Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03229

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03227 and MPMX20_03228 are separated by 44 nucleotidesMPMX20_03228 and MPMX20_03229 overlap by 8 nucleotidesMPMX20_03229 and MPMX20_03230 overlap by 4 nucleotides MPMX20_03227: MPMX20_03227 - Phosphate acetyltransferase, at 3,399,730 to 3,401,871 _03227 MPMX20_03228: MPMX20_03228 - Apulose-4-phosphate transketolase subunit B, at 3,401,916 to 3,402,869 _03228 MPMX20_03229: MPMX20_03229 - Apulose-4-phosphate transketolase subunit A, at 3,402,862 to 3,403,692 _03229 MPMX20_03230: MPMX20_03230 - Ascorbate-specific PTS system EIIC component, at 3,403,689 to 3,405,080 _03230 Position (kb) 3402 3403 3404Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9at 3401.866 kb on + strandat 3401.875 kb on - strandat 3401.883 kb on + strandat 3401.989 kb on + strandat 3401.997 kb on - strandat 3401.997 kb on - strandat 3401.997 kb on - strandat 3402.009 kb on - strandat 3402.011 kb on + strandat 3402.011 kb on + strandat 3402.019 kb on - strand, within MPMX20_03228at 3402.035 kb on + strand, within MPMX20_03228at 3402.045 kb on + strand, within MPMX20_03228at 3402.045 kb on + strand, within MPMX20_03228at 3402.056 kb on + strand, within MPMX20_03228at 3402.078 kb on - strand, within MPMX20_03228at 3402.108 kb on + strand, within MPMX20_03228at 3402.164 kb on + strand, within MPMX20_03228at 3402.164 kb on + strand, within MPMX20_03228at 3402.207 kb on - strand, within MPMX20_03228at 3402.253 kb on - strand, within MPMX20_03228at 3402.308 kb on + strand, within MPMX20_03228at 3402.337 kb on + strand, within MPMX20_03228at 3402.345 kb on - strand, within MPMX20_03228at 3402.377 kb on - strand, within MPMX20_03228at 3402.391 kb on + strand, within MPMX20_03228at 3402.440 kb on - strand, within MPMX20_03228at 3402.458 kb on - strand, within MPMX20_03228at 3402.485 kb on + strand, within MPMX20_03228at 3402.539 kb on + strand, within MPMX20_03228at 3402.547 kb on + strand, within MPMX20_03228at 3402.570 kb on + strand, within MPMX20_03228at 3402.589 kb on - strand, within MPMX20_03228at 3402.615 kb on + strand, within MPMX20_03228at 3402.629 kb on + strand, within MPMX20_03228at 3402.737 kb on + strand, within MPMX20_03228at 3402.737 kb on + strand, within MPMX20_03228at 3402.752 kb on + strand, within MPMX20_03228at 3402.755 kb on - strand, within MPMX20_03228at 3402.755 kb on - strand, within MPMX20_03228at 3402.799 kb on + strandat 3402.833 kb on - strandat 3402.840 kb on + strandat 3402.848 kb on - strandat 3402.908 kb on + strandat 3402.996 kb on - strand, within MPMX20_03229at 3403.067 kb on + strand, within MPMX20_03229at 3403.091 kb on - strand, within MPMX20_03229at 3403.137 kb on - strand, within MPMX20_03229at 3403.206 