Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01275

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01274 and MPMX20_01275 are separated by 9 nucleotidesMPMX20_01275 and MPMX20_01276 are separated by 137 nucleotidesMPMX20_01276 and MPMX20_01277 are separated by 254 nucleotides MPMX20_01274: MPMX20_01274 - putative zinc-binding alcohol dehydrogenase, at 1,338,484 to 1,339,722 _01274 MPMX20_01275: MPMX20_01275 - hypothetical protein, at 1,339,732 to 1,339,821 _01275 MPMX20_01276: MPMX20_01276 - Regulator of nucleoside diphosphate kinase, at 1,339,959 to 1,340,369 _01276 MPMX20_01277: MPMX20_01277 - Non-heme chloroperoxidase, at 1,340,624 to 1,341,454 _01277 Position (kb) 1339 1340Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 1338.736 kb on - strand, within MPMX20_01274at 1338.806 kb on + strand, within MPMX20_01274at 1338.806 kb on + strand, within MPMX20_01274at 1338.809 kb on - strand, within MPMX20_01274at 1338.814 kb on - strand, within MPMX20_01274at 1338.819 kb on - strand, within MPMX20_01274at 1338.865 kb on + strand, within MPMX20_01274at 1338.874 kb on - strand, within MPMX20_01274at 1338.874 kb on - strand, within MPMX20_01274at 1338.915 kb on - strand, within MPMX20_01274at 1338.932 kb on + strand, within MPMX20_01274at 1338.935 kb on - strand, within MPMX20_01274at 1338.940 kb on - strand, within MPMX20_01274at 1338.940 kb on - strand, within MPMX20_01274at 1338.942 kb on + strand, within MPMX20_01274at 1338.950 kb on - strand, within MPMX20_01274at 1338.984 kb on - strand, within MPMX20_01274at 1338.989 kb on - strand, within MPMX20_01274at 1339.062 kb on - strand, within MPMX20_01274at 1339.117 kb on + strand, within MPMX20_01274at 1339.125 kb on - strand, within MPMX20_01274at 1339.125 kb on - strand, within MPMX20_01274at 1339.167 kb on + strand, within MPMX20_01274at 1339.193 kb on + strand, within MPMX20_01274at 1339.246 kb on - strand, within MPMX20_01274at 1339.248 kb on + strand, within MPMX20_01274at 1339.256 kb on - strand, within MPMX20_01274at 1339.346 kb on - strand, within MPMX20_01274at 1339.400 kb on + strand, within MPMX20_01274at 1339.551 kb on + strand, within MPMX20_01274at 1339.687 kb on + strandat 1339.687 kb on + strandat 1339.692 kb on + strandat 1339.692 kb on + strandat 1339.695 kb on - strandat 1339.748 kb on + strand, within MPMX20_01275at 1339.756 kb on - strand, within MPMX20_01275at 1339.756 kb on - strand, within MPMX20_01275at 1339.806 kb on + strand, within MPMX20_01275at 1339.814 kb on - strandat 1339.844 kb on - strandat 1339.854 kb on - strandat 1339.854 kb on - strandat 1339.854 kb on - strandat 1339.858 kb on + strandat 1339.858 kb on + strandat 1339.866 kb on - strandat 1339.877 kb on + strandat 1339.924 kb on - strandat 1339.931 kb on - strandat 1339.931 kb on - strandat 1339.936 kb on - strandat 1339.965 kb on - strandat 1340.054 kb on - strand, within MPMX20_01276at 1340.101 kb on + strand, within MPMX20_01276at 1340.109 kb on - strand, within MPMX20_01276at 1340.137 kb on + strand, within MPMX20_01276at 1340.137 kb on + strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.162 kb on + strand, within MPMX20_01276at 1340.167 kb on - strand, within MPMX20_01276at 1340.167 kb on - strand, within MPMX20_01276at 1340.170 kb on - strand, within MPMX20_01276at 1340.213 kb on + strand, within MPMX20_01276at 1340.226 kb on + strand, within MPMX20_01276at 1340.228 kb on + strand, within MPMX20_01276at 1340.241 kb on + strand, within MPMX20_01276at 1340.244 kb