Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02975

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02974 and MPMX20_02975 overlap by 1 nucleotidesMPMX20_02975 and MPMX20_02976 overlap by 4 nucleotides MPMX20_02974: MPMX20_02974 - N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase, at 3,105,443 to 3,107,185 _02974 MPMX20_02975: MPMX20_02975 - N(6)-hydroxylysine O-acetyltransferase, at 3,107,185 to 3,108,132 _02975 MPMX20_02976: MPMX20_02976 - Aerobactin synthase, at 3,108,129 to 3,109,871 _02976 Position (kb) 3107 3108 3109Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 3106.307 kb on - strand, within MPMX20_02974at 3106.309 kb on + strand, within MPMX20_02974at 3106.309 kb on + strand, within MPMX20_02974at 3106.309 kb on + strand, within MPMX20_02974at 3106.372 kb on + strand, within MPMX20_02974at 3106.372 kb on + strand, within MPMX20_02974at 3106.372 kb on + strand, within MPMX20_02974at 3106.380 kb on - strand, within MPMX20_02974at 3106.410 kb on + strand, within MPMX20_02974at 3106.410 kb on + strand, within MPMX20_02974at 3106.430 kb on - strand, within MPMX20_02974at 3106.433 kb on + strand, within MPMX20_02974at 3106.443 kb on + strand, within MPMX20_02974at 3106.443 kb on + strand, within MPMX20_02974at 3106.443 kb on + strand, within MPMX20_02974at 3106.513 kb on - strand, within MPMX20_02974at 3106.539 kb on + strand, within MPMX20_02974at 3106.546 kb on + strand, within MPMX20_02974at 3106.569 kb on - strand, within MPMX20_02974at 3106.578 kb on - strand, within MPMX20_02974at 3106.661 kb on - strand, within MPMX20_02974at 3106.693 kb on + strand, within MPMX20_02974at 3106.804 kb on - strand, within MPMX20_02974at 3106.820 kb on - strand, within MPMX20_02974at 3106.928 kb on - strand, within MPMX20_02974at 3106.928 kb on - strand, within MPMX20_02974at 3106.958 kb on + strand, within MPMX20_02974at 3106.993 kb on - strand, within MPMX20_02974at 3106.998 kb on - strand, within MPMX20_02974at 3107.051 kb on + strandat 3107.066 kb on + strandat 3107.074 kb on - strandat 3107.276 kb on + strandat 3107.283 kb on + strand, within MPMX20_02975at 3107.289 kb on - strand, within MPMX20_02975at 3107.351 kb on + strand, within MPMX20_02975at 3107.376 kb on + strand, within MPMX20_02975at 3107.376 kb on + strand, within MPMX20_02975at 3107.376 kb on + strand, within MPMX20_02975at 3107.376 kb on + strand, within MPMX20_02975at 3107.376 kb on + strand, within MPMX20_02975at 3107.384 kb on - strand, within MPMX20_02975at 3107.384 kb on - strand, within MPMX20_02975at 3107.384 kb on - strand, within MPMX20_02975at 3107.416 kb on + strand, within MPMX20_02975at 3107.543 kb on - strand, within MPMX20_02975at 3107.583 kb on - strand, within MPMX20_02975at 3107.606 kb on - strand, within MPMX20_02975at 3107.658 kb on - strand, within MPMX20_02975at 3107.658 kb on - strand, within MPMX20_02975at 3107.756 kb on + strand, within MPMX20_02975at 3107.764 kb on - strand, within MPMX20_02975at 3107.777 kb on + strand, within MPMX20_02975at 3107.821 kb on + strand, within MPMX20_02975at 3108.013 kb on - strand, within MPMX20_02975at 3108.047 kb on + strandat 3108.085 kb on - strandat 3108.106 kb on + strandat 3108.127 kb on - strandat 3108.127 kb on - strandat 3108.129 kb on - strandat 3108.181 kb on - strandat 3108.266 kb on + strandat 3108.386 kb on - strand, within MPMX20_02976at 3108.491 kb on + strand, within MPMX20_02976at 3108.493 kb on + strand, within MPMX20_02976at 3108.576 kb on - strand, within MPMX20_02976at 3108.582 kb on + strand, within MPMX20_02976at 3108.591 kb on - strand, within MPMX20_02976at 3108.639 kb on - strand, within MPMX20_02976at 3108.651 kb on + strand, within MPMX20_02976at 3108.654 kb on - strand, within MPMX20_02976at 3108.657 kb on + strand, within MPMX20_02976at 3108.665 kb on - strand, within MPMX20_02976at 3108.665 kb on - strand, within MPMX20_02976at 3108.684 kb on + strand, within MPMX20_02976at 3108.718 kb on - strand, within MPMX20_02976at 3108.911 kb on + strand, within MPMX20_02976at 3108.998 kb on + strand, within MPMX20_02976at 3109.030 kb on + strand, within MPMX20_02976at 3109.038 kb on - strand, within MPMX20_02976at 3109.038 kb on - strand, within MPMX20_02976at 3109.038 kb on - strand, within MPMX20_02976at 3109.043 kb on - strand, within MPMX20_02976at 3109.080 kb on - strand, within MPMX20_02976at 3109.126 kb on + strand, within MPMX20_02976at 3109.129 kb on - strand, within MPMX20_02976