kb on + strand, within MPMX20_03229at 3403.226 kb on + strand, within MPMX20_03229at 3403.226 kb on + strand, within MPMX20_03229at 3403.231 kb on + strand, within MPMX20_03229at 3403.232 kb on - strand, within MPMX20_03229at 3403.236 kb on + strand, within MPMX20_03229at 3403.296 kb on + strand, within MPMX20_03229at 3403.359 kb on + strand, within MPMX20_03229at 3403.359 kb on + strand, within MPMX20_03229at 3403.359 kb on + strand, within MPMX20_03229at 3403.367 kb on - strand, within MPMX20_03229at 3403.424 kb on - strand, within MPMX20_03229at 3403.466 kb on + strand, within MPMX20_03229at 3403.466 kb on + strand, within MPMX20_03229at 3403.466 kb on + strand, within MPMX20_03229at 3403.466 kb on + strand, within MPMX20_03229at 3403.474 kb on - strand, within MPMX20_03229at 3403.474 kb on - strand, within MPMX20_03229at 3403.474 kb on - strand, within MPMX20_03229at 3403.474 kb on - strand, within MPMX20_03229at 3403.474 kb on - strand, within MPMX20_03229at 3403.518 kb on + strand, within MPMX20_03229at 3403.523 kb on + strand, within MPMX20_03229at 3403.523 kb on + strand, within MPMX20_03229at 3403.526 kb on - strand, within MPMX20_03229at 3403.564 kb on + strand, within MPMX20_03229at 3403.624 kb on - strandat 3403.699 kb on + strandat 3403.752 kb on + strandat 3403.784 kb on + strandat 3403.833 kb on - strand, within MPMX20_03230at 3403.839 kb on + strand, within MPMX20_03230at 3403.865 kb on - strand, within MPMX20_03230at 3403.938 kb on - strand, within MPMX20_03230at 3404.033 kb on - strand, within MPMX20_03230at 3404.071 kb on + strand, within MPMX20_03230at 3404.071 kb on + strand, within MPMX20_03230at 3404.079 kb on - strand, within MPMX20_03230at 3404.091 kb on - strand, within MPMX20_03230at 3404.158 kb on - strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.160 kb on + strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.168 kb on - strand, within MPMX20_03230at 3404.213 kb on - strand, within MPMX20_03230at 3404.232 kb on + strand, within MPMX20_03230at 3404.277 kb on + strand, within MPMX20_03230at 3404.284 kb on + strand, within MPMX20_03230at 3404.300 kb on + strand, within MPMX20_03230at 3404.310 kb on + strand, within MPMX20_03230at 3404.313 kb on - strand, within MPMX20_03230at 3404.322 kb on + strand, within MPMX20_03230at 3404.328 kb on - strand, within MPMX20_03230at 3404.333 kb on + strand, within MPMX20_03230at 3404.353 kb on + strand, within MPMX20_03230at 3404.375 kb on - strand, within MPMX20_03230at 3404.402 kb on + strand, within MPMX20_03230at 3404.402 kb on + strand, within MPMX20_03230at 3404.410 kb on - strand, within MPMX20_03230at 3404.432 kb on - strand, within MPMX20_03230at 3404.432 kb on - strand, within MPMX20_03230at 3404.467 kb on - strand, within MPMX20_03230at 