Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04475

Experiment: M9 plate, 1:1 coculture with Brevibacillus agri TBS_043

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04474 and MPMX20_04475 are separated by 507 nucleotidesMPMX20_04475 and MPMX20_04476 are separated by 44 nucleotidesMPMX20_04476 and MPMX20_04477 are separated by 21 nucleotidesMPMX20_04477 and MPMX20_04478 are separated by 67 nucleotidesMPMX20_04478 and MPMX20_04479 are separated by 102 nucleotides MPMX20_04474: MPMX20_04474 - hypothetical protein, at 4,679,870 to 4,681,081 _04474 MPMX20_04475: MPMX20_04475 - tRNA-Pro, at 4,681,589 to 4,681,665 _04475 MPMX20_04476: MPMX20_04476 - tRNA-Leu, at 4,681,710 to 4,681,796 _04476 MPMX20_04477: MPMX20_04477 - tRNA-His, at 4,681,818 to 4,681,893 _04477 MPMX20_04478: MPMX20_04478 - tRNA-Arg, at 4,681,961 to 4,682,037 _04478 MPMX20_04479: MPMX20_04479 - putative transport protein YifK, at 4,682,140 to 4,683,525 _04479 Position (kb) 4681 4682Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4680.690 kb on - strand, within MPMX20_04474at 4680.698 kb on - strand, within MPMX20_04474at 4680.831 kb on - strand, within MPMX20_04474at 4680.845 kb on - strand, within MPMX20_04474at 4680.850 kb on - strand, within MPMX20_04474at 4680.914 kb on + strand, within MPMX20_04474at 4680.942 kb on + strand, within MPMX20_04474at 4680.995 kb on + strandat 4681.005 kb on + strandat 4681.038 kb on + strandat 4681.050 kb on - strandat 4681.057 kb on + strandat 4681.060 kb on + strandat 4681.065 kb on + strandat 4681.065 kb on - strandat 4681.165 kb on - strandat 4681.280 kb on - strandat 4681.283 kb on - strandat 4681.393 kb on - strandat 4681.502 kb on + strandat 4681.588 kb on - strandat 4681.676 kb on - strandat 4682.155 kb on + strandat 4682.322 kb on + strand, within MPMX20_04479at 4682.322 kb on + strand, within MPMX20_04479at 4682.330 kb on - strand, within MPMX20_04479at 4682.330 kb on - strand, within MPMX20_04479at 4682.353 kb on - strand, within MPMX20_04479at 4682.468 kb on - strand, within MPMX20_04479at 4682.483 kb on - strand, within MPMX20_04479at 4682.587 kb on - strand, within MPMX20_04479at 4682.604 kb on - strand, within MPMX20_04479at 4682.611 kb on + strand, within MPMX20_04479at 4682.632 kb on - strand, within MPMX20_04479

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Brevibacillus agri TBS_043
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4,680,690 - MPMX20_04474 0.68 -0.2
4,680,698 - MPMX20_04474 0.68 +0.3
4,680,831 - MPMX20_04474 0.79 +4.1
4,680,845 - MPMX20_04474 0.80 +1.7
4,680,850 - MPMX20_04474 0.81 -0.4
4,680,914 + MPMX20_04474 0.86 -1.0
4,680,942 + MPMX20_04474 0.88 +0.3
4,680,995 + -1.3
4,681,005 + +0.6
4,681,038 + -1.6
4,681,050 - +3.3
4,681,057 + +0.5
4,681,060 + -0.9
4,681,065 + -0.3
4,681,065 - +0.4
4,681,165 - -1.4
4,681,280 - +0.1
4,681,283 - +0.9
4,681,393 - -0.3
4,681,502 + +1.5
4,681,588 - -0.0
4,681,676 - +0.8
4,682,155 + +0.5
4,682,322 + MPMX20_04479 0.13 -1.1
4,682,322 + MPMX20_04479 0.13 +2.4
4,682,330 - MPMX20_04479 0.14 +1.4
4,682,330 - MPMX20_04479 0.14 -0.8
4,682,353 - MPMX20_04479 0.15 -0.0
4,682,468 - MPMX20_04479 0.24 -0.8
4,682,483 - MPMX20_04479 0.25 -1.2
4,682,587 - MPMX20_04479 0.32 +1.4
4,682,604 - MPMX20_04479 0.33 +0.6
4,682,611 + MPMX20_04479 0.34 -0.8
4,682,632 - MPMX20_04479 0.35 -3.1

Or see this region's nucleotide sequence