Experiment: TSB plate, 1:1 coculture with Brevibacillus agri TBS_043
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01937 and MPMX20_01938 are separated by 192 nucleotides MPMX20_01938 and MPMX20_01939 are separated by 29 nucleotides MPMX20_01939 and MPMX20_01940 are separated by 4 nucleotides MPMX20_01940 and MPMX20_01941 are separated by 341 nucleotides
MPMX20_01937: MPMX20_01937 - Formate dehydrogenase H, at 2,033,241 to 2,035,391
_01937
MPMX20_01938: MPMX20_01938 - putative two-component-system connector protein AriR, at 2,035,584 to 2,035,862
_01938
MPMX20_01939: MPMX20_01939 - hypothetical protein, at 2,035,892 to 2,036,212
_01939
MPMX20_01940: MPMX20_01940 - putative two-component-system connector protein YcgZ, at 2,036,217 to 2,036,456
_01940
MPMX20_01941: MPMX20_01941 - Blue light- and temperature-regulated antirepressor BluF, at 2,036,798 to 2,038,018
_01941
Position (kb)
2035
2036
2037 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 2034.929 kb on - strand, within MPMX20_01937 at 2034.940 kb on - strand, within MPMX20_01937 at 2034.959 kb on + strand, within MPMX20_01937 at 2034.965 kb on + strand, within MPMX20_01937 at 2035.003 kb on + strand, within MPMX20_01937 at 2035.018 kb on - strand, within MPMX20_01937 at 2035.070 kb on + strand, within MPMX20_01937 at 2035.098 kb on + strand, within MPMX20_01937 at 2035.103 kb on + strand, within MPMX20_01937 at 2035.153 kb on - strand, within MPMX20_01937 at 2035.156 kb on - strand, within MPMX20_01937 at 2035.185 kb on - strand at 2035.198 kb on + strand at 2035.202 kb on + strand at 2035.216 kb on - strand at 2035.223 kb on + strand at 2035.251 kb on + strand at 2035.265 kb on + strand at 2035.273 kb on - strand at 2035.273 kb on - strand at 2035.273 kb on - strand at 2035.275 kb on + strand at 2035.275 kb on + strand at 2035.283 kb on - strand at 2035.360 kb on - strand at 2035.363 kb on - strand at 2035.368 kb on - strand at 2035.395 kb on + strand at 2035.395 kb on + strand at 2035.403 kb on - strand at 2035.430 kb on + strand at 2035.430 kb on + strand at 2035.430 kb on + strand at 2035.430 kb on + strand at 2035.430 kb on + strand at 2035.435 kb on + strand at 2035.443 kb on - strand at 2035.460 kb on - strand at 2035.550 kb on - strand at 2035.608 kb on - strand at 2035.717 kb on + strand, within MPMX20_01938 at 2035.722 kb on + strand, within MPMX20_01938 at 2035.722 kb on + strand, within MPMX20_01938 at 2035.722 kb on + strand, within MPMX20_01938 at 2035.722 kb on + strand, within MPMX20_01938 at 2035.722 kb on + strand, within MPMX20_01938 at 2035.730 kb on - strand, within MPMX20_01938 at 2035.732 kb on - strand, within MPMX20_01938 at 2035.734 kb on + strand, within MPMX20_01938 at 2035.734 kb on + strand, within MPMX20_01938 