Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02125 and MPMX20_02126 are separated by 568 nucleotides MPMX20_02126 and MPMX20_02127 are separated by 466 nucleotides
MPMX20_02125: MPMX20_02125 - putative oxidoreductase, at 2,213,819 to 2,214,565
_02125
MPMX20_02126: MPMX20_02126 - hypothetical protein, at 2,215,134 to 2,215,586
_02126
MPMX20_02127: MPMX20_02127 - Aspartate-semialdehyde dehydrogenase, at 2,216,053 to 2,217,171
_02127
Position (kb)
2215
2216 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2214.152 kb on - strand, within MPMX20_02125 at 2214.152 kb on - strand, within MPMX20_02125 at 2214.154 kb on - strand, within MPMX20_02125 at 2214.190 kb on - strand, within MPMX20_02125 at 2214.190 kb on - strand, within MPMX20_02125 at 2214.190 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.201 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.211 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.213 kb on - strand, within MPMX20_02125 at 2214.220 kb on + strand, within MPMX20_02125 at 2214.260 kb on - strand, within MPMX20_02125 at 2214.265 kb on - strand, within MPMX20_02125 at 2214.270 kb on - strand, within MPMX20_02125 at 2214.270 kb on - strand, within MPMX20_02125 at 2214.270 kb on - strand, within MPMX20_02125 at 2214.270 kb on - strand, within MPMX20_02125 at 2214.270 kb on - strand, within MPMX20_02125 at 2214.315 kb on - strand, within MPMX20_02125 at 2214.315 kb on - strand, within MPMX20_02125 at 2214.315 kb on - strand, within MPMX20_02125 at 2214.338 kb on - strand, within MPMX20_02125 at 2214.396 kb on + strand, within MPMX20_02125 at 2214.439 kb on + strand, within MPMX20_02125 at 2214.447 kb on - strand, within MPMX20_02125 at 2214.447 kb on - strand, within MPMX20_02125 at 2214.458 kb on + strand, within MPMX20_02125 at 2214.459 kb on + strand, within MPMX20_02125 at 2214.459 kb on + strand, within MPMX20_02125 at 2214.492 kb on + strand at 2214.499 kb on - strand at 2214.506 kb on + strand at 2214.535 kb on + strand at 2214.551 kb on + strand at 2214.592 kb on + strand at 2214.595 kb on + strand at 2214.595 kb on + strand at 2214.595 kb on + strand at 2214.595 kb on + strand at 2214.597 kb on + strand at 2214.603 kb on - strand at 2214.603 kb on - strand at 2214.603 kb on - strand at 2214.603 kb on - strand at 2214.605 kb on + strand at 2214.605 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.622 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.632 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.652 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.662 kb on + strand at 2214.698 kb on + strand at 2214.746 kb on + strand at 2214.760 kb on + strand at 2214.810 kb on + strand at 2214.810 kb on + strand at 2214.810 kb on + strand at 2214.810 kb on + strand at 2214.810 kb on + strand at 2214.810 kb on + strand at 2214.820 kb on + strand at 2214.829 kb on + strand at 2214.829 kb on + strand at 2214.829 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.834 kb on + strand at 2214.850 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.851 kb on + strand at 2214.896 kb on + strand at 2214.901 kb on + strand at 2215.676 kb on - strand at 2215.725 kb on + strand at 2215.730 kb on + strand at 