Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02126

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02125 and MPMX20_02126 are separated by 568 nucleotidesMPMX20_02126 and MPMX20_02127 are separated by 466 nucleotides MPMX20_02125: MPMX20_02125 - putative oxidoreductase, at 2,213,819 to 2,214,565 _02125 MPMX20_02126: MPMX20_02126 - hypothetical protein, at 2,215,134 to 2,215,586 _02126 MPMX20_02127: MPMX20_02127 - Aspartate-semialdehyde dehydrogenase, at 2,216,053 to 2,217,171 _02127 Position (kb) 2215 2216Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2214.152 kb on - strand, within MPMX20_02125at 2214.152 kb on - strand, within MPMX20_02125at 2214.154 kb on - strand, within MPMX20_02125at 2214.190 kb on - strand, within MPMX20_02125at 2214.190 kb on - strand, within MPMX20_02125at 2214.190 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.201 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.211 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.213 kb on - strand, within MPMX20_02125at 2214.220 kb on + strand, within MPMX20_02125at 2214.260 kb on - strand, within MPMX20_02125at 2214.265 kb on - strand, within MPMX20_02125at 2214.270 kb on - strand, within MPMX20_02125at 2214.270 kb on - strand, within MPMX20_02125at 2214.270 kb on - strand, within MPMX20_02125at 2214.270 kb on - strand, within MPMX20_02125at 2214.270 kb on - strand, within MPMX20_02125at 2214.315 kb on - strand, within MPMX20_02125at 2214.315 kb on - strand, within MPMX20_02125at 2214.315 kb on - strand, within MPMX20_02125at 2214.338 kb on - strand, within MPMX20_02125at 2214.396 kb on + strand, within MPMX20_02125at 2214.439 kb on + strand, within MPMX20_02125at 2214.447 kb on - strand, within MPMX20_02125at 2214.447 kb on - strand, within MPMX20_02125at 2214.458 kb on + strand, within MPMX20_02125at 2214.459 kb on + strand, within MPMX20_02125at 2214.459 kb on + strand, within MPMX20_02125at 2214.492 kb on + strandat 2214.499 kb on - strandat 2214.506 kb on + strandat 2214.535 kb on + strandat 2214.551 kb on + strandat 2214.592 kb on + strandat 2214.595 kb on + strandat 2214.595 kb on + strandat 2214.595 kb on + strandat 2214.595 kb on + strandat 2214.597 kb on + strandat 2214.603 kb on - strandat 2214.603 kb on - strandat 2214.603 kb on - strandat 2214.603 kb on - strandat 2214.605 kb on + strandat 2214.605 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.622 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.632 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.652 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.662 kb on + strandat 2214.698 kb on + strandat 2214.746 kb on + strandat 2214.760 kb on + strandat 2214.810 kb on + strandat 2214.810 kb on + strandat 2214.810 kb on + strandat 2214.810 kb on + strandat 2214.810 kb on + strandat 2214.810 kb on + strandat 2214.820 kb on + strandat 2214.829 kb on + strandat 2214.829 kb on + strandat 2214.829 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.834 kb on + strandat 2214.850 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.851 kb on + strandat 2214.896 kb on + strandat 2214.901 kb on + strandat 2215.676 kb on - strandat 2215.725 kb on + strandat 2215.730 kb on + strandat 2215.735 kb on + strandat 2215.766 kb on + strandat 2215.766 kb on + strandat 2215.766 kb on + strandat 2215.766 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.778 kb on + strandat 2215.779 kb on + strandat 2215.794 kb on + strandat 2215.802 kb on + strandat 2215.802 kb on + strandat 2215.805 kb on + strandat 2215.811 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.813 kb on + strandat 2215.818 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.823 kb on + strandat 2215.824 kb on + strandat 2215.835 kb on + strandat 2215.835 kb on + strandat 2215.841 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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2,214,152 - MPMX20_02125 0.45 -1.1
2,214,152 - MPMX20_02125 0.45 +1.0
2,214,154 - MPMX20_02125 0.45 +1.5
2,214,190 - MPMX20_02125 0.50 +0.3
2,214,190 - MPMX20_02125 0.50 -1.2
2,214,190 - MPMX20_02125 0.50 -2.7
2,214,201 - MPMX20_02125 0.51 +1.0
2,214,201 - MPMX20_02125 0.51 +2.2
2,214,201 - MPMX20_02125 0.51 -0.7
2,214,201 - MPMX20_02125 0.51 +0.3
2,214,201 - MPMX20_02125 0.51 +1.8
2,214,201 - MPMX20_02125 0.51 +0.3
2,214,211 - MPMX20_02125 0.52 +2.6
2,214,211 - MPMX20_02125 0.52 +0.6
2,214,211 - MPMX20_02125 0.52 -1.7
2,214,211 - MPMX20_02125 0.52 -1.4
2,214,211 - MPMX20_02125 0.52 -1.7
2,214,211 - MPMX20_02125 0.52 +1.0
2,214,211 - MPMX20_02125 0.52 +2.6
2,214,211 - MPMX20_02125 0.52 +1.6
2,214,211 - MPMX20_02125 0.52 +0.0
2,214,211 - MPMX20_02125 0.52 +4.2
2,214,211 - MPMX20_02125 0.52 -1.7
2,214,211 - MPMX20_02125 0.52 -1.0
2,214,213 - MPMX20_02125 0.53 -0.2
2,214,213 - MPMX20_02125 0.53 +1.7
2,214,213 - MPMX20_02125 0.53 +2.0
2,214,213 - MPMX20_02125 0.53 -0.8
2,214,213 - MPMX20_02125 0.53 -1.4
2,214,213 - MPMX20_02125 0.53 +1.6
2,214,213 - MPMX20_02125 0.53 -0.7
2,214,220 + MPMX20_02125 0.54 -1.1
2,214,260 - MPMX20_02125 0.59 -0.9
2,214,265 - MPMX20_02125 0.60 +1.0
2,214,270 - MPMX20_02125 0.60 +1.1
2,214,270 - MPMX20_02125 0.60 -0.2
2,214,270 - MPMX20_02125 0.60 +0.5
2,214,270 - MPMX20_02125 0.60 +1.6
2,214,270 - MPMX20_02125 0.60 +1.4
2,214,315 - MPMX20_02125 0.66 -0.5
2,214,315 - MPMX20_02125 0.66 +0.6
2,214,315 - MPMX20_02125 0.66 -2.4
2,214,338 - MPMX20_02125 0.69 +1.4
2,214,396 + MPMX20_02125 0.77 +0.6
2,214,439 + MPMX20_02125 0.83 +0.6
2,214,447 - MPMX20_02125 0.84 +2.4
2,214,447 - MPMX20_02125 0.84 +1.0
2,214,458 + MPMX20_02125 0.86 -2.1
2,214,459 + MPMX20_02125 0.86 -0.8
2,214,459 + MPMX20_02125 0.86 +1.8
2,214,492 + +0.0
2,214,499 - -1.5
2,214,506 + -1.2
2,214,535 + +0.3
2,214,551 + +0.6
2,214,592 + -1.0
2,214,595 + +1.2
2,214,595 + +3.0
2,214,595 + +1.9
2,214,595 + +2.4
2,214,597 + +1.6
2,214,603 - +0.0
2,214,603 - -1.2
2,214,603 - -0.5
2,214,603 - -0.2
2,214,605 + -1.0
2,214,605 + +1.6
2,214,622 + -1.5
2,214,622 + -1.5
2,214,622 + +0.6
2,214,622 + -0.7
2,214,622 + +1.0
2,214,622 + -0.2
2,214,622 + +0.0
2,214,622 + +0.0
2,214,622 + +1.5
2,214,632 + +0.5
2,214,632 + -1.2
2,214,632 + -1.2
2,214,632 + -1.1
2,214,632 + +0.0
2,214,632 + +1.6
2,214,632 + -0.4
2,214,632 + -0.5
2,214,632 + -0.5
2,214,632 + -1.1
2,214,632 + +2.6
2,214,632 + -0.5
2,214,632 + +0.6
2,214,632 + +3.3
2,214,632 + -0.8
2,214,632 + -0.2
2,214,632 + +0.3
2,214,632 + -2.3
2,214,632 + -1.4
2,214,632 + -1.5
2,214,632 + +1.6
2,214,632 + -1.5
