Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02379

Experiment: M9 plate, 1:1 coculture with Brevibacillus agri TBS_043

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02378 and MPMX20_02379 are separated by 48 nucleotidesMPMX20_02379 and MPMX20_02380 are separated by 221 nucleotides MPMX20_02378: MPMX20_02378 - Formate dehydrogenase, nitrate-inducible, major subunit, at 2,506,134 to 2,508,545 _02378 MPMX20_02379: MPMX20_02379 - Formate dehydrogenase, nitrate-inducible, major subunit, at 2,508,594 to 2,509,181 _02379 MPMX20_02380: MPMX20_02380 - Aromatic amino acid exporter YddG, at 2,509,403 to 2,510,281 _02380 Position (kb) 2508 2509 2510Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2507.624 kb on - strand, within MPMX20_02378at 2507.691 kb on + strand, within MPMX20_02378at 2507.753 kb on - strand, within MPMX20_02378at 2507.797 kb on + strand, within MPMX20_02378at 2507.805 kb on - strand, within MPMX20_02378at 2507.815 kb on - strand, within MPMX20_02378at 2507.828 kb on + strand, within MPMX20_02378at 2507.859 kb on - strand, within MPMX20_02378at 2507.866 kb on - strand, within MPMX20_02378at 2507.945 kb on - strand, within MPMX20_02378at 2507.997 kb on + strand, within MPMX20_02378at 2508.065 kb on + strand, within MPMX20_02378at 2508.117 kb on + strand, within MPMX20_02378at 2508.117 kb on + strand, within MPMX20_02378at 2508.117 kb on + strand, within MPMX20_02378at 2508.123 kb on + strand, within MPMX20_02378at 2508.125 kb on - strand, within MPMX20_02378at 2508.132 kb on - strand, within MPMX20_02378at 2508.208 kb on + strand, within MPMX20_02378at 2508.264 kb on + strand, within MPMX20_02378at 2508.265 kb on + strand, within MPMX20_02378at 2508.265 kb on + strand, within MPMX20_02378at 2508.273 kb on - strand, within MPMX20_02378at 2508.419 kb on + strandat 2508.500 kb on + strandat 2508.611 kb on - strandat 2508.634 kb on - strandat 2508.719 kb on + strand, within MPMX20_02379at 2508.727 kb on - strand, within MPMX20_02379at 2508.727 kb on - strand, within MPMX20_02379at 2508.727 kb on - strand, within MPMX20_02379at 2508.729 kb on - strand, within MPMX20_02379at 2508.845 kb on + strand, within MPMX20_02379at 2508.845 kb on + strand, within MPMX20_02379at 2508.845 kb on + strand, within MPMX20_02379at 2508.845 kb on + strand, within MPMX20_02379at 2508.853 kb on - strand, within MPMX20_02379at 2508.872 kb on - strand, within MPMX20_02379at 2508.888 kb on - strand, within MPMX20_02379at 2508.994 kb on + strand, within MPMX20_02379at 2508.994 kb on - strand, within MPMX20_02379at 2508.994 kb on - strand, within MPMX20_02379at 2509.007 kb on + strand, within MPMX20_02379at 2509.015 kb on - strand, within MPMX20_02379at 2509.024 kb on - strand, within MPMX20_02379at 2509.030 kb on + strand, within MPMX20_02379at 2509.035 kb on + strand, within MPMX20_02379at 2509.038 kb on - strand, within MPMX20_02379at 2509.038 kb on - strand, within MPMX20_02379at 2509.044 kb on + strand, within MPMX20_02379at 2509.052 kb on - strand, within MPMX20_02379at 2509.064 kb on + strand, within MPMX20_02379at 2509.134 kb on - strandat 2509.224 kb on + strandat 2509.362 kb on - strandat 2509.400 kb on + strandat 2509.400 kb on + strandat 2509.419 kb on - strandat 2509.431 kb on - strandat 2509.453 kb on - strandat 2509.453 kb on - strandat 2509.461 kb on + strandat 2509.463 kb on - strandat 2509.479 kb on + strandat 2509.491 kb on + strand, within MPMX20_02380at 2509.519 kb on + strand, within MPMX20_02380at 2509.519 kb on + strand, within MPMX20_02380at 2509.548 kb on - strand, within MPMX20_02380at 2509.615 kb on + strand, within MPMX20_02380at 2509.640 kb on + strand, within MPMX20_02380at 2509.645 kb on + strand, within MPMX20_02380at 2509.645 kb on + strand, within MPMX20_02380at 2509.653 kb on - strand, within MPMX20_02380at 2509.669 kb on + strand, within MPMX20_02380at 2509.707 kb on + strand, within MPMX20_02380at 2509.714 kb on + strand, within MPMX20_02380at 2509.715 kb on - strand, within MPMX20_02380at 2509.720 kb on - strand, within MPMX20_02380at 2509.720 kb on - strand, within MPMX20_02380at 2509.752 kb on + strand, within MPMX20_02380at 2509.752 kb on + strand, within MPMX20_02380at 2509.752 kb on + strand, within MPMX20_02380at 2509.758 kb on + strand, within MPMX20_02380at 2509.760 kb on - strand, within MPMX20_02380at 2509.769 kb on + strand, within MPMX20_02380at 2509.793 kb on - strand, within MPMX20_02380at 2509.811 kb on - strand, within MPMX20_02380at 2509.816 kb on - strand, within MPMX20_02380at 2509.820 kb on + strand, within MPMX20_02380at 2509.826 kb on + strand, within MPMX20_02380at 2509.826 kb on + strand, within MPMX20_02380at 2509.835 kb on - strand, within MPMX20_02380at 2509.835 kb on - strand, within MPMX20_02380at 2509.875 kb on + strand, within MPMX20_02380at 2509.881 kb on - strand, within MPMX20_02380at 2509.898 kb on + strand, within MPMX20_02380at 2509.913 kb on + strand, within MPMX20_02380at 2509.921 kb on - strand, within MPMX20_02380at 2509.923 kb on - strand, within MPMX20_02380at 2509.923 kb on - strand, within MPMX20_02380at 2509.956 kb on + strand, within MPMX20_02380at 2510.009 kb on - strand, within MPMX20_02380at 2510.030 kb on + strand, within MPMX20_02380at 2510.030 kb on + strand, within MPMX20_02380at 2510.037 kb on + strand, within MPMX20_02380at 2510.037 kb on + strand, within MPMX20_02380at 2510.049 kb on + strand, within MPMX20_02380at 2510.060 kb on + strand, within MPMX20_02380at 2510.068 kb on - strand, within MPMX20_02380at 2510.070 kb on + strand, within MPMX20_02380at 2510.075 kb on + strand, within MPMX20_02380at 2510.081 kb on + strand, within MPMX20_02380at 2510.083 kb on - strand, within MPMX20_02380at 2510.106 kb on + strand, within MPMX20_02380at 2510.114 kb on + strand, within MPMX20_02380at 2510.125 kb on + strand, within MPMX20_02380at 2510.125 kb on + strand, within MPMX20_02380at 2510.133 kb on - strand, within MPMX20_02380at 2510.141 kb on + strand, within MPMX20_02380at 2510.142 kb on - strand, within MPMX20_02380at 2510.157 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.159 kb on + strand, within MPMX20_02380at 2510.160 kb on - strand, within MPMX20_02380at 2510.162 kb on + strand, within MPMX20_02380at 2510.164 kb on + strand, within MPMX20_02380at 2510.164 kb on + strand, within MPMX20_02380at 2510.164 kb on + strand, within MPMX20_02380at 2510.164 kb on + strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.167 kb on - strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.169 kb on + strand, within MPMX20_02380at 2510.175 kb on - strand, within MPMX20_02380at 2510.177 kb on - strand, within MPMX20_02380at 2510.177 kb on - strand, within MPMX20_02380