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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3,106,307 - MPMX20_02974 0.50 -0.7
3,106,309 + MPMX20_02974 0.50 +0.5
3,106,309 + MPMX20_02974 0.50 +1.2
3,106,309 + MPMX20_02974 0.50 +5.2
3,106,372 + MPMX20_02974 0.53 +0.7
3,106,372 + MPMX20_02974 0.53 -1.2
3,106,372 + MPMX20_02974 0.53 -1.8
3,106,380 - MPMX20_02974 0.54 -3.3
3,106,410 + MPMX20_02974 0.55 -0.3
3,106,410 + MPMX20_02974 0.55 -2.7
3,106,430 - MPMX20_02974 0.57 -0.1
3,106,433 + MPMX20_02974 0.57 -0.8
3,106,443 + MPMX20_02974 0.57 +0.8
3,106,443 + MPMX20_02974 0.57 -0.5
3,106,443 + MPMX20_02974 0.57 -2.0
3,106,513 - MPMX20_02974 0.61 -0.7
3,106,539 + MPMX20_02974 0.63 +0.3
3,106,546 + MPMX20_02974 0.63 +0.6
3,106,569 - MPMX20_02974 0.65 +1.7
3,106,578 - MPMX20_02974 0.65 -0.9
3,106,661 - MPMX20_02974 0.70 +2.5
3,106,693 + MPMX20_02974 0.72 +1.5
3,106,804 - MPMX20_02974 0.78 -0.9
3,106,820 - MPMX20_02974 0.79 -2.5
3,106,928 - MPMX20_02974 0.85 -0.4
3,106,928 - MPMX20_02974 0.85 -0.5
3,106,958 + MPMX20_02974 0.87 -0.1
3,106,993 - MPMX20_02974 0.89 -1.5
3,106,998 - MPMX20_02974 0.89 -1.4
3,107,051 + -0.8
3,107,066 + -0.0
3,107,074 - -1.5
3,107,276 + +1.1
3,107,283 + MPMX20_02975 0.10 -0.2
3,107,289 - MPMX20_02975 0.11 +0.3
3,107,351 + MPMX20_02975 0.18 -1.7
3,107,376 + MPMX20_02975 0.20 -0.4
3,107,376 + MPMX20_02975 0.20 +0.1
3,107,376 + MPMX20_02975 0.20 +0.6
3,107,376 + MPMX20_02975 0.20 -3.1
3,107,376 + MPMX20_02975 0.20 -1.0
3,107,384 - MPMX20_02975 0.21 -1.1
3,107,384 - MPMX20_02975 0.21 +1.9
3,107,384 - MPMX20_02975 0.21 -0.5
3,107,416 + MPMX20_02975 0.24 +0.1
3,107,543 - MPMX20_02975 0.38 -1.7
3,107,583 - MPMX20_02975 0.42 -1.6
3,107,606 - MPMX20_02975 0.44 -0.3
3,107,658 - MPMX20_02975 0.50 -0.5
3,107,658 - MPMX20_02975 0.50 +2.3
3,107,756 + MPMX20_02975 0.60 -2.2
3,107,764 - MPMX20_02975 0.61 -0.5
3,107,777 + MPMX20_02975 0.62 -1.5
3,107,821 + MPMX20_02975 0.67 -1.6
3,108,013 - MPMX20_02975 0.87 -2.6
3,108,047 + +0.5
3,108,085 - -0.9
3,108,106 + +0.2
3,108,127 - -0.1
3,108,127 - +0.2
3,108,129 - +0.1
3,108,181 - -0.9
3,108,266 + -0.4
3,108,386 - MPMX20_02976 0.15 -0.4
3,108,491 + MPMX20_02976 0.21 -1.1
3,108,493 + MPMX20_02976 0.21 -2.6
3,108,576 - MPMX20_02976 0.26 +0.2
3,108,582 + MPMX20_02976 0.26 -0.6
3,108,591 - MPMX20_02976 0.27 -1.8
3,108,639 - MPMX20_02976 0.29 -0.5
3,108,651 + MPMX20_02976 0.30 +2.1
3,108,654 - MPMX20_02976 0.30 -2.2
3,108,657 + MPMX20_02976 0.30 -0.2
3,108,665 - MPMX20_02976 0.31 -0.8
3,108,665 - MPMX20_02976 0.31 -0.5
3,108,684 + MPMX20_02976 0.32 +0.9
3,108,718 - MPMX20_02976 0.34 -0.4
3,108,911 + MPMX20_02976 0.45 -0.7
3,108,998 + MPMX20_02976 0.50 +2.3
3,109,030 + MPMX20_02976 0.52 +6.5
3,109,038 - MPMX20_02976 0.52 +0.1
3,109,038 - MPMX20_02976 0.52 -0.9
3,109,038 - MPMX20_02976 0.52 -0.9
3,109,043 - MPMX20_02976 0.52 -0.5
3,109,080 - MPMX20_02976 0.55 +0.3
3,109,126 + MPMX20_02976 0.57 -1.5
3,109,129 - MPMX20_02976 0.57 -1.0

Or see this region's nucleotide sequence