Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00507

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00505 and MPMX20_00506 are separated by 42 nucleotidesMPMX20_00506 and MPMX20_00507 are separated by 481 nucleotidesMPMX20_00507 and MPMX20_00508 are separated by 309 nucleotides MPMX20_00505: MPMX20_00505 - Gamma-glutamylcyclotransferase family protein ytfP, at 523,014 to 523,358 _00505 MPMX20_00506: MPMX20_00506 - hypothetical protein, at 523,401 to 523,724 _00506 MPMX20_00507: MPMX20_00507 - Inorganic pyrophosphatase, at 524,206 to 524,736 _00507 MPMX20_00508: MPMX20_00508 - ABC transporter periplasmic-binding protein YtfQ, at 525,046 to 526,002 _00508 Position (kb) 524 525Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 523.263 kb on + strand, within MPMX20_00505at 523.265 kb on + strand, within MPMX20_00505at 523.273 kb on - strand, within MPMX20_00505at 523.273 kb on - strand, within MPMX20_00505at 523.273 kb on - strand, within MPMX20_00505at 523.273 kb on - strand, within MPMX20_00505at 523.341 kb on + strandat 523.404 kb on + strandat 523.409 kb on + strandat 523.409 kb on + strandat 523.412 kb on - strandat 523.417 kb on - strandat 523.417 kb on - strandat 523.417 kb on - strandat 523.429 kb on + strandat 523.466 kb on - strand, within MPMX20_00506at 523.477 kb on + strand, within MPMX20_00506at 523.477 kb on + strand, within MPMX20_00506at 523.477 kb on + strand, within MPMX20_00506at 523.481 kb on + strand, within MPMX20_00506at 523.516 kb on - strand, within MPMX20_00506at 523.516 kb on - strand, within MPMX20_00506at 523.642 kb on - strand, within MPMX20_00506at 523.678 kb on - strand, within MPMX20_00506at 523.679 kb on + strand, within MPMX20_00506at 523.679 kb on + strand, within MPMX20_00506at 523.679 kb on + strand, within MPMX20_00506at 523.679 kb on + strand, within MPMX20_00506at 523.679 kb on + strand, within MPMX20_00506at 523.679 kb on - strand, within MPMX20_00506at 523.679 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.687 kb on - strand, within MPMX20_00506at 523.694 kb on + strandat 523.694 kb on + strandat 523.694 kb on + strandat 523.694 kb on + strandat 523.694 kb on + strandat 523.701 kb on + strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.702 kb on - strandat 523.709 kb on - strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.747 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.752 kb on + strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.755 kb on - strandat 523.757 kb on + strandat 523.757 kb on + strandat 523.757 kb on + strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.760 kb on - strandat 523.806 kb on + strandat 523.806 kb on + strandat 523.808 kb on + strandat 523.812 kb on + strandat 523.812 kb on + strandat 523.814 kb on - strandat 523.816 kb on - strandat 523.818 kb on + strandat 523.818 kb on + strandat 523.821 kb on - strandat 523.821 kb on - strandat 523.826 kb on - strandat 523.826 kb on - strandat 523.826 kb on - strandat 523.839 kb on - strandat 523.839 kb on - strandat 523.841 kb on - strandat 523.864 kb on + strandat 523.864 kb on + strandat 523.869 kb on + strandat 523.869 kb on + strandat 523.869 kb on + strandat 523.869 kb on + strandat 523.885 kb on + strandat 523.885 kb on + strandat 523.886 kb on + strandat 523.893 kb on - strandat 523.944 kb on + strandat 523.944 kb on + strandat 523.944 kb on + strandat 523.945 kb on + strandat 523.945 kb on + strandat 523.952 kb on - strandat 523.953 kb on - strandat 523.966 kb on + strandat 523.985 kb on - strandat 524.003 kb on - strandat 524.007 kb on + strandat 524.013 kb on - strandat 524.025 kb on + strandat 524.026 kb on + strandat 524.033 kb on - strandat 524.035 kb on + strandat 524.044 kb on + strandat 524.044 kb on + strandat 524.052 kb on - strandat 524.052 kb on - strandat 524.057 kb on - strandat 524.057 kb on - strandat 524.059 kb on + strandat 524.060 kb on + strandat 524.060 kb on + strandat 524.060 kb on + strandat 524.060 kb on + strandat 524.067 kb on + strandat 524.068 kb on - strandat 524.080 kb on + strandat 524.080 kb on + strandat 524.080 kb on + strandat 524.081 kb on + strandat 524.083 kb on + strandat 524.083 kb on + strandat 524.088 kb on - strandat 524.091 kb on - strandat 524.127 kb on - strandat 524.129 kb on - strandat 524.132 kb on - strandat 524.211 kb on - strandat 524.818 kb on - strandat 525.015 kb on - strandat 525.025 kb on - strandat 525.027 kb on + strandat 525.030 kb on + strandat 525.038 kb on - strandat 525.038 kb on - strandat 525.038 kb on - strandat 525.046 kb on - strandat 525.048 kb on - strandat 525.063 kb on - strandat 525.168 kb on + strand, within MPMX20_00508at 525.264 kb on + strand, within MPMX20_00508at 525.331 kb on + strand, within MPMX20_00508at 525.331 kb on + strand, within MPMX20_00508at 525.339 kb on - strand, within MPMX20_00508at 525.339 kb on - strand, within MPMX20_00508at 525.367 kb on + strand, within MPMX20_00508at 525.485 kb on - strand, within MPMX20_00508at 525.492 kb on + strand, within MPMX20_00508at 525.492 kb on + strand, within MPMX20_00508at 525.518 kb on - strand, within MPMX20_00508at 525.521 kb on - strand, within MPMX20_00508at 525.524 kb on + strand, within MPMX20_00508at 525.553 kb on + strand, within MPMX20_00508at 525.561 kb on - strand, within MPMX20_00508at 525.585 kb on + strand, within MPMX20_00508at 525.593 kb on - strand, within MPMX20_00508at 525.593 kb on - strand, within MPMX20_00508at 525.631 kb on + strand, within MPMX20_00508at 525.632 kb on + strand, within MPMX20_00508at 525.632 kb on + strand, within MPMX20_00508at 525.691 kb on + strand, within MPMX20_00508at 525.698 kb on - strand, within MPMX20_00508at 525.722 kb on + strand, within MPMX20_00508at 525.722 kb on + strand, within MPMX20_00508at 525.730 kb on - strand, within MPMX20_00508at 525.730 kb on - strand, within MPMX20_00508at 525.735 kb on - strand, within MPMX20_00508at 525.735 kb on - strand, within MPMX20_00508at 525.735 kb on - strand, within MPMX20_00508

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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523,263 + MPMX20_00505 0.72 -1.8
523,265 + MPMX20_00505 0.73 -1.7
523,273 - MPMX20_00505 0.75 -3.1
523,273 - MPMX20_00505 0.75 +0.4
523,273 - MPMX20_00505 0.75 -0.5
523,273 - MPMX20_00505 0.75 -1.8
523,341 + +0.5
523,404 + -0.1
523,409 + -1.8
523,409 + +1.4
523,412 - -0.1
523,417 - +0.1
523,417 - -0.1
523,417 - -1.5
523,429 + -1.5
523,466 - MPMX20_00506 0.20 -0.4
523,477 + MPMX20_00506 0.23 -3.9
523,477 + MPMX20_00506 0.23 +0.4
523,477 + MPMX20_00506 0.23 -3.3
523,481 + MPMX20_00506 0.25 -1.2
523,516 - MPMX20_00506 0.35 -1.3
523,516 - MPMX20_00506 0.35 -0.2
523,642 - MPMX20_00506 0.74 -0.8
523,678 - MPMX20_00506 0.85 +0.0
523,679 + MPMX20_00506 0.86 -1.8
523,679 + MPMX20_00506 0.86 -0.2
523,679 + MPMX20_00506 0.86 -1.8
523,679 + MPMX20_00506 0.86 -1.4
523,679 + MPMX20_00506 0.86 +0.1
523,679 - MPMX20_00506 0.86 +0.1
523,679 - MPMX20_00506 0.86 +0.4
523,687 - MPMX20_00506 0.88 -1.4