on - strand, within MPMX20_01276at 1340.244 kb on - strand, within MPMX20_01276at 1340.292 kb on + strand, within MPMX20_01276at 1340.327 kb on - strand, within MPMX20_01276at 1340.384 kb on + strandat 1340.392 kb on - strandat 1340.446 kb on + strandat 1340.446 kb on + strandat 1340.464 kb on + strandat 1340.464 kb on - strandat 1340.472 kb on - strandat 1340.476 kb on + strandat 1340.483 kb on + strandat 1340.491 kb on - strandat 1340.581 kb on + strandat 1340.610 kb on - strandat 1340.618 kb on + strandat 1340.702 kb on + strandat 1340.704 kb on - strandat 1340.716 kb on - strand, within MPMX20_01277at 1340.802 kb on + strand, within MPMX20_01277at 1340.802 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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1,338,736 - MPMX20_01274 0.20 -0.1
1,338,806 + MPMX20_01274 0.26 -1.9
1,338,806 + MPMX20_01274 0.26 -0.1
1,338,809 - MPMX20_01274 0.26 -0.1
1,338,814 - MPMX20_01274 0.27 -0.7
1,338,819 - MPMX20_01274 0.27 -0.7
1,338,865 + MPMX20_01274 0.31 -0.3
1,338,874 - MPMX20_01274 0.31 -0.5
1,338,874 - MPMX20_01274 0.31 -2.3
1,338,915 - MPMX20_01274 0.35 +0.1
1,338,932 + MPMX20_01274 0.36 +1.8
1,338,935 - MPMX20_01274 0.36 -2.5
1,338,940 - MPMX20_01274 0.37 +0.7
1,338,940 - MPMX20_01274 0.37 -1.1
1,338,942 + MPMX20_01274 0.37 -0.5
1,338,950 - MPMX20_01274 0.38 -0.7
1,338,984 - MPMX20_01274 0.40 -2.8
1,338,989 - MPMX20_01274 0.41 +0.1
1,339,062 - MPMX20_01274 0.47 -0.8
1,339,117 + MPMX20_01274 0.51 +1.0
1,339,125 - MPMX20_01274 0.52 -2.0
1,339,125 - MPMX20_01274 0.52 -3.2
1,339,167 + MPMX20_01274 0.55 -2.5
1,339,193 + MPMX20_01274 0.57 -3.2
1,339,246 - MPMX20_01274 0.62 -2.3
1,339,248 + MPMX20_01274 0.62 -2.3
1,339,256 - MPMX20_01274 0.62 +0.5
1,339,346 - MPMX20_01274 0.70 -0.1
1,339,400 + MPMX20_01274 0.74 -4.6
1,339,551 + MPMX20_01274 0.86 +0.7
1,339,687 + +5.0
1,339,687 + +0.1
1,339,692 + +0.4
1,339,692 + -0.5
1,339,695 - -2.0
1,339,748 + MPMX20_01275 0.18 -0.7
1,339,756 - MPMX20_01275 0.27 -1.2
1,339,756 - MPMX20_01275 0.27 -0.1
1,339,806 + MPMX20_01275 0.82 -1.1
1,339,814 - -1.6
1,339,844 - -0.3
1,339,854 - +1.9
1,339,854 - +2.5
1,339,854 - -0.5
1,339,858 + +0.5
1,339,858 + +1.6
1,339,866 - -0.1
1,339,877 + +0.3
1,339,924 - -2.1
1,339,931 - -1.7
1,339,931 - +1.0
1,339,936 - -1.7
1,339,965 - +0.3
1,340,054 - MPMX20_01276 0.23 -0.2
1,340,101 + MPMX20_01276 0.35 -0.5
1,340,109 - MPMX20_01276 0.36 -0.7
1,340,137 + MPMX20_01276 0.43 +0.2
1,340,137 + MPMX20_01276 0.43 -2.6
1,340,145 - MPMX20_01276 0.45 +1.3
1,340,145 - MPMX20_01276 0.45 +0.2
1,340,145 - MPMX20_01276 0.45 +0.5
1,340,162 + MPMX20_01276 0.49 +0.2
1,340,167 - MPMX20_01276 0.51 +0.5
1,340,167 - MPMX20_01276 0.51 +1.3
1,340,170 - MPMX20_01276 0.51 +0.9
1,340,213 + MPMX20_01276 0.62 -1.3
1,340,226 + MPMX20_01276 0.65 -1.5
1,340,228 + MPMX20_01276 0.65 -2.1
1,340,241 + MPMX20_01276 0.69 +0.8
1,340,244 - MPMX20_01276 0.69 -3.8
1,340,244 - MPMX20_01276 0.69 +0.3
1,340,292 + MPMX20_01276 0.81 -1.2
1,340,327 - MPMX20_01276 0.90 -2.1
1,340,384 + -1.1
1,340,392 - +0.7
1,340,446 + +3.1
1,340,446 + -0.4
1,340,464 + -2.7
1,340,464 - -3.5
1,340,472 - -1.3
1,340,476 + +0.9
1,340,483 + +0.5
1,340,491 - -0.3
1,340,581 + -0.3
1,340,610 - +0.9
1,340,618 + -1.0
1,340,702 + -0.4
1,340,704 - +0.8
1,340,716 - MPMX20_01277 0.11 -2.8
1,340,802 + MPMX20_01277 0.21 +0.2
1,340,802 + MPMX20_01277 0.21 -1.3
1,340,821 + MPMX20_01277 0.24 -1.1
1,340,821 + MPMX20_01277 0.24 -3.0
1,340,821 + MPMX20_01277 0.24 -0.1

Or see this region's nucleotide sequence