Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02792 and MPMX20_02793 overlap by 25 nucleotides MPMX20_02793 and MPMX20_02794 are separated by 16 nucleotides MPMX20_02794 and MPMX20_02795 are separated by 12 nucleotides
MPMX20_02792: MPMX20_02792 - hypothetical protein, at 2,948,602 to 2,950,986
_02792
MPMX20_02793: MPMX20_02793 - hypothetical protein, at 2,950,962 to 2,951,723
_02793
MPMX20_02794: MPMX20_02794 - hypothetical protein, at 2,951,740 to 2,952,288
_02794
MPMX20_02795: MPMX20_02795 - hypothetical protein, at 2,952,301 to 2,952,873
_02795
Position (kb)
2950
2951
2952 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 2950.019 kb on - strand, within MPMX20_02792 at 2950.055 kb on + strand, within MPMX20_02792 at 2950.058 kb on - strand, within MPMX20_02792 at 2950.077 kb on + strand, within MPMX20_02792 at 2950.077 kb on + strand, within MPMX20_02792 at 2950.082 kb on + strand, within MPMX20_02792 at 2950.087 kb on + strand, within MPMX20_02792 at 2950.095 kb on - strand, within MPMX20_02792 at 2950.217 kb on - strand, within MPMX20_02792 at 2950.228 kb on + strand, within MPMX20_02792 at 2950.233 kb on - strand, within MPMX20_02792 at 2950.315 kb on + strand, within MPMX20_02792 at 2950.320 kb on + strand, within MPMX20_02792 at 2950.371 kb on - strand, within MPMX20_02792 at 2950.383 kb on - strand, within MPMX20_02792 at 2950.407 kb on - strand, within MPMX20_02792 at 2950.510 kb on - strand, within MPMX20_02792 at 2950.672 kb on + strand, within MPMX20_02792 at 2950.672 kb on + strand, within MPMX20_02792 at 2950.680 kb on - strand, within MPMX20_02792 at 2950.680 kb on - strand, within MPMX20_02792 at 2950.680 kb on - strand, within MPMX20_02792 at 2950.690 kb on - strand, within MPMX20_02792 at 2950.828 kb on + strand at 2950.871 kb on + strand at 2950.999 kb on + strand at 2951.007 kb on - strand at 2951.045 kb on + strand, within MPMX20_02793 at 2951.083 kb on - strand, within MPMX20_02793 at 2951.109 kb on - strand, within MPMX20_02793 at 2951.123 kb on + strand, within MPMX20_02793 at 2951.131 kb on - strand, within MPMX20_02793 at 2951.183 kb on - strand, within MPMX20_02793 at 2951.204 kb on - strand, within MPMX20_02793 at 2951.235 kb on - strand, within MPMX20_02793 at 2951.323 kb on + strand, within MPMX20_02793 at 2951.395 kb on - strand, within MPMX20_02793 at 2951.402 kb on + strand, within MPMX20_02793 at 2951.402 kb on + strand, within MPMX20_02793 at 2951.404 kb on + strand, within MPMX20_02793 at 2951.404 kb on + strand, within MPMX20_02793 at 2951.404 kb on + strand, within MPMX20_02793 at 2951.443 kb on - strand, within MPMX20_02793 at 2951.487 kb on - strand, within MPMX20_02793 at 2951.533 kb on + strand, within MPMX20_02793 at 2951.541 kb on - strand, within MPMX20_02793 at 2951.628 kb on + strand, within MPMX20_02793 at 2951.695 kb on + strand at 2951.703 kb on - strand at 2951.760 kb on - strand at 2951.766 kb on + strand at 2951.774 kb on - strand at 2951.787 kb on + strand at 2951.787 kb on + strand at 2951.795 kb on - strand, within MPMX20_02794 at 2951.834 kb on - strand, within MPMX20_02794 at 2951.859 kb on - strand, within MPMX20_02794 at 2951.909 kb on + strand, within MPMX20_02794 at 2951.969 kb on + strand, within MPMX20_02794 at 2951.969 kb on + strand, within MPMX20_02794 at 2952.001 kb on - strand, within MPMX20_02794 at 2952.026 kb on + strand, within MPMX20_02794 at 2952.079 kb on - strand, within MPMX20_02794 at 2952.142 kb on + strand, within MPMX20_02794 at 2952.217 kb on + strand, within MPMX20_02794 at 2952.249 kb on + strand at 2952.283 kb on + strand at 