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Brevibacillus agri TBS_043
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2,507,624 - MPMX20_02378 0.62 +0.0
2,507,691 + MPMX20_02378 0.65 -1.3
2,507,753 - MPMX20_02378 0.67 +1.0
2,507,797 + MPMX20_02378 0.69 -0.6
2,507,805 - MPMX20_02378 0.69 -0.7
2,507,815 - MPMX20_02378 0.70 +1.9
2,507,828 + MPMX20_02378 0.70 +0.0
2,507,859 - MPMX20_02378 0.72 +0.1
2,507,866 - MPMX20_02378 0.72 -0.6
2,507,945 - MPMX20_02378 0.75 +0.8
2,507,997 + MPMX20_02378 0.77 -0.3
2,508,065 + MPMX20_02378 0.80 -0.3
2,508,117 + MPMX20_02378 0.82 +0.2
2,508,117 + MPMX20_02378 0.82 -0.7
2,508,117 + MPMX20_02378 0.82 +0.9
2,508,123 + MPMX20_02378 0.82 +0.4
2,508,125 - MPMX20_02378 0.83 +0.0
2,508,132 - MPMX20_02378 0.83 +0.7
2,508,208 + MPMX20_02378 0.86 -1.8
2,508,264 + MPMX20_02378 0.88 +1.3
2,508,265 + MPMX20_02378 0.88 +1.6
2,508,265 + MPMX20_02378 0.88 -1.0
2,508,273 - MPMX20_02378 0.89 +0.3
2,508,419 + +1.0
2,508,500 + +1.1
2,508,611 - -1.0
2,508,634 - -0.9
2,508,719 + MPMX20_02379 0.21 -0.2
2,508,727 - MPMX20_02379 0.23 -0.1
2,508,727 - MPMX20_02379 0.23 -0.5
2,508,727 - MPMX20_02379 0.23 +1.1
2,508,729 - MPMX20_02379 0.23 +3.8
2,508,845 + MPMX20_02379 0.43 -1.0
2,508,845 + MPMX20_02379 0.43 +0.5
2,508,845 + MPMX20_02379 0.43 -0.5
2,508,845 + MPMX20_02379 0.43 -1.8
2,508,853 - MPMX20_02379 0.44 +2.4
2,508,872 - MPMX20_02379 0.47 -0.3
2,508,888 - MPMX20_02379 0.50 -1.3
2,508,994 + MPMX20_02379 0.68 +1.4
2,508,994 - MPMX20_02379 0.68 +1.6
2,508,994 - MPMX20_02379 0.68 +3.0
2,509,007 + MPMX20_02379 0.70 +0.9
2,509,015 - MPMX20_02379 0.72 +2.4
2,509,024 - MPMX20_02379 0.73 +0.0
2,509,030 + MPMX20_02379 0.74 +0.8
2,509,035 + MPMX20_02379 0.75 +2.4
2,509,038 - MPMX20_02379 0.76 -0.8
2,509,038 - MPMX20_02379 0.76 +0.8
2,509,044 + MPMX20_02379 0.77 -1.3
2,509,052 - MPMX20_02379 0.78 -1.2
2,509,064 + MPMX20_02379 0.80 +1.1
2,509,134 - -0.8
2,509,224 + -1.2
2,509,362 - -1.0
2,509,400 + -0.1
2,509,400 + +0.8
2,509,419 - +0.6
2,509,431 - -1.6
2,509,453 - +1.1
2,509,453 - +0.5
2,509,461 + +1.0
2,509,463 - +0.1
2,509,479 + -0.6
2,509,491 + MPMX20_02380 0.10 -1.3
2,509,519 + MPMX20_02380 0.13 -0.6
2,509,519 + MPMX20_02380 0.13 -0.4
2,509,548 - MPMX20_02380 0.16 +0.5
2,509,615 + MPMX20_02380 0.24 -1.3
2,509,640 + MPMX20_02380 0.27 -3.6
2,509,645 + MPMX20_02380 0.28 -1.0
2,509,645 + MPMX20_02380 0.28 -2.0
2,509,653 - MPMX20_02380 0.28 +0.2
2,509,669 + MPMX20_02380 0.30 -0.1
2,509,707 + MPMX20_02380 0.35 -0.9
2,509,714 + MPMX20_02380 0.35 -0.8
2,509,715 - MPMX20_02380 0.35 +0.2
2,509,720 - MPMX20_02380 0.36 -0.1
2,509,720 - MPMX20_02380 0.36 +0.0
2,509,752 + MPMX20_02380 0.40 +1.2
2,509,752 + MPMX20_02380 0.40 -0.5
2,509,752 + MPMX20_02380 0.40 -1.0
2,509,758 + MPMX20_02380 0.40 +1.3
