Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02142

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02141 and MPMX20_02142 are separated by 284 nucleotidesMPMX20_02142 and MPMX20_02143 are separated by 11 nucleotidesMPMX20_02143 and MPMX20_02144 are separated by 8 nucleotides MPMX20_02141: MPMX20_02141 - Bifunctional protein PaaZ, at 2,233,559 to 2,235,598 _02141 MPMX20_02142: MPMX20_02142 - 1,2-phenylacetyl-CoA epoxidase, subunit A, at 2,235,883 to 2,236,812 _02142 MPMX20_02143: MPMX20_02143 - 1,2-phenylacetyl-CoA epoxidase, subunit B, at 2,236,824 to 2,237,111 _02143 MPMX20_02144: MPMX20_02144 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 2,237,120 to 2,237,866 _02144 Position (kb) 2235 2236 2237Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2234.913 kb on - strand, within MPMX20_02141at 2234.913 kb on - strand, within MPMX20_02141at 2235.018 kb on + strand, within MPMX20_02141at 2235.089 kb on - strand, within MPMX20_02141at 2235.173 kb on - strand, within MPMX20_02141at 2235.270 kb on + strand, within MPMX20_02141at 2235.272 kb on + strand, within MPMX20_02141at 2235.272 kb on + strand, within MPMX20_02141at 2235.273 kb on - strand, within MPMX20_02141at 2235.280 kb on - strand, within MPMX20_02141at 2235.332 kb on + strand, within MPMX20_02141at 2235.335 kb on - strand, within MPMX20_02141at 2235.337 kb on + strand, within MPMX20_02141at 2235.340 kb on - strand, within MPMX20_02141at 2235.354 kb on - strand, within MPMX20_02141at 2235.511 kb on - strandat 2235.573 kb on + strandat 2235.688 kb on + strandat 2235.722 kb on + strandat 2235.730 kb on + strandat 2235.762 kb on + strandat 2235.762 kb on + strandat 2235.770 kb on - strandat 2235.791 kb on + strandat 2235.795 kb on + strandat 2235.796 kb on + strandat 2235.796 kb on + strandat 2235.796 kb on + strandat 2235.804 kb on - strandat 2235.875 kb on - strandat 2235.899 kb on + strandat 2235.916 kb on + strandat 2235.916 kb on + strandat 2235.917 kb on - strandat 2235.919 kb on - strandat 2235.924 kb on - strandat 2236.057 kb on - strand, within MPMX20_02142at 2236.140 kb on + strand, within MPMX20_02142at 2236.143 kb on - strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.216 kb on + strand, within MPMX20_02142at 2236.219 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.224 kb on - strand, within MPMX20_02142at 2236.280 kb on + strand, within MPMX20_02142at 2236.290 kb on + strand, within MPMX20_02142at 2236.293 kb on - strand, within MPMX20_02142at 2236.359 kb on + strand, within MPMX20_02142at 2236.472 kb on - strand, within MPMX20_02142at 2236.477 kb on - strand, within MPMX20_02142at 2236.615 kb on - strand, within MPMX20_02142at 2236.678 kb on - strand, within MPMX20_02142at 2236.728 kb on + strandat 2236.748 kb on + strandat 2236.748 kb on + strandat 2236.955 kb on - strand, within MPMX20_02143at 2236.955 kb on - strand, within MPMX20_02143at 2236.956 kb on - strand, within MPMX20_02143at 2237.028 kb on + strand, within MPMX20_02143at 2237.103 kb on - strandat 2237.105 kb on + strandat 2237.113 kb on - strandat 2237.113 kb on - strandat 2237.113 kb on - strandat 2237.293 kb on + strand, within MPMX20_02144at 2237.308 kb on - strand, within MPMX20_02144at 2237.347 kb on + strand, within MPMX20_02144at 2237.374 kb on + strand, within MPMX20_02144at 2237.413 kb on - strand, within MPMX20_02144at 2237.461 kb on - strand, within MPMX20_02144at 2237.461 kb on - strand, within MPMX20_02144at 2237.511 kb on + strand, within MPMX20_02144at 2237.568 kb on + strand, within MPMX20_02144at 2237.601 kb on + strand, within MPMX20_02144at 2237.619 kb on - strand, within MPMX20_02144at 2237.624 kb on - strand, within MPMX20_02144at 2237.626 kb on + strand, within MPMX20_02144at 2237.683 kb on - strand, within MPMX20_02144at 2237.716 kb on + strand, within MPMX20_02144at 2237.746 kb on - strand, within MPMX20_02144at 2237.776 kb on + strand, within MPMX20_02144

