Strain Fitness in Enterobacter sp. TBS

Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00107

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040
				remove
106,696	-	MPMX20_00106	0.11	-0.8
106,696	-	MPMX20_00106	0.11	+2.4
106,696	-	MPMX20_00106	0.11	-1.5
106,701	-	MPMX20_00106	0.12	+2.4
106,710	-	MPMX20_00106	0.13	-0.8
106,731	-	MPMX20_00106	0.14	-0.6
106,741	-	MPMX20_00106	0.15	-0.6
106,781	+	MPMX20_00106	0.19	-0.6
106,814	+	MPMX20_00106	0.22	+0.4
106,839	+	MPMX20_00106	0.24	-1.1
106,849	+	MPMX20_00106	0.25	-0.9
106,858	+	MPMX20_00106	0.26	-0.8
106,959	-	MPMX20_00106	0.35	-0.4
106,971	+	MPMX20_00106	0.36	-0.6
106,979	-	MPMX20_00106	0.36	+2.4
106,979	-	MPMX20_00106	0.36	+0.1
106,979	-	MPMX20_00106	0.36	-0.4
106,979	-	MPMX20_00106	0.36	+0.8
107,019	-	MPMX20_00106	0.40	-0.4
107,028	+	MPMX20_00106	0.41	+1.4
107,067	+	MPMX20_00106	0.44	-0.8
107,113	+	MPMX20_00106	0.48	+2.4
107,113	+	MPMX20_00106	0.48	+0.1
107,113	+	MPMX20_00106	0.48	-2.1
107,125	+	MPMX20_00106	0.49	+2.4
107,125	+	MPMX20_00106	0.49	+2.4
107,125	+	MPMX20_00106	0.49	+1.4
107,125	+	MPMX20_00106	0.49	+1.4
107,125	+	MPMX20_00106	0.49	+0.1
107,125	+	MPMX20_00106	0.49	-1.6
107,125	+	MPMX20_00106	0.49	-1.3
107,125	+	MPMX20_00106	0.49	-0.6
107,125	+	MPMX20_00106	0.49	-0.4
107,125	+	MPMX20_00106	0.49	-1.2
107,125	+	MPMX20_00106	0.49	+0.1
107,133	-	MPMX20_00106	0.50	+0.1
107,133	-	MPMX20_00106	0.50	+2.4
107,133	-	MPMX20_00106	0.50	+0.8
107,133	-	MPMX20_00106	0.50	-1.1
107,133	-	MPMX20_00106	0.50	-0.4
107,439	+	MPMX20_00106	0.77	-0.4
107,447	-	MPMX20_00106	0.78	+0.4
107,479	+	MPMX20_00106	0.81	-0.6
107,579	+	MPMX20_00106	0.90	-0.2
107,601	-			+0.4
107,699	+			-0.5
107,793	-			-1.2
107,887	+	MPMX20_00107	0.18	-3.0
108,046	-	MPMX20_00107	0.33	-2.1
108,063	+	MPMX20_00107	0.35	-2.2
108,075	+	MPMX20_00107	0.36	-1.2
108,083	-	MPMX20_00107	0.36	-1.3
108,105	+	MPMX20_00107	0.38	-0.2
108,113	-	MPMX20_00107	0.39	-0.8
108,140	-	MPMX20_00107	0.42	+0.9
108,152	-	MPMX20_00107	0.43	-2.4
108,188	+	MPMX20_00107	0.46	+1.4
108,188	+	MPMX20_00107	0.46	-3.0
108,232	-	MPMX20_00107	0.50	-2.0
108,318	-	MPMX20_00107	0.58	-0.6
108,403	+	MPMX20_00107	0.66	-1.5
108,413	-	MPMX20_00107	0.67	+0.4
108,440	-	MPMX20_00107	0.70	-0.3
108,459	+	MPMX20_00107	0.72	-0.1
108,473	+	MPMX20_00107	0.73	+0.4
108,494	-	MPMX20_00107	0.75	-0.9
108,494	-	MPMX20_00107	0.75	-3.4
108,507	-	MPMX20_00107	0.76	-2.0
108,525	+	MPMX20_00107	0.78	-0.8
108,551	-	MPMX20_00107	0.80	+0.8
108,555	+	MPMX20_00107	0.81	+0.6
108,571	-	MPMX20_00107	0.82	-2.0