2215.735 kb on + strand at 2215.766 kb on + strand at 2215.766 kb on + strand at 2215.766 kb on + strand at 2215.766 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.778 kb on + strand at 2215.779 kb on + strand at 2215.794 kb on + strand at 2215.802 kb on + strand at 2215.802 kb on + strand at 2215.805 kb on + strand at 2215.811 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.813 kb on + strand at 2215.818 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.823 kb on + strand at 2215.824 kb on + strand at 2215.835 kb on + strand at 2215.835 kb on + strand at 2215.841 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 remove 2,214,152 - MPMX20_02125 0.45 -1.1 2,214,152 - MPMX20_02125 0.45 +1.0 2,214,154 - MPMX20_02125 0.45 +1.5 2,214,190 - MPMX20_02125 0.50 +0.3 2,214,190 - MPMX20_02125 0.50 -1.2 2,214,190 - MPMX20_02125 0.50 -2.7 2,214,201 - MPMX20_02125 0.51 +1.0 2,214,201 - MPMX20_02125 0.51 +2.2 2,214,201 - MPMX20_02125 0.51 -0.7 2,214,201 - MPMX20_02125 0.51 +0.3 2,214,201 - MPMX20_02125 0.51 +1.8 2,214,201 - MPMX20_02125 0.51 +0.3 2,214,211 - MPMX20_02125 0.52 +2.6 2,214,211 - MPMX20_02125 0.52 +0.6 2,214,211 - MPMX20_02125 0.52 -1.7 2,214,211 - MPMX20_02125 0.52 -1.4 2,214,211 - MPMX20_02125 0.52 -1.7 2,214,211 - MPMX20_02125 0.52 +1.0 2,214,211 - MPMX20_02125 0.52 +2.6 2,214,211 - MPMX20_02125 0.52 +1.6 2,214,211 - MPMX20_02125 0.52 +0.0 2,214,211 - MPMX20_02125 0.52 +4.2 2,214,211 - MPMX20_02125 0.52 -1.7 2,214,211 - MPMX20_02125 0.52 -1.0 2,214,213 - MPMX20_02125 0.53 -0.2 2,214,213 - MPMX20_02125 0.53 +1.7 2,214,213 - MPMX20_02125 0.53 +2.0 2,214,213 - MPMX20_02125 0.53 -0.8 2,214,213 - MPMX20_02125 0.53 -1.4 2,214,213 - MPMX20_02125 0.53 +1.6 2,214,213 - MPMX20_02125 0.53 -0.7 2,214,220 + MPMX20_02125 0.54 -1.1 2,214,260 - MPMX20_02125 0.59 -0.9 2,214,265 - MPMX20_02125 0.60 +1.0 2,214,270 - MPMX20_02125 0.60 +1.1 2,214,270 - MPMX20_02125 0.60 -0.2 2,214,270 - MPMX20_02125 0.60 +0.5 2,214,270 - MPMX20_02125 0.60 +1.6 2,214,270 - MPMX20_02125 0.60 +1.4 2,214,315 - MPMX20_02125 0.66 -0.5 2,214,315 - MPMX20_02125 0.66 +0.6 2,214,315 - MPMX20_02125 0.66 -2.4 2,214,338 - MPMX20_02125 0.69 +1.4 2,214,396 + MPMX20_02125 0.77 +0.6 2,214,439 + MPMX20_02125 0.83 +0.6 2,214,447 - MPMX20_02125 0.84 +2.4 2,214,447 - MPMX20_02125 0.84 +1.0 2,214,458 + MPMX20_02125 0.86 -2.1 2,214,459 + MPMX20_02125 0.86 -0.8 2,214,459 + MPMX20_02125 0.86 +1.8 2,214,492 + +0.0 2,214,499 - -1.5 2,214,506 + -1.2 2,214,535 + +0.3 2,214,551 + +0.6 2,214,592 + -1.0 2,214,595 + +1.2 2,214,595 + +3.0 2,214,595 + +1.9 2,214,595 + +2.4 2,214,597 + +1.6 2,214,603 - +0.0 2,214,603 - -1.2 2,214,603 - -0.5 2,214,603 - -0.2 2,214,605 + -1.0 2,214,605 + +1.6 2,214,622 + -1.5 2,214,622 + -1.5 2,214,622 + +0.6 2,214,622 + -0.7 2,214,622 + +1.0 2,214,622 + -0.2 2,214,622 + +0.0 2,214,622 + +0.0 2,214,622 + +1.5 2,214,632 + +0.5 2,214,632 + -1.2 2,214,632 + -1.2 2,214,632 + -1.1 2,214,632 + +0.0 2,214,632 + +1.6 2,214,632 + -0.4 2,214,632 + -0.5 2,214,632 + -0.5 2,214,632 + -1.1 2,214,632 + +2.6 2,214,632 + -0.5 2,214,632 + +0.6 2,214,632 + +3.3 2,214,632 + -0.8 2,214,632 + -0.2 2,214,632 + +0.3 2,214,632 + -2.3 2,214,632 + -1.4 2,214,632 + -1.5 2,214,632 + +1.6 2,214,632 + -1.5 