3404.480 kb on - strand, within MPMX20_03230at 3404.523 kb on - strand, within MPMX20_03230at 3404.523 kb on - strand, within MPMX20_03230at 3404.523 kb on - strand, within MPMX20_03230at 3404.523 kb on - strand, within MPMX20_03230at 3404.523 kb on - strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.563 kb on + strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.571 kb on - strand, within MPMX20_03230at 3404.609 kb on + strand, within MPMX20_03230at 3404.623 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.628 kb on + strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.636 kb on - strand, within MPMX20_03230at 3404.641 kb on + strand, within MPMX20_03230at 3404.641 kb on + strand, within MPMX20_03230at 3404.657 kb on + strand, within MPMX20_03230at 3404.659 kb on + strand, within MPMX20_03230at 3404.661 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.663 kb on + strand, within MPMX20_03230at 3404.665 kb on - strand, within MPMX20_03230at 3404.669 kb on + strand, within MPMX20_03230at 3404.669 kb on - strand, within MPMX20_03230at 3404.671 kb on - strand, within MPMX20_03230at 3404.671 kb on - strand, within MPMX20_03230at 3404.671 kb on - strand, within MPMX20_03230at 3404.671 kb on - strand, within MPMX20_03230at 3404.672 kb on + strand, within MPMX20_03230at 3404.674 kb on + strand, within MPMX20_03230at 3404.676 kb on + strand, within MPMX20_03230at 3404.687 kb on + strand, within MPMX20_03230at 3404.688 kb on + strand, within MPMX20_03230

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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3,401,866 + -0.2
3,401,875 - +0.1
3,401,883 + +4.2
3,401,989 + -0.2
3,401,997 - +1.2
3,401,997 - +1.6
3,401,997 - -0.8
3,402,009 - -0.4
3,402,011 + -0.3
3,402,011 + +1.1
3,402,019 - MPMX20_03228 0.11 +0.6
3,402,035 + MPMX20_03228 0.12 -0.4
3,402,045 + MPMX20_03228 0.14 -1.9
3,402,045 + MPMX20_03228 0.14 -0.8
3,402,056 + MPMX20_03228 0.15 -0.2
3,402,078 - MPMX20_03228 0.17 -0.3
3,402,108 + MPMX20_03228 0.20 +0.3
3,402,164 + MPMX20_03228 0.26 +0.5
3,402,164 + MPMX20_03228 0.26 +1.0
3,402,207 - MPMX20_03228 0.31 +3.6
3,402,253 - MPMX20_03228 0.35 +2.2
3,402,308 + MPMX20_03228 0.41 -1.0
3,402,337 + MPMX20_03228 0.44 -0.2
3,402,345 - MPMX20_03228 0.45 +0.8
3,402,377 - MPMX20_03228 0.48 +1.2
3,402,391 + MPMX20_03228 0.50 +0.1
3,402,440 - MPMX20_03228 0.55 +1.5
3,402,458 - MPMX20_03228 0.57 +1.6
3,402,485 + MPMX20_03228 0.60 -0.4
3,402,539 + MPMX20_03228 0.65 +0.1
3,402,547 + MPMX20_03228 0.66 +0.8
3,402,570 + MPMX20_03228 0.69 -0.6
3,402,589 - MPMX20_03228 0.71 -0.9
3,402,615 + MPMX20_03228 0.73 -0.1
3,402,629 + MPMX20_03228 0.75 +0.4
3,402,737 + MPMX20_03228 0.86 +0.2
3,402,737 + MPMX20_03228 0.86 +0.2
3,402,752 + MPMX20_03228 0.88 +0.0
