Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00698

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00697 and MPMX20_00698 are separated by 67 nucleotidesMPMX20_00698 and MPMX20_00699 are separated by 227 nucleotides MPMX20_00697: MPMX20_00697 - HTH-type transcriptional regulator PgrR, at 717,225 to 718,124 _00697 MPMX20_00698: MPMX20_00698 - Energy-dependent translational throttle protein EttA, at 718,192 to 719,859 _00698 MPMX20_00699: MPMX20_00699 - Soluble lytic murein transglycosylase, at 720,087 to 722,024 _00699 Position (kb) 718 719 720Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 717.242 kb on + strandat 717.262 kb on - strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.265 kb on + strandat 717.273 kb on - strandat 717.273 kb on - strandat 717.357 kb on + strand, within MPMX20_00697at 717.365 kb on - strand, within MPMX20_00697at 717.391 kb on + strand, within MPMX20_00697at 717.391 kb on + strand, within MPMX20_00697at 717.494 kb on + strand, within MPMX20_00697at 717.494 kb on + strand, within MPMX20_00697at 717.517 kb on - strand, within MPMX20_00697at 717.566 kb on + strand, within MPMX20_00697at 717.588 kb on - strand, within MPMX20_00697at 717.647 kb on - strand, within MPMX20_00697at 717.661 kb on + strand, within MPMX20_00697at 717.711 kb on - strand, within MPMX20_00697at 717.742 kb on - strand, within MPMX20_00697at 717.742 kb on - strand, within MPMX20_00697at 717.801 kb on - strand, within MPMX20_00697at 717.811 kb on + strand, within MPMX20_00697at 717.811 kb on + strand, within MPMX20_00697at 717.816 kb on + strand, within MPMX20_00697at 717.855 kb on - strand, within MPMX20_00697at 717.855 kb on - strand, within MPMX20_00697at 717.868 kb on - strand, within MPMX20_00697at 717.877 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.977 kb on + strand, within MPMX20_00697at 717.985 kb on - strand, within MPMX20_00697at 718.025 kb on + strand, within MPMX20_00697at 718.033 kb on - strand, within MPMX20_00697at 718.090 kb on + strandat 718.120 kb on + strandat 718.136 kb on + strandat 718.142 kb on + strandat 718.213 kb on - strandat 718.235 kb on - strandat 718.244 kb on - strandat 718.382 kb on - strand, within MPMX20_00698at 718.430 kb on - strand, within MPMX20_00698at 718.432 kb on - strand, within MPMX20_00698at 718.517 kb on + strand, within MPMX20_00698at 718.538 kb on + strand, within MPMX20_00698at 718.538 kb on + strand, within MPMX20_00698at 718.538 kb on + strand, within MPMX20_00698at 718.538 kb on + strand, within MPMX20_00698at 718.538 kb on + strand, within MPMX20_00698at 718.546 kb on - strand, within MPMX20_00698at 718.548 kb on + strand, within MPMX20_00698at 718.629 kb on - strand, within MPMX20_00698at 718.652 kb on + strand, within MPMX20_00698at 718.658 kb on - strand, within MPMX20_00698at 718.660 kb on - strand, within MPMX20_00698at 718.660 kb on - strand, within MPMX20_00698at 718.730 kb on + strand, within MPMX20_00698at 718.786 kb on + strand, within MPMX20_00698at 718.826 kb on + strand, within MPMX20_00698at 718.834 kb on - strand, within MPMX20_00698at 718.859 kb on + strand, within MPMX20_00698at 718.867 kb on - strand, within MPMX20_00698at 718.867 kb on - strand, within MPMX20_00698at 718.883 kb on - strand, within MPMX20_00698at 718.908 kb on - strand, within MPMX20_00698at 718.924 kb on + strand, within MPMX20_00698at 718.964 kb on - strand, within MPMX20_00698at 718.993 kb on + strand, within MPMX20_00698at 719.001 kb on - strand, within MPMX20_00698at 719.076 kb on + strand, within MPMX20_00698at 719.201 kb on + strand, within MPMX20_00698at 719.302 kb on + strand, within MPMX20_00698at 719.303 kb on + strand, within MPMX20_00698at 719.339 kb on - strand, within MPMX20_00698at 719.374 kb on - strand, within MPMX20_00698at 719.418 kb on - strand, within MPMX20_00698at 719.539 kb on + strand, within MPMX20_00698at 719.594 kb on - strand, within MPMX20_00698at 719.598 kb on + strand, within MPMX20_00698at 719.606 kb on - strand, within MPMX20_00698at 719.859 kb on + strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.866 kb on - strandat 719.882 kb on - strandat 719.982 kb on - strandat 720.043 kb on + strandat 720.167 kb on - strandat 720.230 kb on + strandat 720.230 kb on + strandat 720.230 kb on + strandat 720.236 kb on - strandat 720.267 kb on - strandat 720.283 kb on - strand, within MPMX20_00699at 720.361 kb on + strand, within MPMX20_00699at 720.438 kb on - strand, within MPMX20_00699at 720.438 kb on - strand, within MPMX20_00699at 720.485 kb on - strand, within MPMX20_00699at 720.527 kb on + strand, within MPMX20_00699at 720.546 kb on + strand, within MPMX20_00699at 720.638 kb on + strand, within MPMX20_00699at 720.704 kb on + strand, within MPMX20_00699at 720.768 kb on + strand, within MPMX20_00699at 720.768 kb on + strand, within MPMX20_00699at 720.775 kb on + strand, within MPMX20_00699at 720.776 kb on - strand, within MPMX20_00699at 720.776 kb on - strand, within MPMX20_00699

