Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03314 and MPMX20_03315 overlap by 11 nucleotides MPMX20_03315 and MPMX20_03316 overlap by 1 nucleotides MPMX20_03316 and MPMX20_03317 overlap by 1 nucleotides
MPMX20_03314: MPMX20_03314 - Sulfate/thiosulfate import ATP-binding protein CysA, at 3,482,943 to 3,484,037
_03314
MPMX20_03315: MPMX20_03315 - Sulfate transport system permease protein CysW, at 3,484,027 to 3,484,902
_03315
MPMX20_03316: MPMX20_03316 - Sulfate transport system permease protein CysT, at 3,484,902 to 3,485,735
_03316
MPMX20_03317: MPMX20_03317 - Thiosulfate-binding protein, at 3,485,735 to 3,486,748
_03317
Position (kb)
3484
3485
3486 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 3483.994 kb on - strand at 3484.043 kb on + strand at 3484.079 kb on - strand at 3484.084 kb on + strand at 3484.086 kb on + strand at 3484.162 kb on + strand, within MPMX20_03315 at 3484.163 kb on + strand, within MPMX20_03315 at 3484.181 kb on + strand, within MPMX20_03315 at 3484.273 kb on + strand, within MPMX20_03315 at 3484.273 kb on + strand, within MPMX20_03315 at 3484.281 kb on - strand, within MPMX20_03315 at 3484.281 kb on - strand, within MPMX20_03315 at 3484.286 kb on + strand, within MPMX20_03315 at 3484.286 kb on + strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.294 kb on - strand, within MPMX20_03315 at 3484.384 kb on + strand, within MPMX20_03315 at 3484.400 kb on + strand, within MPMX20_03315 at 3484.493 kb on - strand, within MPMX20_03315 at 3484.599 kb on - strand, within MPMX20_03315 at 3484.639 kb on + strand, within MPMX20_03315 at 3484.748 kb on + strand, within MPMX20_03315 at 3484.768 kb on + strand, within MPMX20_03315 at 3484.824 kb on + strand at 3484.824 kb on + strand at 3484.832 kb on - strand at 3484.999 kb on - strand, within MPMX20_03316 at 3485.029 kb on - strand, within MPMX20_03316 at 3485.081 kb on - strand, within MPMX20_03316 at 3485.103 kb on - strand, within MPMX20_03316 at 3485.181 kb on - strand, within MPMX20_03316 at 3485.319 kb on + strand, within MPMX20_03316 at 3485.368 kb on - strand, within MPMX20_03316 at 3485.484 kb on + strand, within MPMX20_03316 at 3485.485 kb on - strand, within MPMX20_03316 at 3485.501 kb on + strand, within MPMX20_03316 at 3485.502 kb on + strand, within MPMX20_03316 at 3485.588 kb on + strand, within MPMX20_03316 at 3485.590 kb on + strand, within MPMX20_03316 at 3485.590 kb on + strand, within MPMX20_03316 at 3485.590 kb on + strand, within MPMX20_03316 at 3485.590 kb on + strand, within MPMX20_03316 at 3485.590 kb on + strand, within MPMX20_03316 at 3485.598 kb on - strand, within MPMX20_03316 at 3485.598 kb on - strand, within MPMX20_03316 at 3485.598 kb on - strand, within MPMX20_03316 at 3485.670 kb on + strand at 3485.695 kb on - strand at 3485.696 kb on - strand at 3485.696 kb on - strand at 3485.696 kb on - strand at 3485.714 kb on + strand at 3485.800 kb on + strand at 3485.808 kb on - strand at 3485.878 kb on - strand, within MPMX20_03317 at 3485.926 kb on + strand, within MPMX20_03317 at 3485.934 kb on - strand, within MPMX20_03317 at 3485.939 kb on - strand, within MPMX20_03317 at 3486.009 kb on + strand, within MPMX20_03317 at 3486.009 kb on + strand, within MPMX20_03317 at 3486.034 kb on - strand, within MPMX20_03317 at 3486.057 kb on - strand, within MPMX20_03317 at 3486.065 kb on + strand, within MPMX20_03317 at 3486.073 kb on - strand, within MPMX20_03317 at 3486.097 kb on + strand, within MPMX20_03317 at 3486.105 kb on - strand, within MPMX20_03317 at 3486.105 kb on - strand, within MPMX20_03317 at 3486.105 kb on - strand, within MPMX20_03317 at 3486.141 kb on - strand, within MPMX20_03317 at 3486.198 kb on + strand, within MPMX20_03317 at 3486.198 kb on + strand, within MPMX20_03317 at 3486.206 kb on - strand, within MPMX20_03317 at 3486.206 kb on - strand, within MPMX20_03317 at 3486.213 kb on + strand, within MPMX20_03317 at 3486.245 kb on - strand, within MPMX20_03317 at 3486.265 kb on + strand, within MPMX20_03317 