Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02137

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02136 and MPMX20_02137 are separated by 241 nucleotidesMPMX20_02137 and MPMX20_02138 are separated by 41 nucleotides MPMX20_02136: MPMX20_02136 - Transcriptional activator FeaR, at 2,225,104 to 2,226,012 _02136 MPMX20_02137: MPMX20_02137 - Phenylacetaldehyde dehydrogenase, at 2,226,254 to 2,227,753 _02137 MPMX20_02138: MPMX20_02138 - hypothetical protein, at 2,227,795 to 2,228,901 _02138 Position (kb) 2226 2227 2228Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6 7 8at 2225.256 kb on + strand, within MPMX20_02136at 2225.256 kb on + strand, within MPMX20_02136at 2225.256 kb on + strand, within MPMX20_02136at 2225.296 kb on - strand, within MPMX20_02136at 2225.324 kb on - strand, within MPMX20_02136at 2225.382 kb on + strand, within MPMX20_02136at 2225.404 kb on - strand, within MPMX20_02136at 2225.560 kb on + strand, within MPMX20_02136at 2225.567 kb on + strand, within MPMX20_02136at 2225.569 kb on + strand, within MPMX20_02136at 2225.618 kb on + strand, within MPMX20_02136at 2225.705 kb on + strand, within MPMX20_02136at 2225.713 kb on - strand, within MPMX20_02136at 2225.713 kb on - strand, within MPMX20_02136at 2225.739 kb on - strand, within MPMX20_02136at 2225.739 kb on - strand, within MPMX20_02136at 2225.739 kb on - strand, within MPMX20_02136at 2225.754 kb on - strand, within MPMX20_02136at 2225.792 kb on + strand, within MPMX20_02136at 2225.844 kb on + strand, within MPMX20_02136at 2225.847 kb on - strand, within MPMX20_02136at 2225.847 kb on - strand, within MPMX20_02136at 2225.852 kb on - strand, within MPMX20_02136at 2225.852 kb on - strand, within MPMX20_02136at 2225.852 kb on - strand, within MPMX20_02136at 2225.882 kb on - strand, within MPMX20_02136at 2225.986 kb on - strandat 2225.988 kb on + strandat 2226.124 kb on - strandat 2226.149 kb on + strandat 2226.157 kb on - strandat 2226.160 kb on - strandat 2226.160 kb on - strandat 2226.206 kb on + strandat 2226.217 kb on + strandat 2226.225 kb on - strandat 2226.225 kb on - strandat 2226.225 kb on - strandat 2226.250 kb on + strandat 2226.264 kb on - strandat 2226.349 kb on - strandat 2226.428 kb on + strand, within MPMX20_02137at 2226.475 kb on - strand, within MPMX20_02137at 2226.512 kb on - strand, within MPMX20_02137at 2226.546 kb on + strand, within MPMX20_02137at 2226.546 kb on + strand, within MPMX20_02137at 2226.554 kb on - strand, within MPMX20_02137at 2226.554 kb on - strand, within MPMX20_02137at 2226.554 kb on - strand, within MPMX20_02137at 2226.570 kb on - strand, within MPMX20_02137at 2226.580 kb on + strand, within MPMX20_02137at 2226.606 kb on + strand, within MPMX20_02137at 2226.606 kb on + strand, within MPMX20_02137at 2226.645 kb on + strand, within MPMX20_02137at 2226.645 kb on + strand, within MPMX20_02137at 2226.653 kb on - strand, within MPMX20_02137at 2226.658 kb on - strand, within MPMX20_02137at 2226.685 kb on - strand, within MPMX20_02137at 2226.685 