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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717,242 + -0.7
717,262 - -0.5
717,265 + +2.5
717,265 + -0.1
717,265 + +1.1
717,265 + +0.9
717,265 + +1.0
717,273 - +1.5
717,273 - +0.4
717,357 + MPMX20_00697 0.15 +1.0
717,365 - MPMX20_00697 0.16 +1.8
717,391 + MPMX20_00697 0.18 +1.8
717,391 + MPMX20_00697 0.18 -2.6
717,494 + MPMX20_00697 0.30 +1.1
717,494 + MPMX20_00697 0.30 +0.9
717,517 - MPMX20_00697 0.32 -1.6
717,566 + MPMX20_00697 0.38 +0.5
717,588 - MPMX20_00697 0.40 +0.9
717,647 - MPMX20_00697 0.47 +0.7
717,661 + MPMX20_00697 0.48 +2.5
717,711 - MPMX20_00697 0.54 +0.5
717,742 - MPMX20_00697 0.57 +0.8
717,742 - MPMX20_00697 0.57 -0.1
717,801 - MPMX20_00697 0.64 -0.8
717,811 + MPMX20_00697 0.65 -0.8
717,811 + MPMX20_00697 0.65 +0.5
717,816 + MPMX20_00697 0.66 +0.7
717,855 - MPMX20_00697 0.70 +0.7
717,855 - MPMX20_00697 0.70 -1.6
717,868 - MPMX20_00697 0.71 -3.2
717,877 + MPMX20_00697 0.72 +0.9
717,977 + MPMX20_00697 0.84 -0.4
717,977 + MPMX20_00697 0.84 -0.1
717,977 + MPMX20_00697 0.84 -0.5
717,985 - MPMX20_00697 0.84 -1.8
718,025 + MPMX20_00697 0.89 -0.6
718,033 - MPMX20_00697 0.90 +0.1
718,090 + +0.7
718,120 + -0.8
718,136 + -2.0
718,142 + +3.0
718,213 - -2.1
718,235 - -0.1
718,244 - +0.7
718,382 - MPMX20_00698 0.11 -0.2
718,430 - MPMX20_00698 0.14 -1.8
718,432 - MPMX20_00698 0.14 -1.7
718,517 + MPMX20_00698 0.19 -2.8
718,538 + MPMX20_00698 0.21 +4.8
718,538 + MPMX20_00698 0.21 +1.3
718,538 + MPMX20_00698 0.21 -0.3
718,538 + MPMX20_00698 0.21 +0.4
718,538 + MPMX20_00698 0.21 +2.5
718,546 - MPMX20_00698 0.21 -2.8
718,548 + MPMX20_00698 0.21 -1.0
718,629 - MPMX20_00698 0.26 -0.8
718,652 + MPMX20_00698 0.28 -1.3
718,658 - MPMX20_00698 0.28 +2.9
718,660 - MPMX20_00698 0.28 +0.3
718,660 - MPMX20_00698 0.28 +1.2
718,730 + MPMX20_00698 0.32 +0.4
718,786 + MPMX20_00698 0.36 +2.7
718,826 + MPMX20_00698 0.38 +1.1
718,834 - MPMX20_00698 0.38 -1.2
718,859 + MPMX20_00698 0.40 +0.2
718,867 - MPMX20_00698 0.40 +0.6
718,867 - MPMX20_00698 0.40 +1.5
718,883 - MPMX20_00698 0.41 -3.2
718,908 - MPMX20_00698 0.43 +1.9
718,924 + MPMX20_00698 0.44 -1.3
718,964 - MPMX20_00698 0.46 -0.2
718,993 + MPMX20_00698 0.48 +1.0
719,001 - MPMX20_00698 0.49 -0.4
719,076 + MPMX20_00698 0.53 +0.4
719,201 + MPMX20_00698 0.60 +0.7
719,302 + MPMX20_00698 0.67 -2.6
719,303 + MPMX20_00698 0.67 -1.5
719,339 - MPMX20_00698 0.69 -1.6
719,374 - MPMX20_00698 0.71 -0.0
719,418 - MPMX20_00698 0.74 -1.2
719,539 + MPMX20_00698 0.81 +2.1
719,594 - MPMX20_00698 0.84 -0.5
719,598 + MPMX20_00698 0.84 -0.1
719,606 - MPMX20_00698 0.85 +0.8
719,859 + -1.4
719,866 - +0.1
719,866 - -0.1
719,866 - -0.4
719,866 - -2.3
719,882 - -0.1
719,982 - +1.1
720,043 + +3.2
720,167 - -1.2
720,230 + +1.4
720,230 + -2.2
720,230 + -1.1
720,236 - +0.2
720,267 - -1.0
720,283 - MPMX20_00699 0.10 -4.4
720,361 + MPMX20_00699 0.14 -3.1
720,438 - MPMX20_00699 0.18 -2.3
720,438 - MPMX20_00699 0.18 +0.0
720,485 - MPMX20_00699 0.21 +1.2
720,527 + MPMX20_00699 0.23 -0.7
720,546 + MPMX20_00699 0.24 +0.2
720,638 + MPMX20_00699 0.28 -1.4
720,704 + MPMX20_00699 0.32 -0.3
720,768 + MPMX20_00699 0.35 +2.7
720,768 + MPMX20_00699 0.35 -1.0
720,775 + MPMX20_00699 0.36 +2.3
720,776 - MPMX20_00699 0.36 +0.0
720,776 - MPMX20_00699 0.36 +0.1

Or see this region's nucleotide sequence