3,402,755 - MPMX20_03228 0.88 +0.1
3,402,755 - MPMX20_03228 0.88 +0.6
3,402,799 + -0.8
3,402,833 - -0.8
3,402,840 + -0.6
3,402,848 - -2.0
3,402,908 + +2.2
3,402,996 - MPMX20_03229 0.16 -0.6
3,403,067 + MPMX20_03229 0.25 -2.3
3,403,091 - MPMX20_03229 0.28 +4.2
3,403,137 - MPMX20_03229 0.33 +0.3
3,403,206 + MPMX20_03229 0.41 +0.6
3,403,226 + MPMX20_03229 0.44 -2.7
3,403,226 + MPMX20_03229 0.44 -1.7
3,403,231 + MPMX20_03229 0.44 -1.1
3,403,232 - MPMX20_03229 0.45 +0.0
3,403,236 + MPMX20_03229 0.45 -0.2
3,403,296 + MPMX20_03229 0.52 +0.3
3,403,359 + MPMX20_03229 0.60 -1.1
3,403,359 + MPMX20_03229 0.60 +0.1
3,403,359 + MPMX20_03229 0.60 -0.5
3,403,367 - MPMX20_03229 0.61 +0.4
3,403,424 - MPMX20_03229 0.68 -0.5
3,403,466 + MPMX20_03229 0.73 -0.2
3,403,466 + MPMX20_03229 0.73 -0.3
3,403,466 + MPMX20_03229 0.73 -0.5
3,403,466 + MPMX20_03229 0.73 +0.6
3,403,474 - MPMX20_03229 0.74 -2.4
3,403,474 - MPMX20_03229 0.74 -1.6
3,403,474 - MPMX20_03229 0.74 -0.3
3,403,474 - MPMX20_03229 0.74 +1.6
3,403,474 - MPMX20_03229 0.74 -0.5
3,403,518 + MPMX20_03229 0.79 -0.2
3,403,523 + MPMX20_03229 0.80 +1.8
3,403,523 + MPMX20_03229 0.80 -1.4
3,403,526 - MPMX20_03229 0.80 +9.5
3,403,564 + MPMX20_03229 0.84 +2.6
3,403,624 - -0.2
3,403,699 + +1.1
3,403,752 + +2.5
3,403,784 + +0.8
3,403,833 - MPMX20_03230 0.10 +0.1
3,403,839 + MPMX20_03230 0.11 +0.1
3,403,865 - MPMX20_03230 0.13 -2.0
3,403,938 - MPMX20_03230 0.18 -0.7
3,404,033 - MPMX20_03230 0.25 +0.7
3,404,071 + MPMX20_03230 0.27 -0.8
3,404,071 + MPMX20_03230 0.27 +0.3
3,404,079 - MPMX20_03230 0.28 -2.0
3,404,091 - MPMX20_03230 0.29 -1.1
3,404,158 - MPMX20_03230 0.34 +1.6
3,404,160 + MPMX20_03230 0.34 +0.3
3,404,160 + MPMX20_03230 0.34 +2.1
3,404,160 + MPMX20_03230 0.34 -1.1
3,404,160 + MPMX20_03230 0.34 +0.7
3,404,160 + MPMX20_03230 0.34 -3.0
3,404,160 + MPMX20_03230 0.34 -0.2
3,404,160 + MPMX20_03230 0.34 -1.4
3,404,160 + MPMX20_03230 0.34 -1.6
3,404,160 + MPMX20_03230 0.34 -1.2
3,404,160 + MPMX20_03230 0.34 +1.5
3,404,160 + MPMX20_03230 0.34 -1.9
3,404,168 - MPMX20_03230 0.34 +0.3
3,404,168 - MPMX20_03230 0.34 -0.1
3,404,168 - MPMX20_03230 0.34 +0.8
3,404,168 - MPMX20_03230 0.34 +1.1
3,404,168 - MPMX20_03230 0.34 +0.7
3,404,168 - MPMX20_03230 0.34 +0.4
3,404,168 - MPMX20_03230 0.34 +0.4
3,404,168 - MPMX20_03230 0.34 +0.5
3,404,168 - MPMX20_03230 0.34 -0.3
3,404,168 - MPMX20_03230 0.34 -0.5
3,404,213 - MPMX20_03230 0.38 -0.5
3,404,232 + MPMX20_03230 0.39 +0.5
3,404,277 + MPMX20_03230 0.42 +0.3
3,404,284 + MPMX20_03230 0.43 +0.4
3,404,300 + MPMX20_03230 0.44 +0.8
3,404,310 + MPMX20_03230 0.45 -0.6
3,404,313 - MPMX20_03230 0.45 -2.3
3,404,322 + MPMX20_03230 0.45 +1.1
3,404,328 - MPMX20_03230 0.46 -0.7
3,404,333 + MPMX20_03230 0.46 -0.9
3,404,353 + MPMX20_03230 0.48 -1.2
3,404,375 - MPMX20_03230 0.49 +0.6