kb on - strand, within MPMX20_02137at 2226.686 kb on - strand, within MPMX20_02137at 2226.697 kb on - strand, within MPMX20_02137at 2226.729 kb on - strand, within MPMX20_02137at 2226.759 kb on + strand, within MPMX20_02137at 2226.767 kb on - strand, within MPMX20_02137at 2226.828 kb on + strand, within MPMX20_02137at 2226.894 kb on + strand, within MPMX20_02137at 2226.927 kb on - strand, within MPMX20_02137at 2226.949 kb on + strand, within MPMX20_02137at 2226.949 kb on + strand, within MPMX20_02137at 2227.002 kb on + strand, within MPMX20_02137at 2227.149 kb on + strand, within MPMX20_02137at 2227.160 kb on + strand, within MPMX20_02137at 2227.227 kb on + strand, within MPMX20_02137at 2227.235 kb on - strand, within MPMX20_02137at 2227.262 kb on - strand, within MPMX20_02137at 2227.262 kb on - strand, within MPMX20_02137at 2227.272 kb on + strand, within MPMX20_02137at 2227.330 kb on - strand, within MPMX20_02137at 2227.398 kb on + strand, within MPMX20_02137at 2227.477 kb on + strand, within MPMX20_02137at 2227.477 kb on + strand, within MPMX20_02137at 2227.614 kb on - strandat 2227.637 kb on - strandat 2227.675 kb on + strandat 2227.675 kb on + strandat 2227.748 kb on - strandat 2227.762 kb on + strandat 2227.853 kb on - strandat 2227.857 kb on + strandat 2227.906 kb on + strand, within MPMX20_02138at 2227.937 kb on - strand, within MPMX20_02138at 2228.097 kb on + strand, within MPMX20_02138at 2228.115 kb on - strand, within MPMX20_02138at 2228.133 kb on + strand, within MPMX20_02138at 2228.135 kb on + strand, within MPMX20_02138at 2228.135 kb on + strand, within MPMX20_02138at 2228.261 kb on - strand, within MPMX20_02138at 2228.279 kb on + strand, within MPMX20_02138at 2228.313 kb on + strand, within MPMX20_02138at 2228.331 kb on + strand, within MPMX20_02138at 2228.395 kb on - strand, within MPMX20_02138at 2228.395 kb on - strand, within MPMX20_02138at 2228.410 kb on + strand, within MPMX20_02138at 2228.417 kb on - strand, within MPMX20_02138at 2228.434 kb on + strand, within MPMX20_02138at 2228.453 kb on + strand, within MPMX20_02138at 2228.498 kb on - strand, within MPMX20_02138at 2228.498 kb on - strand, within MPMX20_02138at 2228.540 kb on + strand, within MPMX20_02138at 2228.548 kb on - strand, within MPMX20_02138at 2228.548 kb on - strand, within MPMX20_02138at 2228.548 kb on - strand, within MPMX20_02138

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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2,225,256 + MPMX20_02136 0.17 +0.3
2,225,256 + MPMX20_02136 0.17 -1.9
2,225,256 + MPMX20_02136 0.17 -0.2
2,225,296 - MPMX20_02136 0.21 +0.3
2,225,324 - MPMX20_02136 0.24 -0.4
2,225,382 + MPMX20_02136 0.31 +0.7
2,225,404 - MPMX20_02136 0.33 +0.6
2,225,560 + MPMX20_02136 0.50 -1.1
2,225,567 + MPMX20_02136 0.51 -0.0
2,225,569 + MPMX20_02136 0.51 +0.0
2,225,618 + MPMX20_02136 0.57 -2.7
2,225,705 + MPMX20_02136 0.66 +0.6
2,225,713 - MPMX20_02136 0.67 +3.1
2,225,713 - MPMX20_02136 0.67 -3.2
2,225,739 - MPMX20_02136 0.70 +2.0