2,509,760 - MPMX20_02380 0.41 +1.4
2,509,769 + MPMX20_02380 0.42 +3.1
2,509,793 - MPMX20_02380 0.44 -0.9
2,509,811 - MPMX20_02380 0.46 +1.4
2,509,816 - MPMX20_02380 0.47 +1.8
2,509,820 + MPMX20_02380 0.47 +2.4
2,509,826 + MPMX20_02380 0.48 +0.6
2,509,826 + MPMX20_02380 0.48 -2.0
2,509,835 - MPMX20_02380 0.49 -1.2
2,509,835 - MPMX20_02380 0.49 -0.9
2,509,875 + MPMX20_02380 0.54 +0.1
2,509,881 - MPMX20_02380 0.54 +2.7
2,509,898 + MPMX20_02380 0.56 -0.4
2,509,913 + MPMX20_02380 0.58 -0.8
2,509,921 - MPMX20_02380 0.59 +0.8
2,509,923 - MPMX20_02380 0.59 -0.4
2,509,923 - MPMX20_02380 0.59 +0.2
2,509,956 + MPMX20_02380 0.63 +0.8
2,510,009 - MPMX20_02380 0.69 -0.6
2,510,030 + MPMX20_02380 0.71 -0.2
2,510,030 + MPMX20_02380 0.71 +0.7
2,510,037 + MPMX20_02380 0.72 -0.2
2,510,037 + MPMX20_02380 0.72 -0.2
2,510,049 + MPMX20_02380 0.73 -0.2
2,510,060 + MPMX20_02380 0.75 +0.3
2,510,068 - MPMX20_02380 0.76 -0.2
2,510,070 + MPMX20_02380 0.76 -0.2
2,510,075 + MPMX20_02380 0.76 +1.3
2,510,081 + MPMX20_02380 0.77 +0.2
2,510,083 - MPMX20_02380 0.77 +0.8
2,510,106 + MPMX20_02380 0.80 -0.8
2,510,114 + MPMX20_02380 0.81 +0.4
2,510,125 + MPMX20_02380 0.82 +2.4
2,510,125 + MPMX20_02380 0.82 -3.3
2,510,133 - MPMX20_02380 0.83 -0.8
2,510,141 + MPMX20_02380 0.84 +1.8
2,510,142 - MPMX20_02380 0.84 +2.0
2,510,157 + MPMX20_02380 0.86 -2.5
2,510,159 + MPMX20_02380 0.86 +0.4
2,510,159 + MPMX20_02380 0.86 -0.3
2,510,159 + MPMX20_02380 0.86 -2.0
2,510,159 + MPMX20_02380 0.86 -1.4
2,510,159 + MPMX20_02380 0.86 +0.4
2,510,159 + MPMX20_02380 0.86 -0.1
2,510,159 + MPMX20_02380 0.86 -1.2
2,510,159 + MPMX20_02380 0.86 +0.9
2,510,159 + MPMX20_02380 0.86 +0.5
2,510,159 + MPMX20_02380 0.86 -0.6
2,510,159 + MPMX20_02380 0.86 +0.8
2,510,159 + MPMX20_02380 0.86 -1.6
2,510,159 + MPMX20_02380 0.86 -0.5
2,510,159 + MPMX20_02380 0.86 -0.2
2,510,159 + MPMX20_02380 0.86 -1.4
2,510,159 + MPMX20_02380 0.86 +0.4
2,510,159 + MPMX20_02380 0.86 -0.7
2,510,159 + MPMX20_02380 0.86 +0.1
2,510,159 + MPMX20_02380 0.86 +0.2
2,510,159 + MPMX20_02380 0.86 -1.4
2,510,159 + MPMX20_02380 0.86 +0.1
2,510,159 + MPMX20_02380 0.86 -2.2
2,510,159 + MPMX20_02380 0.86 +1.2
2,510,159 + MPMX20_02380 0.86 -0.2
2,510,159 + MPMX20_02380 0.86 -0.0
2,510,159 + MPMX20_02380 0.86 -1.1
2,510,160 - MPMX20_02380 0.86 -1.4
2,510,162 + MPMX20_02380 0.86 -2.3
2,510,164 + MPMX20_02380 0.87 -0.7
2,510,164 + MPMX20_02380 0.87 +0.2
2,510,164 + MPMX20_02380 0.87 -0.6
2,510,164 + MPMX20_02380 0.87 +1.0
2,510,167 - MPMX20_02380 0.87 -1.1
2,510,167 - MPMX20_02380 0.87 +0.2
2,510,167 - MPMX20_02380 0.87 +0.2
2,510,167 - MPMX20_02380 0.87 +0.7
2,510,167 - MPMX20_02380 0.87 -0.5
2,510,167 - MPMX20_02380 0.87 +0.1
2,510,167 - MPMX20_02380 0.87 -1.1
2,510,167 - MPMX20_02380 0.87 +0.6
2,510,167 - MPMX20_02380 0.87 -0.8
2,510,169 + MPMX20_02380 0.87 -1.0
2,510,169 + MPMX20_02380 0.87 -0.0
2,510,169 + MPMX20_02380 0.87 +0.0
2,510,169 + MPMX20_02380 0.87 -2.0
2,510,169 + MPMX20_02380 0.87 +0.5
2,510,169 + MPMX20_02380 0.87 +0.7
2,510,169 + MPMX20_02380 0.87 +0.3
2,510,175 - MPMX20_02380 0.88 -0.3
2,510,177 - MPMX20_02380 0.88 -2.9
2,510,177 - MPMX20_02380 0.88 -0.6

Or see this region's nucleotide sequence