at 3486.319 kb on + strand, within MPMX20_03317 at 3486.329 kb on + strand, within MPMX20_03317 at 3486.337 kb on - strand, within MPMX20_03317 at 3486.384 kb on - strand, within MPMX20_03317 at 3486.384 kb on - strand, within MPMX20_03317 at 3486.476 kb on - strand, within MPMX20_03317 at 3486.477 kb on + strand, within MPMX20_03317 at 3486.487 kb on + strand, within MPMX20_03317 at 3486.495 kb on - strand, within MPMX20_03317 at 3486.495 kb on - strand, within MPMX20_03317 at 3486.532 kb on + strand, within MPMX20_03317 at 3486.570 kb on - strand, within MPMX20_03317 at 3486.605 kb on - strand, within MPMX20_03317 at 3486.610 kb on - strand, within MPMX20_03317 at 3486.620 kb on + strand, within MPMX20_03317 at 3486.626 kb on - strand, within MPMX20_03317 at 3486.662 kb on + strand at 3486.678 kb on + strand at 3486.686 kb on - strand at 3486.686 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 remove 3,483,994 - +0.7 3,484,043 + -0.0 3,484,079 - -0.9 3,484,084 + -0.3 3,484,086 + -0.0 3,484,162 + MPMX20_03315 0.15 -0.9 3,484,163 + MPMX20_03315 0.16 -0.9 3,484,181 + MPMX20_03315 0.18 +0.7 3,484,273 + MPMX20_03315 0.28 +2.2 3,484,273 + MPMX20_03315 0.28 +2.3 3,484,281 - MPMX20_03315 0.29 -0.7 3,484,281 - MPMX20_03315 0.29 +9.8 3,484,286 + MPMX20_03315 0.30 +2.7 3,484,286 + MPMX20_03315 0.30 -0.9 3,484,294 - MPMX20_03315 0.30 -0.7 3,484,294 - MPMX20_03315 0.30 -0.9 3,484,294 - MPMX20_03315 0.30 -0.3 3,484,384 + MPMX20_03315 0.41 -1.9 3,484,400 + MPMX20_03315 0.43 +1.7 3,484,493 - MPMX20_03315 0.53 -1.0 3,484,599 - MPMX20_03315 0.65 +0.9 3,484,639 + MPMX20_03315 0.70 -0.3 3,484,748 + MPMX20_03315 0.82 +1.7 3,484,768 + MPMX20_03315 0.85 +0.2 3,484,824 + +0.1 3,484,824 + -0.3 3,484,832 - -2.1 3,484,999 - MPMX20_03316 0.12 +1.7 3,485,029 - MPMX20_03316 0.15 +1.4 3,485,081 - MPMX20_03316 0.21 +0.8 3,485,103 - MPMX20_03316 0.24 -1.8 3,485,181 - MPMX20_03316 0.33 +1.1 3,485,319 + MPMX20_03316 0.50 +0.6 3,485,368 - MPMX20_03316 0.56 +0.4 3,485,484 + MPMX20_03316 0.70 +0.1 3,485,485 - MPMX20_03316 0.70 -1.9 3,485,501 + MPMX20_03316 0.72 +6.9 3,485,502 + MPMX20_03316 0.72 -0.4 3,485,588 + MPMX20_03316 0.82 +0.1 3,485,590 + MPMX20_03316 0.82 +1.2 3,485,590 + MPMX20_03316 0.82 -1.9 3,485,590 + MPMX20_03316 0.82 +0.6 3,485,590 + MPMX20_03316 0.82 +0.1 3,485,590 + MPMX20_03316 0.82 -1.2 3,485,598 - MPMX20_03316 0.83 -0.5 3,485,598 - MPMX20_03316 0.83 +0.1 3,485,598 - MPMX20_03316 0.83 -1.4 3,485,670 + -0.5 3,485,695 - -1.4 3,485,696 - -0.9 3,485,696 - -0.6 3,485,696 - +2.7 3,485,714 + +0.8 3,485,800 + -0.8 3,485,808 - +1.5 3,485,878 - MPMX20_03317 0.14 -1.3 3,485,926 + MPMX20_03317 0.19 -0.7 3,485,934 - MPMX20_03317 0.20 -0.5 3,485,939 - MPMX20_03317 0.20 -0.3 3,486,009 + MPMX20_03317 0.27 -0.6 3,486,009 + MPMX20_03317 0.27 -0.5 3,486,034 - MPMX20_03317 0.29 +0.0 3,486,057 - MPMX20_03317 0.32 -1.8 3,486,065 + MPMX20_03317 0.33 +0.4 3,486,073 - MPMX20_03317 0.33 -0.4 3,486,097 + MPMX20_03317 0.36 -2.2 3,486,105 - MPMX20_03317 0.36 -0.8 3,486,105 - MPMX20_03317 0.36 +0.7 3,486,105 - MPMX20_03317 0.36 -0.6 3,486,141 - MPMX20_03317 0.40 +0.1 3,486,198 + MPMX20_03317 0.46 -1.7 3,486,198 + MPMX20_03317 0.46 -0.9 3,486,206 - MPMX20_03317 0.46 +0.7 3,486,206 - MPMX20_03317 0.46 -1.8 3,486,213 + MPMX20_03317 0.47 -0.5 3,486,245 - MPMX20_03317 0.50 -1.0 3,486,265 + MPMX20_03317 0.52 +0.1 3,486,319 + MPMX20_03317 0.58 -0.8 3,486,329 + MPMX20_03317 0.59 -0.6 3,486,337 - MPMX20_03317 0.59 -0.1 3,486,384 - MPMX20_03317 0.64 +1.2 3,486,384 - MPMX20_03317 0.64 +0.4 3,486,476 - MPMX20_03317 0.73 +1.0 3,486,477 + MPMX20_03317 0.73 -2.6 3,486,487 + MPMX20_03317 0.74 -0.1 3,486,495 - MPMX20_03317 0.75 +0.1 3,486,495 - MPMX20_03317 0.75 -0.1 3,486,532 + MPMX20_03317 0.79 -0.9 3,486,570 - MPMX20_03317 0.82 +0.1 3,486,605 - MPMX20_03317 0.86 +0.4 3,486,610 - MPMX20_03317 0.86 -0.9 3,486,620 + MPMX20_03317 0.87 +0.7 3,486,626 - MPMX20_03317 0.88 -1.9 3,486,662 + -1.1 3,486,678 + +1.7 3,486,686 - -0.6 3,486,686 - -0.9
Or see this region's nucleotide sequence