2,214,632 + +0.3
2,214,632 + -0.7
2,214,632 + +2.6
2,214,632 + -1.3
2,214,632 + -0.4
2,214,632 + -2.3
2,214,632 + +1.0
2,214,652 + -1.5
2,214,652 + -2.0
2,214,652 + -0.4
2,214,652 + +1.6
2,214,652 + -0.7
2,214,652 + -0.4
2,214,652 + -0.2
2,214,652 + +1.0
2,214,652 + +0.6
2,214,652 + -0.3
2,214,652 + -0.8
2,214,662 + +1.6
2,214,662 + -1.1
2,214,662 + +0.9
2,214,662 + +2.8
2,214,662 + -0.2
2,214,662 + -1.1
2,214,662 + +1.6
2,214,662 + -0.7
2,214,662 + -0.2
2,214,662 + +0.6
2,214,662 + +1.0
2,214,662 + -1.2
2,214,662 + +0.3
2,214,662 + -2.3
2,214,662 + -0.7
2,214,662 + +0.3
2,214,662 + +0.8
2,214,662 + +0.6
2,214,662 + +0.6
2,214,662 + -1.3
2,214,662 + -1.3
2,214,698 + -1.7
2,214,746 + -1.5
2,214,760 + -0.7
2,214,810 + -0.2
2,214,810 + -0.2
2,214,810 + +0.0
2,214,810 + -0.2
2,214,810 + +1.0
2,214,810 + -1.2
2,214,820 + -1.2
2,214,829 + -0.5
2,214,829 + -1.7
2,214,829 + -2.3
2,214,834 + -0.8
2,214,834 + -2.0
2,214,834 + +1.3
2,214,834 + +0.0
2,214,834 + -1.3
2,214,834 + +0.5
2,214,834 + +0.6
2,214,834 + +2.6
2,214,834 + +1.0
2,214,834 + -0.3
2,214,834 + +0.0
2,214,834 + +0.6
2,214,834 + -1.3
2,214,850 + -1.7
2,214,851 + -1.3
2,214,851 + -0.8
2,214,851 + +1.0
2,214,851 + -1.2
2,214,851 + -0.7
2,214,851 + +2.5
2,214,851 + -0.5
2,214,851 + -0.7
2,214,851 + -0.8
2,214,851 + -1.8
2,214,851 + +0.3
2,214,851 + +0.4
2,214,851 + +0.0
2,214,851 + -1.5
2,214,851 + -0.4
2,214,851 + -0.4
2,214,851 + +0.4
2,214,851 + -0.5
2,214,851 + +1.0
2,214,851 + +0.6
2,214,851 + +0.1
2,214,851 + -0.8
2,214,896 + +0.3
2,214,901 + -2.1
2,215,676 - +1.0
2,215,725 + -1.6
2,215,730 + -1.5
2,215,735 + +1.0
2,215,766 + -0.2
2,215,766 + -1.0
2,215,766 + -0.8
2,215,766 + -0.8
2,215,778 + -2.3
2,215,778 + -2.1
2,215,778 + -1.9
2,215,778 + -1.0
2,215,778 + -1.8
2,215,778 + +2.4
2,215,778 + -0.2
2,215,778 + +1.7
2,215,778 + +0.1
2,215,778 + +0.3
2,215,778 + -1.0
2,215,778 + -1.7
2,215,778 + -2.6
2,215,778 + +2.9
2,215,779 + -1.5
2,215,794 + +0.3
2,215,802 + -1.4
2,215,802 + -0.8
2,215,805 + +1.0
2,215,811 + +0.3
2,215,813 + -0.4
2,215,813 + -1.1
2,215,813 + -1.3
2,215,813 + -1.9
2,215,813 + +1.0
2,215,813 + +0.0
2,215,813 + -0.0
2,215,813 + -1.0
2,215,813 + +1.5
2,215,813 + -2.6
2,215,813 + +1.3
2,215,813 + +2.8
2,215,813 + -0.4
2,215,813 + -0.4
2,215,813 + +0.8
2,215,813 + +1.0
2,215,813 + +1.9
2,215,813 + -2.7
2,215,813 + -0.2
2,215,813 + -2.0
2,215,813 + -1.0
2,215,813 + -0.7
2,215,813 + +1.0
2,215,813 + +0.3
2,215,813 + -1.8
2,215,813 + -0.8
2,215,813 + -0.9
2,215,813 + -1.1
2,215,813 + +4.2
2,215,813 + -0.5
2,215,813 + +0.3
2,215,813 + +1.2
2,215,813 + -1.1
2,215,813 + -0.4
2,215,813 + -1.1
2,215,813 + -1.5
2,215,813 + -2.1
2,215,813 + -0.4
2,215,813 + -0.8
2,215,813 + -2.7
2,215,813 + +2.4
2,215,813 + +2.0
2,215,813 + -1.7
2,215,813 + -1.9
2,215,813 + -0.8
2,215,813 + -0.9
2,215,813 + +0.9
2,215,813 + +1.5
2,215,813 + -0.2
2,215,813 + +1.0
2,215,813 + -0.5
2,215,813 + +1.0
2,215,818 + -0.4
2,215,823 + +0.8
2,215,823 + -1.5
2,215,823 + -1.9
2,215,823 + +2.0
2,215,823 + +1.4
2,215,823 + +1.6
2,215,823 + +3.3
2,215,823 + -1.5
2,215,823 + -1.3
2,215,823 + -0.3
2,215,823 + -0.5
2,215,823 + +0.5
2,215,824 + -2.0
2,215,835 + +1.7
2,215,835 + -1.0
2,215,841 + -1.6

Or see this region's nucleotide sequence