2,214,632 + +0.3 2,214,632 + -0.7 2,214,632 + +2.6 2,214,632 + -1.3 2,214,632 + -0.4 2,214,632 + -2.3 2,214,632 + +1.0 2,214,652 + -1.5 2,214,652 + -2.0 2,214,652 + -0.4 2,214,652 + +1.6 2,214,652 + -0.7 2,214,652 + -0.4 2,214,652 + -0.2 2,214,652 + +1.0 2,214,652 + +0.6 2,214,652 + -0.3 2,214,652 + -0.8 2,214,662 + +1.6 2,214,662 + -1.1 2,214,662 + +0.9 2,214,662 + +2.8 2,214,662 + -0.2 2,214,662 + -1.1 2,214,662 + +1.6 2,214,662 + -0.7 2,214,662 + -0.2 2,214,662 + +0.6 2,214,662 + +1.0 2,214,662 + -1.2 2,214,662 + +0.3 2,214,662 + -2.3 2,214,662 + -0.7 2,214,662 + +0.3 2,214,662 + +0.8 2,214,662 + +0.6 2,214,662 + +0.6 2,214,662 + -1.3 2,214,662 + -1.3 2,214,698 + -1.7 2,214,746 + -1.5 2,214,760 + -0.7 2,214,810 + -0.2 2,214,810 + -0.2 2,214,810 + +0.0 2,214,810 + -0.2 2,214,810 + +1.0 2,214,810 + -1.2 2,214,820 + -1.2 2,214,829 + -0.5 2,214,829 + -1.7 2,214,829 + -2.3 2,214,834 + -0.8 2,214,834 + -2.0 2,214,834 + +1.3 2,214,834 + +0.0 2,214,834 + -1.3 2,214,834 + +0.5 2,214,834 + +0.6 2,214,834 + +2.6 2,214,834 + +1.0 2,214,834 + -0.3 2,214,834 + +0.0 2,214,834 + +0.6 2,214,834 + -1.3 2,214,850 + -1.7 2,214,851 + -1.3 2,214,851 + -0.8 2,214,851 + +1.0 2,214,851 + -1.2 2,214,851 + -0.7 2,214,851 + +2.5 2,214,851 + -0.5 2,214,851 + -0.7 2,214,851 + -0.8 2,214,851 + -1.8 2,214,851 + +0.3 2,214,851 + +0.4 2,214,851 + +0.0 2,214,851 + -1.5 2,214,851 + -0.4 2,214,851 + -0.4 2,214,851 + +0.4 2,214,851 + -0.5 2,214,851 + +1.0 2,214,851 + +0.6 2,214,851 + +0.1 2,214,851 + -0.8 2,214,896 + +0.3 2,214,901 + -2.1 2,215,676 - +1.0 2,215,725 + -1.6 2,215,730 + -1.5 2,215,735 + +1.0 2,215,766 + -0.2 2,215,766 + -1.0 2,215,766 + -0.8 2,215,766 + -0.8 2,215,778 + -2.3 2,215,778 + -2.1 2,215,778 + -1.9 2,215,778 + -1.0 2,215,778 + -1.8 2,215,778 + +2.4 2,215,778 + -0.2 2,215,778 + +1.7 2,215,778 + +0.1 2,215,778 + +0.3 2,215,778 + -1.0 2,215,778 + -1.7 2,215,778 + -2.6 2,215,778 + +2.9 2,215,779 + -1.5 2,215,794 + +0.3 2,215,802 + -1.4 2,215,802 + -0.8 2,215,805 + +1.0 2,215,811 + +0.3 2,215,813 + -0.4 2,215,813 + -1.1 2,215,813 + -1.3 2,215,813 + -1.9 2,215,813 + +1.0 2,215,813 + +0.0 2,215,813 + -0.0 2,215,813 + -1.0 2,215,813 + +1.5 2,215,813 + -2.6 2,215,813 + +1.3 2,215,813 + +2.8 2,215,813 + -0.4 2,215,813 + -0.4 2,215,813 + +0.8 2,215,813 + +1.0 2,215,813 + +1.9 2,215,813 + -2.7 2,215,813 + -0.2 2,215,813 + -2.0 2,215,813 + -1.0 2,215,813 + -0.7 2,215,813 + +1.0 2,215,813 + +0.3 2,215,813 + -1.8 2,215,813 + -0.8 2,215,813 + -0.9 2,215,813 + -1.1 2,215,813 + +4.2 2,215,813 + -0.5 2,215,813 + +0.3 2,215,813 + +1.2 2,215,813 + -1.1 2,215,813 + -0.4 2,215,813 + -1.1 2,215,813 + -1.5 2,215,813 + -2.1 2,215,813 + -0.4 2,215,813 + -0.8 2,215,813 + -2.7 2,215,813 + +2.4 2,215,813 + +2.0 2,215,813 + -1.7 2,215,813 + -1.9 2,215,813 + -0.8 2,215,813 + -0.9 2,215,813 + +0.9 2,215,813 + +1.5 2,215,813 + -0.2 2,215,813 + +1.0 2,215,813 + -0.5 2,215,813 + +1.0 2,215,818 + -0.4 2,215,823 + +0.8 2,215,823 + -1.5 2,215,823 + -1.9 2,215,823 + +2.0 2,215,823 + +1.4 2,215,823 + +1.6 2,215,823 + +3.3 2,215,823 + -1.5 2,215,823 + -1.3 2,215,823 + -0.3 2,215,823 + -0.5 2,215,823 + +0.5 2,215,824 + -2.0 2,215,835 + +1.7 2,215,835 + -1.0 2,215,841 + -1.6
Or see this region's nucleotide sequence