at 2035.742 kb on - strand, within MPMX20_01938 at 2035.742 kb on - strand, within MPMX20_01938 at 2035.742 kb on - strand, within MPMX20_01938 at 2035.746 kb on + strand, within MPMX20_01938 at 2035.761 kb on + strand, within MPMX20_01938 at 2035.761 kb on + strand, within MPMX20_01938 at 2035.769 kb on - strand, within MPMX20_01938 at 2035.837 kb on + strand at 2035.837 kb on + strand at 2035.838 kb on - strand at 2035.860 kb on + strand at 2035.865 kb on + strand at 2035.868 kb on - strand at 2035.939 kb on + strand, within MPMX20_01939 at 2035.947 kb on - strand, within MPMX20_01939 at 2035.947 kb on - strand, within MPMX20_01939 at 2035.952 kb on - strand, within MPMX20_01939 at 2035.953 kb on + strand, within MPMX20_01939 at 2035.968 kb on - strand, within MPMX20_01939 at 2035.983 kb on - strand, within MPMX20_01939 at 2035.988 kb on + strand, within MPMX20_01939 at 2035.988 kb on + strand, within MPMX20_01939 at 2035.991 kb on - strand, within MPMX20_01939 at 2035.998 kb on + strand, within MPMX20_01939 at 2035.998 kb on + strand, within MPMX20_01939 at 2036.016 kb on - strand, within MPMX20_01939 at 2036.017 kb on - strand, within MPMX20_01939 at 2036.126 kb on - strand, within MPMX20_01939 at 2036.143 kb on + strand, within MPMX20_01939 at 2036.169 kb on + strand, within MPMX20_01939 at 2036.192 kb on + strand at 2036.215 kb on - strand at 2036.222 kb on - strand at 2036.248 kb on + strand, within MPMX20_01940 at 2036.256 kb on - strand, within MPMX20_01940 at 2036.256 kb on - strand, within MPMX20_01940 at 2036.272 kb on - strand, within MPMX20_01940 at 2036.300 kb on + strand, within MPMX20_01940 at 2036.300 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.308 kb on - strand, within MPMX20_01940 at 2036.361 kb on - strand, within MPMX20_01940 at 2036.361 kb on - strand, within MPMX20_01940 at 2036.376 kb on - strand, within MPMX20_01940 at 2036.407 kb on - strand, within MPMX20_01940 at 2036.437 kb on + strand at 2036.437 kb on + strand at 2036.774 kb on + strand at 2036.781 kb on - strand at 2036.781 kb on - strand at 2036.920 kb on + strand, within MPMX20_01941 at 2036.947 kb on + strand, within MPMX20_01941 at 2036.968 kb on + strand, within MPMX20_01941 at 2037.017 kb on - strand, within MPMX20_01941 at 2037.017 kb on - strand, within MPMX20_01941 at 2037.018 kb on - strand, within MPMX20_01941 at 2037.102 kb on + strand, within MPMX20_01941