108,737	-			+0.6
108,739	+			+0.8
108,755	-			-0.8
108,770	+			-0.9
108,770	+			-1.7
108,772	+			-0.6
108,772	+			+1.4
108,778	-			-1.6
108,815	-			+1.1
108,823	-			+1.7
108,850	+			-2.0
108,850	+			+1.3
108,850	+			-1.3
108,851	+			+0.8
108,858	-			-0.2
108,858	-			+0.4
108,858	-			-0.6
108,858	-			+0.1
108,858	-			-2.7
108,861	+			-2.7
108,861	+			+1.3
108,861	+			-2.7
108,867	-			+0.8
108,871	+			-2.5
108,871	+			-0.6
108,871	+			-2.6
108,873	+			+0.8
108,873	+			+0.8
108,879	-			-1.0
108,879	-			+1.5
108,879	-			+1.7
108,879	-			-0.1
108,879	-			-0.6
108,879	-			-2.0
108,881	-			+2.4
108,881	-			+0.4
108,881	-			-0.8
108,881	-			+1.3
108,881	-			-0.1
108,885	+			+2.7
108,886	-			+0.1
108,886	-			-1.3
108,886	-			+0.4
108,886	-			+1.4
108,891	-			+1.0
108,892	+			-0.2
108,898	-			+0.1
108,898	-			-2.5
108,898	-			+0.3
108,960	-			-0.4
109,004	+			+2.4
109,013	-	MPMX20_00108	0.10	-4.9
109,132	-	MPMX20_00108	0.23	-2.1
109,139	+	MPMX20_00108	0.23	-4.8
109,172	+	MPMX20_00108	0.27	-1.0
109,272	+	MPMX20_00108	0.37	-5.1
109,337	+	MPMX20_00108	0.44	-2.7
109,354	+	MPMX20_00108	0.46	+0.5
109,374	+	MPMX20_00108	0.48	-2.0
109,376	-	MPMX20_00108	0.48	+1.4
109,385	+	MPMX20_00108	0.49	-2.1
109,385	+	MPMX20_00108	0.49	-1.4
109,393	-	MPMX20_00108	0.50	-3.4
109,393	-	MPMX20_00108	0.50	-4.2
109,393	-	MPMX20_00108	0.50	-2.8
109,393	-	MPMX20_00108	0.50	-0.2
109,420	+	MPMX20_00108	0.53	-0.2
109,425	+	MPMX20_00108	0.53	-2.6
109,428	-	MPMX20_00108	0.53	-3.4
109,449	+	MPMX20_00108	0.56	-3.3
109,454	+	MPMX20_00108	0.56	-1.4
109,454	+	MPMX20_00108	0.56	-1.7
109,509	-	MPMX20_00108	0.62	-4.0
109,522	+	MPMX20_00108	0.63	-4.0
109,530	-	MPMX20_00108	0.64	-0.2
109,530	-	MPMX20_00108	0.64	+0.1
109,546	+	MPMX20_00108	0.66	-3.7
109,557	+	MPMX20_00108	0.67	-3.4
109,557	+	MPMX20_00108	0.67	-1.2
109,557	+	MPMX20_00108	0.67	-0.4
109,557	+	MPMX20_00108	0.67	-1.5
109,557	+	MPMX20_00108	0.67	-4.1
109,557	+	MPMX20_00108	0.67	-0.9
109,557	+	MPMX20_00108	0.67	-3.3
109,565	+	MPMX20_00108	0.68	-3.3
109,565	+	MPMX20_00108	0.68	-0.2
109,565	+	MPMX20_00108	0.68	-3.2
109,565	+	MPMX20_00108	0.68	-1.5
109,565	+	MPMX20_00108	0.68	+0.1
109,565	+	MPMX20_00108	0.68	-3.1
109,565	+	MPMX20_00108	0.68	-2.6
109,565	+	MPMX20_00108	0.68	+0.4
109,565	+	MPMX20_00108	0.68	-3.5
109,565	+	MPMX20_00108	0.68	-1.8
109,565	+	MPMX20_00108	0.68	-1.2
109,565	+	MPMX20_00108	0.68	-2.9
109,565	+	MPMX20_00108	0.68	-3.8
109,565	+	MPMX20_00108	0.68	-0.2
109,565	+	MPMX20_00108	0.68	-3.4
109,565	+	MPMX20_00108	0.68	-4.7
109,565	+	MPMX20_00108	0.68	-0.4
