_03206 0.71 -0.9
3,376,150 + MPMX20_03206 0.73 -0.2
3,376,150 + MPMX20_03206 0.73 -1.2
3,376,150 + MPMX20_03206 0.73 -0.7
3,376,150 + MPMX20_03206 0.73 -0.2
3,376,158 - MPMX20_03206 0.73 +0.6
3,376,163 + MPMX20_03206 0.73 -0.7
3,376,166 - MPMX20_03206 0.74 -1.6
3,376,181 - MPMX20_03206 0.75 -1.1
3,376,299 + MPMX20_03206 0.83 -0.4
3,376,310 + MPMX20_03206 0.84 +1.9
3,376,317 + MPMX20_03206 0.84 -0.2
3,376,317 + MPMX20_03206 0.84 +0.0
3,376,320 + MPMX20_03206 0.84 +0.3
3,376,322 + MPMX20_03206 0.84 -0.7
3,376,323 - MPMX20_03206 0.84 -0.0
3,376,349 + MPMX20_03206 0.86 -1.2
3,376,379 - MPMX20_03206 0.88 -2.1
3,376,384 - MPMX20_03206 0.89 -2.6
3,376,402 + MPMX20_03206 0.90 +0.0
3,376,408 - -2.2
3,376,432 + +0.6
3,376,592 + -0.9
3,376,748 + MPMX20_03207 0.13 -0.9
3,376,796 + MPMX20_03207 0.16 -1.6
3,376,837 + MPMX20_03207 0.18 +1.0
3,376,855 - MPMX20_03207 0.20 -0.2
3,376,890 + MPMX20_03207 0.22 -0.2
3,376,983 - MPMX20_03207 0.28 -1.2
3,377,028 + MPMX20_03207 0.31 -0.3
3,377,107 + MPMX20_03207 0.36 -1.9
3,377,154 + MPMX20_03207 0.39 -0.4
3,377,162 - MPMX20_03207 0.40 +1.6
3,377,174 + MPMX20_03207 0.40 +1.6
3,377,175 + MPMX20_03207 0.40 -0.7
3,377,192 - MPMX20_03207 0.42 -1.2
3,377,260 + MPMX20_03207 0.46 -0.2
3,377,265 + MPMX20_03207 0.46 -2.4
3,377,311 + MPMX20_03207 0.49 -1.0
3,377,396 + MPMX20_03207 0.55 -0.4
3,377,408 + MPMX20_03207 0.56 -0.9
3,377,498 - MPMX20_03207 0.62 +1.0

Or see this region's nucleotide sequence