Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01307

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01306 and MPMX20_01307 are separated by 331 nucleotidesMPMX20_01307 and MPMX20_01308 are separated by 5 nucleotidesMPMX20_01308 and MPMX20_01309 are separated by 89 nucleotides MPMX20_01306: MPMX20_01306 - Glutamate/aspartate import solute-binding protein, at 1,366,911 to 1,367,816 _01306 MPMX20_01307: MPMX20_01307 - Apolipoprotein N-acyltransferase, at 1,368,148 to 1,369,686 _01307 MPMX20_01308: MPMX20_01308 - Magnesium and cobalt efflux protein CorC, at 1,369,692 to 1,370,570 _01308 MPMX20_01309: MPMX20_01309 - Endoribonuclease YbeY, at 1,370,660 to 1,371,127 _01309 Position (kb) 1368 1369 1370Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1367.150 kb on - strand, within MPMX20_01306at 1367.470 kb on - strand, within MPMX20_01306at 1367.564 kb on + strand, within MPMX20_01306at 1367.593 kb on + strand, within MPMX20_01306at 1367.593 kb on + strand, within MPMX20_01306at 1367.593 kb on + strand, within MPMX20_01306at 1367.611 kb on + strand, within MPMX20_01306at 1367.618 kb on + strand, within MPMX20_01306at 1367.619 kb on - strand, within MPMX20_01306at 1367.666 kb on + strand, within MPMX20_01306at 1367.717 kb on + strand, within MPMX20_01306at 1367.725 kb on - strand, within MPMX20_01306at 1367.730 kb on - strandat 1367.892 kb on + strandat 1367.892 kb on + strandat 1367.900 kb on - strandat 1367.917 kb on + strandat 1367.925 kb on - strandat 1368.013 kb on + strandat 1368.038 kb on - strandat 1368.115 kb on - strandat 1368.172 kb on + strandat 1368.172 kb on + strandat 1368.172 kb on + strandat 1368.172 kb on + strandat 1368.177 kb on + strandat 1368.180 kb on - strandat 1368.180 kb on - strandat 1368.180 kb on - strandat 1368.180 kb on - strandat 1368.180 kb on - strandat 1368.188 kb on + strandat 1369.698 kb on - strandat 1369.789 kb on + strand, within MPMX20_01308at 1369.804 kb on + strand, within MPMX20_01308at 1369.920 kb on - strand, within MPMX20_01308at 1369.932 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.939 kb on - strand, within MPMX20_01308at 1369.941 kb on - strand, within MPMX20_01308at 1369.941 kb on - strand, within MPMX20_01308at 1369.960 kb on - strand, within MPMX20_01308at 1370.120 kb on + strand, within MPMX20_01308at 1370.140 kb on + strand, within MPMX20_01308at 1370.169 kb on + strand, within MPMX20_01308at 1370.311 kb on - strand, within MPMX20_01308at 1370.321 kb on + strand, within MPMX20_01308at 1370.392 kb on - strand, within MPMX20_01308at 1370.400 kb on - strand, within MPMX20_01308at 1370.540 kb on + strandat 1370.577 kb on + strandat 1370.605 kb on - strandat 1370.627 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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1,367,150 - MPMX20_01306 0.26 -0.7
1,367,470 - MPMX20_01306 0.62 -3.0
1,367,564 + MPMX20_01306 0.72 +1.7
1,367,593 + MPMX20_01306 0.75 -0.4
1,367,593 + MPMX20_01306 0.75 -0.5
1,367,593 + MPMX20_01306 0.75 +0.5
1,367,611 + MPMX20_01306 0.77 -2.2
1,367,618 + MPMX20_01306 0.78 +1.0
1,367,619 - MPMX20_01306 0.78 -1.3
1,367,666 + MPMX20_01306 0.83 -1.1
1,367,717 + MPMX20_01306 0.89 -1.2
1,367,725 - MPMX20_01306 0.90 -3.0
1,367,730 - +0.3
1,367,892 + -3.4
1,367,892 + +0.2
1,367,900 - -0.5
1,367,917 + -0.1
1,367,925 - +0.7
1,368,013 + -0.5
1,368,038 - -2.9
1,368,115 - -1.1
1,368,172 + -3.0
1,368,172 + +0.5
1,368,172 + +0.5
1,368,172 + -0.6
1,368,177 + -0.4
1,368,180 - -1.8
1,368,180 - -1.4
1,368,180 - -0.2
1,368,180 - -2.2
1,368,180 - +0.2
1,368,188 + -0.2
1,369,698 - -0.7
1,369,789 + MPMX20_01308 0.11 +2.3
1,369,804 + MPMX20_01308 0.13 +0.9
1,369,920 - MPMX20_01308 0.26 -0.9
1,369,932 + MPMX20_01308 0.27 +0.2
1,369,933 + MPMX20_01308 0.27 +0.2
1,369,933 + MPMX20_01308 0.27 -0.1
1,369,933 + MPMX20_01308 0.27 -1.7
1,369,933 + MPMX20_01308 0.27 -1.7
1,369,933 + MPMX20_01308 0.27 +0.8
1,369,933 + MPMX20_01308 0.27 -1.3
1,369,933 + MPMX20_01308 0.27 +0.2
1,369,933 + MPMX20_01308 0.27 -0.3
1,369,939 - MPMX20_01308 0.28 +2.2
1,369,941 - MPMX20_01308 0.28 +0.6
1,369,941 - MPMX20_01308 0.28 +0.3
1,369,960 - MPMX20_01308 0.30 +4.5
1,370,120 + MPMX20_01308 0.49 -0.2
1,370,140 + MPMX20_01308 0.51 +0.5
1,370,169 + MPMX20_01308 0.54 -1.0
1,370,311 - MPMX20_01308 0.70 -0.2
1,370,321 + MPMX20_01308 0.72 -1.6
1,370,392 - MPMX20_01308 0.80 -0.8
1,370,400 - MPMX20_01308 0.81 +0.5
1,370,540 + -2.7
1,370,577 + +0.9
1,370,605 - -1.2
1,370,627 - -0.2

Or see this region's nucleotide sequence