109,565	+	MPMX20_00108	0.68	-1.9
109,565	+	MPMX20_00108	0.68	-0.6
109,565	+	MPMX20_00108	0.68	-2.1
109,565	+	MPMX20_00108	0.68	-1.8
109,565	-	MPMX20_00108	0.68	-1.7
109,565	-	MPMX20_00108	0.68	-1.7
109,565	-	MPMX20_00108	0.68	-4.4
109,573	-	MPMX20_00108	0.69	-0.8
109,573	-	MPMX20_00108	0.69	-2.6
109,573	-	MPMX20_00108	0.69	-2.1
109,573	-	MPMX20_00108	0.69	-0.4
109,573	-	MPMX20_00108	0.69	-4.5
109,573	-	MPMX20_00108	0.69	-1.3
109,573	-	MPMX20_00108	0.69	-2.1
109,573	-	MPMX20_00108	0.69	-4.8
109,573	-	MPMX20_00108	0.69	-2.0
109,573	-	MPMX20_00108	0.69	-0.8
109,573	-	MPMX20_00108	0.69	-1.5
109,573	-	MPMX20_00108	0.69	-2.4
109,575	+	MPMX20_00108	0.69	-2.0
109,575	+	MPMX20_00108	0.69	-2.0
109,575	+	MPMX20_00108	0.69	-2.7
109,575	+	MPMX20_00108	0.69	-1.4
109,575	+	MPMX20_00108	0.69	-2.1
109,575	+	MPMX20_00108	0.69	-2.2
109,575	+	MPMX20_00108	0.69	-4.7
109,575	+	MPMX20_00108	0.69	-1.7
109,580	+	MPMX20_00108	0.69	-3.2
109,580	+	MPMX20_00108	0.69	-0.1
109,580	+	MPMX20_00108	0.69	-1.8
109,580	+	MPMX20_00108	0.69	-4.7
109,580	+	MPMX20_00108	0.69	-1.5
109,580	+	MPMX20_00108	0.69	-0.6
109,583	-	MPMX20_00108	0.70	-3.6
109,583	-	MPMX20_00108	0.70	+1.4
109,588	-	MPMX20_00108	0.70	-3.6
109,588	-	MPMX20_00108	0.70	-0.8
109,588	-	MPMX20_00108	0.70	-2.9
109,588	-	MPMX20_00108	0.70	-2.0
109,588	-	MPMX20_00108	0.70	-3.0
109,588	-	MPMX20_00108	0.70	-3.4
109,602	-	MPMX20_00108	0.72	+0.8
109,622	+	MPMX20_00108	0.74	-3.4
109,622	+	MPMX20_00108	0.74	-2.0
109,622	+	MPMX20_00108	0.74	-0.3
109,630	-	MPMX20_00108	0.74	-0.2
109,630	-	MPMX20_00108	0.74	-0.7
109,630	-	MPMX20_00108	0.74	-1.4
109,637	+	MPMX20_00108	0.75	-1.9
109,637	+	MPMX20_00108	0.75	-1.3
109,637	+	MPMX20_00108	0.75	-3.8
109,645	-	MPMX20_00108	0.76	-4.2
109,645	-	MPMX20_00108	0.76	+0.4
109,645	-	MPMX20_00108	0.76	-0.6
109,656	+	MPMX20_00108	0.77	-0.2
109,656	+	MPMX20_00108	0.77	-2.1
109,656	+	MPMX20_00108	0.77	-4.6
109,656	+	MPMX20_00108	0.77	-1.6
109,656	+	MPMX20_00108	0.77	-1.3
109,656	+	MPMX20_00108	0.77	-2.6
109,656	+	MPMX20_00108	0.77	-3.7
109,656	+	MPMX20_00108	0.77	-3.5
109,662	+	MPMX20_00108	0.78	-4.2
109,664	-	MPMX20_00108	0.78	-2.7
109,664	-	MPMX20_00108	0.78	+0.4
109,664	-	MPMX20_00108	0.78	-2.1
109,664	-	MPMX20_00108	0.78	-0.8
109,669	+	MPMX20_00108	0.79	-1.2
109,669	+	MPMX20_00108	0.79	-3.1
109,670	-	MPMX20_00108	0.79	-2.8
109,684	-	MPMX20_00108	0.80	-3.8
109,694	-	MPMX20_00108	0.81	-4.9
109,749	+	MPMX20_00108	0.87	+1.7
109,749	+	MPMX20_00108	0.87	-5.1

Or see this region's nucleotide sequence