523,687 - MPMX20_00506 0.88 +0.7
523,687 - MPMX20_00506 0.88 -1.8
523,687 - MPMX20_00506 0.88 +1.8
523,687 - MPMX20_00506 0.88 +1.4
523,687 - MPMX20_00506 0.88 -0.6
523,687 - MPMX20_00506 0.88 -0.2
523,687 - MPMX20_00506 0.88 -0.0
523,687 - MPMX20_00506 0.88 +1.4
523,694 + +0.2
523,694 + +0.4
523,694 + +0.6
523,694 + -0.2
523,694 + -0.0
523,701 + +0.8
523,702 - -0.8
523,702 - +0.6
523,702 - -1.1
523,702 - +0.6
523,702 - +0.3
523,702 - -1.0
523,702 - -1.5
523,702 - +0.0
523,702 - -1.2
523,702 - -0.2
523,702 - -0.6
523,709 - -2.4
523,747 + -0.7
523,747 + -2.1
523,747 + +0.1
523,747 + +2.1
523,747 + -2.1
523,747 + -1.7
523,747 + -0.8
523,752 + -1.3
523,752 + +0.1
523,752 + -0.2
523,752 + -1.5
523,752 + -2.9
523,752 + +0.6
523,752 + +0.4
523,752 + +1.1
523,752 + -3.2
523,752 + +3.8
523,755 - -0.3
523,755 - +1.2
523,755 - +1.0
523,755 - +0.2
523,755 - -1.0
523,755 - +0.1
523,755 - -1.2
523,755 - -1.9
523,755 - +1.1
523,755 - -0.1
523,755 - -0.2
523,755 - -0.0
523,755 - -0.3
523,755 - +0.2
523,755 - +1.5
523,755 - -2.0
523,755 - +1.3
523,757 + +0.8
523,757 + -2.9
523,757 + +1.4
523,760 - +0.7
523,760 - -0.4
523,760 - +0.6
523,760 - -0.9
523,760 - +0.2
523,760 - -1.2
523,760 - +0.8
523,760 - -2.0
523,760 - +0.8
523,760 - +1.1
523,760 - -1.0
523,760 - -2.6
523,760 - -1.2
523,806 + -2.0
523,806 + -0.2
523,808 + -0.4
523,812 + -2.3
523,812 + -1.1
523,814 - -2.3
523,816 - -2.0
523,818 + +2.7
523,818 + +0.8
523,821 - -0.7
523,821 - +1.8
523,826 - +2.8
523,826 - -0.7
523,826 - +1.5
523,839 - -1.6
523,839 - -0.5
523,841 - -0.7
523,864 + -0.8
523,864 + +0.2
523,869 + +0.8
523,869 + +0.9
523,869 + -1.5
523,869 + -0.2
523,885 + -1.8
523,885 + +0.1
523,886 + +0.8
523,893 - -1.5
523,944 + -0.9
523,944 + -0.8
523,944 + +0.1
523,945 + +0.1
523,945 + +0.8
523,952 - +1.0
523,953 - +0.4
523,966 + -0.9
523,985 - +0.6
524,003 - -2.1
524,007 + +1.7
524,013 - -0.8
524,025 + +0.1
524,026 + +0.8
524,033 - -1.0
524,035 + -1.6
524,044 + +0.6
524,044 + +0.5
524,052 - -0.8
524,052 - -0.8
524,057 - -2.5
524,057 - +1.6
524,059 + -3.5
524,060 + +3.0
524,060 + -0.1
524,060 + -0.5
524,060 + +4.6
524,067 + -0.3
524,068 - -1.8
524,080 + -1.0
524,080 + +0.3
524,080 + -1.9
524,081 + +1.5
524,083 + -0.1
524,083 + -2.0
524,088 - -0.1
524,091 - +0.6
524,127 - +1.4
524,129 - -2.0
524,132 - -0.9
524,211 - -0.8
524,818 - -0.7
525,015 - +0.2
525,025 - +0.7
525,027 + -0.2
525,030 + -0.7
525,038 - -1.2
525,038 - -1.7
525,038 - +0.8
525,046 - +0.8
525,048 - -2.6
525,063 - +1.0
525,168 + MPMX20_00508 0.13 -0.7
525,264 + MPMX20_00508 0.23 +0.7
525,331 + MPMX20_00508 0.30 +2.4
525,331 + MPMX20_00508 0.30 +0.2
525,339 - MPMX20_00508 0.31 -0.6
525,339 - MPMX20_00508 0.31 -1.9
525,367 + MPMX20_00508 0.34 +0.1
525,485 - MPMX20_00508 0.46 +0.8
525,492 + MPMX20_00508 0.47 -0.4
525,492 + MPMX20_00508 0.47 -0.7
525,518 - MPMX20_00508 0.49 +0.7
525,521 - MPMX20_00508 0.50 -1.0
525,524 + MPMX20_00508 0.50 -1.3
525,553 + MPMX20_00508 0.53 -1.2
525,561 - MPMX20_00508 0.54 -1.5
525,585 + MPMX20_00508 0.56 -0.9
525,593 - MPMX20_00508 0.57 -0.9
525,593 - MPMX20_00508 0.57 +0.4
525,631 + MPMX20_00508 0.61 -1.5
525,632 + MPMX20_00508 0.61 -3.0
525,632 + MPMX20_00508 0.61 -1.2
525,691 + MPMX20_00508 0.67 +0.8
525,698 - MPMX20_00508 0.68 -1.5
525,722 + MPMX20_00508 0.71 -0.5
525,722 + MPMX20_00508 0.71 -0.5
525,730 - MPMX20_00508 0.71 -1.4
525,730 - MPMX20_00508 0.71 +0.4
525,735 - MPMX20_00508 0.72 -2.6
525,735 - MPMX20_00508 0.72 +0.1
525,735 - MPMX20_00508 0.72 -1.0

Or see this region's nucleotide sequence