2952.291 kb on - strand at 2952.291 kb on - strand at 2952.314 kb on - strand at 2952.359 kb on - strand, within MPMX20_02795 at 2952.390 kb on + strand, within MPMX20_02795 at 2952.392 kb on + strand, within MPMX20_02795 at 2952.482 kb on + strand, within MPMX20_02795 at 2952.488 kb on + strand, within MPMX20_02795 at 2952.496 kb on - strand, within MPMX20_02795 at 2952.511 kb on - strand, within MPMX20_02795 at 2952.524 kb on - strand, within MPMX20_02795 at 2952.536 kb on - strand, within MPMX20_02795 at 2952.545 kb on - strand, within MPMX20_02795 at 2952.605 kb on - strand, within MPMX20_02795 at 2952.652 kb on + strand, within MPMX20_02795 at 2952.652 kb on + strand, within MPMX20_02795 at 2952.692 kb on - strand, within MPMX20_02795 at 2952.707 kb on + strand, within MPMX20_02795
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 remove 2,950,019 - MPMX20_02792 0.59 +0.1 2,950,055 + MPMX20_02792 0.61 +1.2 2,950,058 - MPMX20_02792 0.61 +2.0 2,950,077 + MPMX20_02792 0.62 +0.6 2,950,077 + MPMX20_02792 0.62 -0.4 2,950,082 + MPMX20_02792 0.62 +1.0 2,950,087 + MPMX20_02792 0.62 +0.5 2,950,095 - MPMX20_02792 0.63 +1.4 2,950,217 - MPMX20_02792 0.68 +0.1 2,950,228 + MPMX20_02792 0.68 +1.0 2,950,233 - MPMX20_02792 0.68 -0.4 2,950,315 + MPMX20_02792 0.72 +1.5 2,950,320 + MPMX20_02792 0.72 +1.0 2,950,371 - MPMX20_02792 0.74 -0.8 2,950,383 - MPMX20_02792 0.75 +1.8 2,950,407 - MPMX20_02792 0.76 +1.1 2,950,510 - MPMX20_02792 0.80 +2.2 2,950,672 + MPMX20_02792 0.87 +0.9 2,950,672 + MPMX20_02792 0.87 -0.4 2,950,680 - MPMX20_02792 0.87 -0.5 2,950,680 - MPMX20_02792 0.87 -0.1 2,950,680 - MPMX20_02792 0.87 +1.0 2,950,690 - MPMX20_02792 0.88 -0.7 2,950,828 + +0.5 2,950,871 + +0.6 2,950,999 + -1.9 2,951,007 - +1.3 2,951,045 + MPMX20_02793 0.11 +1.7 2,951,083 - MPMX20_02793 0.16 +0.8 2,951,109 - MPMX20_02793 0.19 -1.7 2,951,123 + MPMX20_02793 0.21 -0.3 2,951,131 - MPMX20_02793 0.22 -0.2 2,951,183 - MPMX20_02793 0.29 -0.4 2,951,204 - MPMX20_02793 0.32 +1.2 2,951,235 - MPMX20_02793 0.36 +0.4 2,951,323 + MPMX20_02793 0.47 -2.3 2,951,395 - MPMX20_02793 0.57 +0.9 2,951,402 + MPMX20_02793 0.58 +1.1 2,951,402 + MPMX20_02793 0.58 -0.7 2,951,404 + MPMX20_02793 0.58 +1.0 2,951,404 + MPMX20_02793 0.58 -0.2 2,951,404 + MPMX20_02793 0.58 -0.0 2,951,443 - MPMX20_02793 0.63 +2.0 2,951,487 - MPMX20_02793 0.69 +0.7 2,951,533 + MPMX20_02793 0.75 +2.1 2,951,541 - MPMX20_02793 0.76 +1.0 2,951,628 + MPMX20_02793 0.87 +0.9 2,951,695 + -0.5 2,951,703 - +0.9 2,951,760 - +0.3 2,951,766 + -0.0 2,951,774 - +0.1 2,951,787 + +1.8 2,951,787 + +0.1 2,951,795 - MPMX20_02794 0.10 +6.9 2,951,834 - MPMX20_02794 0.17 -1.9 2,951,859 - MPMX20_02794 0.22 -1.0 2,951,909 + MPMX20_02794 0.31 +3.8 2,951,969 + MPMX20_02794 0.42 +0.2 2,951,969 + MPMX20_02794 0.42 -0.9 2,952,001 - MPMX20_02794 0.48 +0.7 2,952,026 + MPMX20_02794 0.52 +0.6 2,952,079 - MPMX20_02794 0.62 -0.0 2,952,142 + MPMX20_02794 0.73 +1.2 2,952,217 + MPMX20_02794 0.87 -0.4 2,952,249 + +0.5 2,952,283 + +0.9 2,952,291 - -0.2 2,952,291 - -0.5 2,952,314 - -1.8 2,952,359 - MPMX20_02795 0.10 +0.2 2,952,390 + MPMX20_02795 0.16 -0.0 2,952,392 + MPMX20_02795 0.16 +0.1 2,952,482 + MPMX20_02795 0.32 +2.8 2,952,488 + MPMX20_02795 0.33 +0.4 2,952,496 - MPMX20_02795 0.34 -2.1 2,952,511 - MPMX20_02795 0.37 -0.4 2,952,524 - MPMX20_02795 0.39 +1.2 2,952,536 - MPMX20_02795 0.41 +0.0 2,952,545 - MPMX20_02795 0.43 +0.8 2,952,605 - MPMX20_02795 0.53 -0.5 2,952,652 + MPMX20_02795 0.61 -1.0 2,952,652 + MPMX20_02795 0.61 -1.5 2,952,692 - MPMX20_02795 0.68 +1.0 2,952,707 + MPMX20_02795 0.71 -0.3
Or see this region's nucleotide sequence