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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2,234,913 - MPMX20_02141 0.66 -2.3
2,234,913 - MPMX20_02141 0.66 -1.6
2,235,018 + MPMX20_02141 0.72 +1.0
2,235,089 - MPMX20_02141 0.75 -3.3
2,235,173 - MPMX20_02141 0.79 +0.3
2,235,270 + MPMX20_02141 0.84 -1.0
2,235,272 + MPMX20_02141 0.84 +0.0
2,235,272 + MPMX20_02141 0.84 -1.9
2,235,273 - MPMX20_02141 0.84 -3.7
2,235,280 - MPMX20_02141 0.84 -1.1
2,235,332 + MPMX20_02141 0.87 -0.2
2,235,335 - MPMX20_02141 0.87 +1.0
2,235,337 + MPMX20_02141 0.87 -2.3
2,235,340 - MPMX20_02141 0.87 -1.2
2,235,354 - MPMX20_02141 0.88 -2.2
2,235,511 - -1.9
2,235,573 + -2.3
2,235,688 + -1.5
2,235,722 + -1.3
2,235,730 + +0.2
2,235,762 + -0.5
2,235,762 + -0.7
2,235,770 - +1.4
2,235,791 + -0.7
2,235,795 + -2.5
2,235,796 + +0.6
2,235,796 + -0.8
2,235,796 + -1.5
2,235,804 - +0.9
2,235,875 - +0.4
2,235,899 + +1.6
2,235,916 + -0.4
2,235,916 + +0.0
2,235,917 - -1.8
2,235,919 - -2.3
2,235,924 - +0.3
2,236,057 - MPMX20_02142 0.19 +0.0
2,236,140 + MPMX20_02142 0.28 -0.7
2,236,143 - MPMX20_02142 0.28 -1.8
2,236,216 + MPMX20_02142 0.36 -3.0
2,236,216 + MPMX20_02142 0.36 -2.7
2,236,216 + MPMX20_02142 0.36 -2.3
2,236,216 + MPMX20_02142 0.36 -2.3
2,236,216 + MPMX20_02142 0.36 -2.1
2,236,216 + MPMX20_02142 0.36 +0.0
2,236,219 - MPMX20_02142 0.36 +2.6
2,236,224 - MPMX20_02142 0.37 +1.6
2,236,224 - MPMX20_02142 0.37 -1.5
2,236,224 - MPMX20_02142 0.37 -0.5
2,236,224 - MPMX20_02142 0.37 -1.2
2,236,224 - MPMX20_02142 0.37 -3.5
2,236,224 - MPMX20_02142 0.37 -1.8
2,236,280 + MPMX20_02142 0.43 +3.6
2,236,290 + MPMX20_02142 0.44 -1.4
2,236,293 - MPMX20_02142 0.44 -0.4
2,236,359 + MPMX20_02142 0.51 +3.6
2,236,472 - MPMX20_02142 0.63 -1.5
2,236,477 - MPMX20_02142 0.64 -1.1
2,236,615 - MPMX20_02142 0.79 -4.3
2,236,678 - MPMX20_02142 0.85 +0.2
2,236,728 + -1.8
2,236,748 + +0.6
2,236,748 + -2.1
2,236,955 - MPMX20_02143 0.45 -1.3
2,236,955 - MPMX20_02143 0.45 -2.1
2,236,956 - MPMX20_02143 0.46 +0.2
2,237,028 + MPMX20_02143 0.71 -2.2
2,237,103 - -3.1
2,237,105 + +0.0
2,237,113 - -0.5
2,237,113 - -0.9
2,237,113 - +0.2
2,237,293 + MPMX20_02144 0.23 -0.3
2,237,308 - MPMX20_02144 0.25 -1.1
2,237,347 + MPMX20_02144 0.30 -1.9
2,237,374 + MPMX20_02144 0.34 +1.1
2,237,413 - MPMX20_02144 0.39 +3.5
2,237,461 - MPMX20_02144 0.46 +1.3
2,237,461 - MPMX20_02144 0.46 -1.7
2,237,511 + MPMX20_02144 0.52 -2.9
2,237,568 + MPMX20_02144 0.60 -2.1
2,237,601 + MPMX20_02144 0.64 -0.5
2,237,619 - MPMX20_02144 0.67 -0.9
2,237,624 - MPMX20_02144 0.67 -3.7
2,237,626 + MPMX20_02144 0.68 -0.4
2,237,683 - MPMX20_02144 0.75 -0.5
2,237,716 + MPMX20_02144 0.80 +2.3
2,237,746 - MPMX20_02144 0.84 -0.5
2,237,776 + MPMX20_02144 0.88 -0.5

Or see this region's nucleotide sequence