Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00123

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00121 and MPMX20_00122 are separated by 246 nucleotidesMPMX20_00122 and MPMX20_00123 are separated by 11 nucleotidesMPMX20_00123 and MPMX20_00124 are separated by 32 nucleotidesMPMX20_00124 and MPMX20_00125 overlap by 1 nucleotides MPMX20_00121: MPMX20_00121 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 122,886 to 124,430 _00121 MPMX20_00122: MPMX20_00122 - putative protein YibN, at 124,677 to 125,108 _00122 MPMX20_00123: MPMX20_00123 - Glutaredoxin 3, at 125,120 to 125,371 _00123 MPMX20_00124: MPMX20_00124 - Protein-export protein SecB, at 125,404 to 125,871 _00124 MPMX20_00125: MPMX20_00125 - Glycerol-3-phosphate dehydrogenase [NAD(P)+], at 125,871 to 126,890 _00125 Position (kb) 125 126Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 124.122 kb on - strand, within MPMX20_00121at 124.122 kb on - strand, within MPMX20_00121at 124.127 kb on - strand, within MPMX20_00121at 124.127 kb on - strand, within MPMX20_00121at 124.213 kb on + strand, within MPMX20_00121at 124.227 kb on - strand, within MPMX20_00121at 124.227 kb on - strand, within MPMX20_00121at 124.279 kb on - strandat 124.291 kb on + strandat 124.299 kb on - strandat 124.315 kb on - strandat 124.370 kb on - strandat 124.379 kb on + strandat 124.387 kb on - strandat 124.406 kb on - strandat 124.443 kb on + strandat 124.530 kb on - strandat 124.531 kb on - strandat 124.596 kb on - strandat 124.596 kb on - strandat 124.596 kb on - strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.624 kb on + strandat 124.625 kb on + strandat 124.625 kb on + strandat 124.625 kb on + strandat 124.625 kb on - strandat 124.630 kb on + strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.632 kb on - strandat 124.633 kb on - strandat 124.633 kb on - strandat 124.665 kb on + strandat 124.713 kb on + strandat 124.713 kb on + strandat 124.713 kb on + strandat 124.744 kb on + strand, within MPMX20_00122at 124.751 kb on + strand, within MPMX20_00122at 124.754 kb on + strand, within MPMX20_00122at 124.784 kb on + strand, within MPMX20_00122at 124.792 kb on - strand, within MPMX20_00122at 124.792 kb on - strand, within MPMX20_00122at 124.796 kb on + strand, within MPMX20_00122at 124.930 kb on + strand, within MPMX20_00122at 124.949 kb on + strand, within MPMX20_00122at 124.949 kb on + strand, within MPMX20_00122at 124.957 kb on - strand, within MPMX20_00122at 124.972 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.018 kb on + strand, within MPMX20_00122at 125.046 kb on + strand, within MPMX20_00122at 125.057 kb on + strand, within MPMX20_00122at 125.120 kb on - strandat 125.180 kb on + strand, within MPMX20_00123at 125.316 kb on + strand, within MPMX20_00123at 125.352 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
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124,122 - MPMX20_00121 0.80 -1.4
124,122 - MPMX20_00121 0.80 -2.9
124,127 - MPMX20_00121 0.80 +0.8
124,127 - MPMX20_00121 0.80 -0.1
124,213 + MPMX20_00121 0.86 +0.9
124,227 - MPMX20_00121 0.87 -0.7
124,227 - MPMX20_00121 0.87 +0.8
124,279 - -0.9
124,291 + -0.4
124,299 - -2.7
124,315 - +0.1
124,370 - +0.8
124,379 + -0.4
124,387 - -0.2
124,406 - +2.4
124,443 + -1.4
124,530 - +0.3
124,531 - -0.6
124,596 - -0.2
124,596 - +1.1
124,596 - -0.8
124,624 + +1.6
124,624 + -2.7
124,624 + +0.7
124,624 + +0.9
124,624 + -1.1
124,624 + -3.1
124,624 + -0.8
124,624 + -1.9
124,625 + -0.9
124,625 + -1.2
124,625 + +0.1
124,625 - +0.2
124,630 + -0.6
124,632 - -1.5
124,632 - -0.8
124,632 - +0.8
124,632 - -1.1
124,632 - +0.8
124,632 - +2.1
124,632 - -1.6
124,632 - -0.7
124,632 - -1.3
124,633 - +2.0
124,633 - -2.7
124,665 + -1.1
124,713 + -1.9
124,713 + -0.8
124,713 + -2.3
124,744 + MPMX20_00122 0.16 -3.0
124,751 + MPMX20_00122 0.17 -2.0
124,754 + MPMX20_00122 0.18 +0.1
124,784 + MPMX20_00122 0.25 +0.4
124,792 - MPMX20_00122 0.27 +0.8
124,792 - MPMX20_00122 0.27 +3.0
124,796 + MPMX20_00122 0.28 +2.4
124,930 + MPMX20_00122 0.59 -0.5
124,949 + MPMX20_00122 0.63 +1.2
124,949 + MPMX20_00122 0.63 -0.3
124,957 - MPMX20_00122 0.65 +3.4
124,972 + MPMX20_00122 0.68 -1.2
125,018 + MPMX20_00122 0.79 +1.4
125,018 + MPMX20_00122 0.79 -2.5
125,018 + MPMX20_00122 0.79 -0.4
125,018 + MPMX20_00122 0.79 -0.2
125,018 + MPMX20_00122 0.79 +0.4
125,046 + MPMX20_00122 0.85 -0.5
125,057 + MPMX20_00122 0.88 +0.6
125,120 - +2.4
125,180 + MPMX20_00123 0.24 -1.5
125,316 + MPMX20_00123 0.78 -1.0
125,352 - -2.1

Or see this region's nucleotide sequence