Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03436

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03434 and MPMX20_03435 overlap by 1 nucleotidesMPMX20_03435 and MPMX20_03436 are separated by 77 nucleotidesMPMX20_03436 and MPMX20_03437 are separated by 71 nucleotidesMPMX20_03437 and MPMX20_03438 overlap by 4 nucleotides MPMX20_03434: MPMX20_03434 - Holo-[acyl-carrier-protein] synthase, at 3,622,338 to 3,622,718 _03434 MPMX20_03435: MPMX20_03435 - Pyridoxine 5'-phosphate synthase, at 3,622,718 to 3,623,449 _03435 MPMX20_03436: MPMX20_03436 - DNA repair protein RecO, at 3,623,527 to 3,624,174 _03436 MPMX20_03437: MPMX20_03437 - GTPase Era, at 3,624,246 to 3,625,151 _03437 MPMX20_03438: MPMX20_03438 - Ribonuclease 3, at 3,625,148 to 3,625,867 _03438 Position (kb) 3623 3624 3625Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 3623.030 kb on - strand, within MPMX20_03435at 3623.030 kb on - strand, within MPMX20_03435at 3623.030 kb on - strand, within MPMX20_03435at 3623.030 kb on - strand, within MPMX20_03435at 3623.384 kb on - strandat 3623.516 kb on + strandat 3623.574 kb on - strandat 3623.586 kb on + strandat 3623.662 kb on - strand, within MPMX20_03436at 3623.673 kb on + strand, within MPMX20_03436at 3623.673 kb on + strand, within MPMX20_03436at 3623.674 kb on - strand, within MPMX20_03436at 3623.741 kb on + strand, within MPMX20_03436at 3623.757 kb on + strand, within MPMX20_03436at 3623.765 kb on - strand, within MPMX20_03436at 3623.880 kb on + strand, within MPMX20_03436at 3623.888 kb on - strand, within MPMX20_03436at 3623.888 kb on - strand, within MPMX20_03436at 3623.942 kb on + strand, within MPMX20_03436at 3623.969 kb on + strand, within MPMX20_03436at 3623.969 kb on + strand, within MPMX20_03436at 3623.969 kb on + strand, within MPMX20_03436at 3623.969 kb on + strand, within MPMX20_03436at 3623.969 kb on - strand, within MPMX20_03436at 3623.977 kb on - strand, within MPMX20_03436at 3623.977 kb on - strand, within MPMX20_03436at 3624.033 kb on - strand, within MPMX20_03436at 3624.040 kb on - strand, within MPMX20_03436at 3624.145 kb on + strandat 3624.171 kb on + strandat 3624.171 kb on + strandat 3624.171 kb on + strandat 3624.171 kb on + strandat 3624.179 kb on - strandat 3624.179 kb on - strandat 3624.197 kb on + strandat 3624.215 kb on - strandat 3624.215 kb on - strandat 3624.271 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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3,623,030 - MPMX20_03435 0.43 -0.4
3,623,030 - MPMX20_03435 0.43 +0.3
3,623,030 - MPMX20_03435 0.43 -0.9
3,623,030 - MPMX20_03435 0.43 -0.1
3,623,384 - +2.0
3,623,516 + +1.1
3,623,574 - -0.2
3,623,586 + -0.2
3,623,662 - MPMX20_03436 0.21 -0.4
3,623,673 + MPMX20_03436 0.23 -1.4
3,623,673 + MPMX20_03436 0.23 +0.1
3,623,674 - MPMX20_03436 0.23 +0.8
3,623,741 + MPMX20_03436 0.33 -1.6
3,623,757 + MPMX20_03436 0.35 -0.5
3,623,765 - MPMX20_03436 0.37 -0.4
3,623,880 + MPMX20_03436 0.54 +1.4
3,623,888 - MPMX20_03436 0.56 +2.0
3,623,888 - MPMX20_03436 0.56 -1.7
3,623,942 + MPMX20_03436 0.64 +0.6
3,623,969 + MPMX20_03436 0.68 +0.1
3,623,969 + MPMX20_03436 0.68 +0.0
3,623,969 + MPMX20_03436 0.68 +1.4
3,623,969 + MPMX20_03436 0.68 +0.6
3,623,969 - MPMX20_03436 0.68 +4.8
3,623,977 - MPMX20_03436 0.69 +1.1
3,623,977 - MPMX20_03436 0.69 -2.3
3,624,033 - MPMX20_03436 0.78 -1.0
3,624,040 - MPMX20_03436 0.79 -1.5
3,624,145 + +0.6
3,624,171 + +0.0
3,624,171 + +0.6
3,624,171 + +0.3
3,624,171 + +2.1
3,624,179 - -1.2
3,624,179 - +0.5
3,624,197 + -1.5
3,624,215 - +0.6
3,624,215 - +0.6
3,624,271 - +1.0

Or see this region's nucleotide sequence