2,225,739 - MPMX20_02136 0.70 -1.3
2,225,739 - MPMX20_02136 0.70 -0.5
2,225,754 - MPMX20_02136 0.72 +1.6
2,225,792 + MPMX20_02136 0.76 -0.7
2,225,844 + MPMX20_02136 0.81 -1.5
2,225,847 - MPMX20_02136 0.82 -3.3
2,225,847 - MPMX20_02136 0.82 -2.9
2,225,852 - MPMX20_02136 0.82 -0.5
2,225,852 - MPMX20_02136 0.82 +0.6
2,225,852 - MPMX20_02136 0.82 +1.1
2,225,882 - MPMX20_02136 0.86 -4.1
2,225,986 - +0.5
2,225,988 + +0.0
2,226,124 - +0.1
2,226,149 + +0.4
2,226,157 - -0.6
2,226,160 - +0.2
2,226,160 - -0.5
2,226,206 + +0.8
2,226,217 + +1.4
2,226,225 - -1.5
2,226,225 - -1.3
2,226,225 - -0.6
2,226,250 + +1.8
2,226,264 - +0.2
2,226,349 - +1.6
2,226,428 + MPMX20_02137 0.12 +0.2
2,226,475 - MPMX20_02137 0.15 -3.3
2,226,512 - MPMX20_02137 0.17 -1.8
2,226,546 + MPMX20_02137 0.19 -0.5
2,226,546 + MPMX20_02137 0.19 -0.4
2,226,554 - MPMX20_02137 0.20 -1.1
2,226,554 - MPMX20_02137 0.20 -2.3
2,226,554 - MPMX20_02137 0.20 -0.4
2,226,570 - MPMX20_02137 0.21 +0.2
2,226,580 + MPMX20_02137 0.22 +0.9
2,226,606 + MPMX20_02137 0.23 -0.7
2,226,606 + MPMX20_02137 0.23 -0.2
2,226,645 + MPMX20_02137 0.26 -1.5
2,226,645 + MPMX20_02137 0.26 -1.0
2,226,653 - MPMX20_02137 0.27 -2.6
2,226,658 - MPMX20_02137 0.27 -0.8
2,226,685 - MPMX20_02137 0.29 -0.4
2,226,685 - MPMX20_02137 0.29 +0.0
2,226,686 - MPMX20_02137 0.29 -1.1
2,226,697 - MPMX20_02137 0.30 -3.4
2,226,729 - MPMX20_02137 0.32 +1.1
2,226,759 + MPMX20_02137 0.34 -3.8
2,226,767 - MPMX20_02137 0.34 -1.8
2,226,828 + MPMX20_02137 0.38 -2.4
2,226,894 + MPMX20_02137 0.43 -2.9
2,226,927 - MPMX20_02137 0.45 -1.8
2,226,949 + MPMX20_02137 0.46 +1.1
2,226,949 + MPMX20_02137 0.46 -2.0
2,227,002 + MPMX20_02137 0.50 -1.1
2,227,149 + MPMX20_02137 0.60 -1.2
2,227,160 + MPMX20_02137 0.60 -2.7
2,227,227 + MPMX20_02137 0.65 -0.7
2,227,235 - MPMX20_02137 0.65 -1.9
2,227,262 - MPMX20_02137 0.67 -0.8
2,227,262 - MPMX20_02137 0.67 +1.6
2,227,272 + MPMX20_02137 0.68 +1.3
2,227,330 - MPMX20_02137 0.72 -2.2
2,227,398 + MPMX20_02137 0.76 +8.5
2,227,477 + MPMX20_02137 0.82 -2.6
2,227,477 + MPMX20_02137 0.82 +2.0
2,227,614 - +1.1
2,227,637 - +0.6
2,227,675 + -0.5
2,227,675 + -0.2
2,227,748 - +0.3
2,227,762 + +0.4
2,227,853 - -1.3
2,227,857 + +1.2
2,227,906 + MPMX20_02138 0.10 +0.0
2,227,937 - MPMX20_02138 0.13 -0.5
2,228,097 + MPMX20_02138 0.27 -1.9
2,228,115 - MPMX20_02138 0.29 +1.7
2,228,133 + MPMX20_02138 0.31 +2.0
2,228,135 + MPMX20_02138 0.31 -1.1
2,228,135 + MPMX20_02138 0.31 +1.1
2,228,261 - MPMX20_02138 0.42 +1.0
2,228,279 + MPMX20_02138 0.44 +1.5
2,228,313 + MPMX20_02138 0.47 -1.3
2,228,331 + MPMX20_02138 0.48 +1.5
2,228,395 - MPMX20_02138 0.54 -2.1
2,228,395 - MPMX20_02138 0.54 +1.0
2,228,410 + MPMX20_02138 0.56 -1.5
2,228,417 - MPMX20_02138 0.56 +5.1
2,228,434 + MPMX20_02138 0.58 -1.5
2,228,453 + MPMX20_02138 0.59 +1.6
2,228,498 - MPMX20_02138 0.64 -0.2
2,228,498 - MPMX20_02138 0.64 +0.2
2,228,540 + MPMX20_02138 0.67 -2.5
2,228,548 - MPMX20_02138 0.68 +3.6
2,228,548 - MPMX20_02138 0.68 +0.2
2,228,548 - MPMX20_02138 0.68 -3.4

Or see this region's nucleotide sequence