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 remove 2,034,929 - MPMX20_01937 0.78 +1.8 2,034,940 - MPMX20_01937 0.79 -1.8 2,034,959 + MPMX20_01937 0.80 +0.7 2,034,965 + MPMX20_01937 0.80 +0.4 2,035,003 + MPMX20_01937 0.82 +0.3 2,035,018 - MPMX20_01937 0.83 +0.6 2,035,070 + MPMX20_01937 0.85 -1.6 2,035,098 + MPMX20_01937 0.86 -0.9 2,035,103 + MPMX20_01937 0.87 +2.5 2,035,153 - MPMX20_01937 0.89 -0.6 2,035,156 - MPMX20_01937 0.89 +1.7 2,035,185 - -0.7 2,035,198 + -1.3 2,035,202 + +7.8 2,035,216 - +0.5 2,035,223 + +1.6 2,035,251 + -0.3 2,035,265 + +0.2 2,035,273 - +1.3 2,035,273 - +0.2 2,035,273 - -0.4 2,035,275 + -0.8 2,035,275 + -0.7 2,035,283 - -0.4 2,035,360 - -1.3 2,035,363 - +0.6 2,035,368 - -0.6 2,035,395 + -0.3 2,035,395 + +1.1 2,035,403 - +2.1 2,035,430 + +1.3 2,035,430 + +0.2 2,035,430 + +3.0 2,035,430 + -0.5 2,035,430 + -1.4 2,035,435 + +1.9 2,035,443 - +0.7 2,035,460 - -0.1 2,035,550 - -0.6 2,035,608 - -0.1 2,035,717 + MPMX20_01938 0.48 -1.2 2,035,722 + MPMX20_01938 0.49 +0.1 2,035,722 + MPMX20_01938 0.49 -1.2 2,035,722 + MPMX20_01938 0.49 -0.0 2,035,722 + MPMX20_01938 0.49 -0.2 2,035,722 + MPMX20_01938 0.49 +1.3 2,035,730 - MPMX20_01938 0.52 -0.1 2,035,732 - MPMX20_01938 0.53 +0.7 2,035,734 + MPMX20_01938 0.54 +0.6 2,035,734 + MPMX20_01938 0.54 -0.2 2,035,742 - MPMX20_01938 0.57 +0.3 2,035,742 - MPMX20_01938 0.57 -2.0 2,035,742 - MPMX20_01938 0.57 +0.7 2,035,746 + MPMX20_01938 0.58 -0.8 2,035,761 + MPMX20_01938 0.63 +0.9 2,035,761 + MPMX20_01938 0.63 -1.4 2,035,769 - MPMX20_01938 0.66 -0.7 2,035,837 + -1.7 2,035,837 + -1.2 2,035,838 - +0.1 2,035,860 + +0.1 2,035,865 + +1.3 2,035,868 - +3.3 2,035,939 + MPMX20_01939 0.15 -2.2 2,035,947 - MPMX20_01939 0.17 +2.5 2,035,947 - MPMX20_01939 0.17 -1.7 2,035,952 - MPMX20_01939 0.19 -1.4 2,035,953 + MPMX20_01939 0.19 +1.8 2,035,968 - MPMX20_01939 0.24 -1.0 2,035,983 - MPMX20_01939 0.28 +1.0 2,035,988 + MPMX20_01939 0.30 +0.1 2,035,988 + MPMX20_01939 0.30 +0.1 2,035,991 - MPMX20_01939 0.31 -1.9 2,035,998 + MPMX20_01939 0.33 -0.5 2,035,998 + MPMX20_01939 0.33 +1.1 2,036,016 - MPMX20_01939 0.39 -0.4 2,036,017 - MPMX20_01939 0.39 -1.5 2,036,126 - MPMX20_01939 0.73 -0.3 2,036,143 + MPMX20_01939 0.78 +1.3 2,036,169 + MPMX20_01939 0.86 -1.6 2,036,192 + -0.0 2,036,215 - -0.5 2,036,222 - +0.3 2,036,248 + MPMX20_01940 0.13 +4.6 2,036,256 - MPMX20_01940 0.16 +0.0 2,036,256 - MPMX20_01940 0.16 +0.1 2,036,272 - MPMX20_01940 0.23 -2.8 2,036,300 + MPMX20_01940 0.35 -0.2 2,036,300 - MPMX20_01940 0.35 -1.1 2,036,308 - MPMX20_01940 0.38 -1.8 2,036,308 - MPMX20_01940 0.38 -0.2 2,036,308 - MPMX20_01940 0.38 -0.5 2,036,361 - MPMX20_01940 0.60 -2.1 2,036,361 - MPMX20_01940 0.60 -1.1 2,036,376 - MPMX20_01940 0.66 +1.3 2,036,407 - MPMX20_01940 0.79 -1.6 2,036,437 + +0.6 2,036,437 + +0.0 2,036,774 + +1.2 2,036,781 - +2.6 2,036,781 - -2.0 2,036,920 + MPMX20_01941 0.10 -0.2 2,036,947 + MPMX20_01941 0.12 +9.8 2,036,968 + MPMX20_01941 0.14 +0.3 2,037,017 - MPMX20_01941 0.18 +0.1 2,037,017 - MPMX20_01941 0.18 +0.2 2,037,018 - MPMX20_01941 0.18 -0.6 2,037,102 + MPMX20_01941 0.25 -0.8
Or see this region's nucleotide sequence