3,404,402 + MPMX20_03230 0.51 +0.6
3,404,402 + MPMX20_03230 0.51 -0.4
3,404,410 - MPMX20_03230 0.52 -0.3
3,404,432 - MPMX20_03230 0.53 -0.2
3,404,432 - MPMX20_03230 0.53 -1.6
3,404,467 - MPMX20_03230 0.56 +0.2
3,404,480 - MPMX20_03230 0.57 +0.3
3,404,523 - MPMX20_03230 0.60 +0.1
3,404,523 - MPMX20_03230 0.60 +0.1
3,404,523 - MPMX20_03230 0.60 +1.6
3,404,523 - MPMX20_03230 0.60 +0.3
3,404,523 - MPMX20_03230 0.60 -1.4
3,404,563 + MPMX20_03230 0.63 -1.4
3,404,563 + MPMX20_03230 0.63 -0.4
3,404,563 + MPMX20_03230 0.63 -1.2
3,404,563 + MPMX20_03230 0.63 +0.1
3,404,563 + MPMX20_03230 0.63 -1.4
3,404,563 + MPMX20_03230 0.63 -1.6
3,404,563 + MPMX20_03230 0.63 +0.5
3,404,563 + MPMX20_03230 0.63 -1.0
3,404,571 - MPMX20_03230 0.63 -0.9
3,404,571 - MPMX20_03230 0.63 -1.4
3,404,571 - MPMX20_03230 0.63 -2.7
3,404,571 - MPMX20_03230 0.63 +0.5
3,404,571 - MPMX20_03230 0.63 -0.8
3,404,571 - MPMX20_03230 0.63 -0.5
3,404,609 + MPMX20_03230 0.66 -1.5
3,404,623 + MPMX20_03230 0.67 +0.1
3,404,628 + MPMX20_03230 0.67 -0.8
3,404,628 + MPMX20_03230 0.67 -0.5
3,404,628 + MPMX20_03230 0.67 +1.8
3,404,628 + MPMX20_03230 0.67 +0.8
3,404,628 + MPMX20_03230 0.67 +0.8
3,404,628 + MPMX20_03230 0.67 +2.1
3,404,628 + MPMX20_03230 0.67 +0.6
3,404,628 + MPMX20_03230 0.67 +0.1
3,404,628 + MPMX20_03230 0.67 -0.3
3,404,628 + MPMX20_03230 0.67 +1.3
3,404,628 + MPMX20_03230 0.67 -0.6
3,404,628 + MPMX20_03230 0.67 -0.1
3,404,628 + MPMX20_03230 0.67 +1.4
3,404,636 - MPMX20_03230 0.68 -1.4
3,404,636 - MPMX20_03230 0.68 +0.9
3,404,636 - MPMX20_03230 0.68 -0.4
3,404,636 - MPMX20_03230 0.68 +1.0
3,404,636 - MPMX20_03230 0.68 -0.1
3,404,636 - MPMX20_03230 0.68 -1.7
3,404,636 - MPMX20_03230 0.68 +0.9
3,404,641 + MPMX20_03230 0.68 +0.6
3,404,641 + MPMX20_03230 0.68 +1.1
3,404,657 + MPMX20_03230 0.70 -1.3
3,404,659 + MPMX20_03230 0.70 +0.3
3,404,661 + MPMX20_03230 0.70 +0.1
3,404,663 + MPMX20_03230 0.70 -0.7
3,404,663 + MPMX20_03230 0.70 -0.8
3,404,663 + MPMX20_03230 0.70 -1.6
3,404,663 + MPMX20_03230 0.70 -0.5
3,404,663 + MPMX20_03230 0.70 +0.1
3,404,663 + MPMX20_03230 0.70 -0.9
3,404,663 + MPMX20_03230 0.70 -0.2
3,404,663 + MPMX20_03230 0.70 -0.8
3,404,663 + MPMX20_03230 0.70 +0.2
3,404,663 + MPMX20_03230 0.70 -0.8
3,404,663 + MPMX20_03230 0.70 +0.5
3,404,663 + MPMX20_03230 0.70 +0.8
3,404,663 + MPMX20_03230 0.70 -1.4
3,404,665 - MPMX20_03230 0.70 -1.0
3,404,669 + MPMX20_03230 0.70 +0.1
3,404,669 - MPMX20_03230 0.70 -0.9
3,404,671 - MPMX20_03230 0.71 -0.4
3,404,671 - MPMX20_03230 0.71 -1.1
3,404,671 - MPMX20_03230 0.71 +0.6
3,404,671 - MPMX20_03230 0.71 +2.1
3,404,672 + MPMX20_03230 0.71 -2.0
3,404,674 + MPMX20_03230 0.71 -0.4
3,404,676 + MPMX20_03230 0.71 -0.8
3,404,687 + MPMX20_03230 0.72 -0.6
3,404,688 + MPMX20_03230 0.72 +0.6

Or see this region's nucleotide sequence