Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02647 and MPMX20_02648 are separated by 395 nucleotides MPMX20_02648 and MPMX20_02649 are separated by 8 nucleotides
MPMX20_02647: MPMX20_02647 - hypothetical protein, at 2,791,308 to 2,791,601
_02647
MPMX20_02648: MPMX20_02648 - hypothetical protein, at 2,791,997 to 2,792,515
_02648
MPMX20_02649: MPMX20_02649 - hypothetical protein, at 2,792,524 to 2,796,915
_02649
Position (kb)
2791
2792 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 2790.451 kb on - strand at 2790.482 kb on - strand at 2790.511 kb on - strand at 2790.528 kb on - strand at 2790.547 kb on - strand at 2790.597 kb on - strand at 2790.601 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.607 kb on - strand at 2790.618 kb on - strand at 2790.656 kb on - strand at 2790.672 kb on - strand at 2790.680 kb on - strand at 2790.680 kb on - strand at 2790.686 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.692 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.703 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.717 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.719 kb on - strand at 2790.734 kb on - strand at 2790.735 kb on - strand at 2790.735 kb on - strand at 2790.740 kb on - strand at 2790.750 kb on - strand at 2790.758 kb on - strand at 2790.789 kb on + strand at 2790.797 kb on - strand at 2790.811 kb on + strand at 2790.819 kb on - strand at 2790.819 kb on - strand at 2790.822 kb on - strand at 2790.863 kb on - strand at 2790.928 kb on + strand at 2790.930 kb on - strand at 2790.930 kb on - strand at 2790.935 kb on - strand at 2790.935 kb on - strand at 2790.982 kb on + strand at 2790.994 kb on + strand at 2791.022 kb on + strand at 2791.030 kb on - strand at 2791.030 kb on - strand at 2791.034 kb on + strand at 2791.058 kb on + strand at 2791.076 kb on + strand at 2791.076 kb on + strand at 2791.076 kb on + strand at 2791.076 kb on + strand at 2791.076 kb on + strand at 2791.077 kb on + strand at 2791.084 kb on + strand at 2791.084 kb on - strand at 2791.092 kb on - strand at 2791.092 kb on - strand at 2791.122 kb on + strand at 2791.122 kb on + strand at 2791.122 kb on + strand at 2791.146 kb on + strand at 2791.156 kb on + strand at 2791.156 kb on + strand at 2791.156 kb on + strand at 2791.156 kb on + strand at 2791.159 kb on - strand at 2791.164 kb on - strand at 2791.164 kb on - strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.180 kb on + strand at 2791.188 kb on - strand at 2791.188 kb on - strand at 2791.188 kb on - strand at 2791.190 kb on + strand at 2791.342 kb on - strand, within MPMX20_02647 at 2791.363 kb on - strand, within MPMX20_02647 at 2791.394 kb on - strand, within MPMX20_02647 at 2791.401 kb on - strand, within MPMX20_02647 at 2791.403 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.410 kb on - strand, within MPMX20_02647 at 2791.418 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.420 kb on - strand, within MPMX20_02647 at 2791.430 kb on - strand, within MPMX20_02647 at 2791.430 kb on - strand, within MPMX20_02647 at 2791.431 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.437 kb on - strand, within MPMX20_02647 at 2791.446 kb on + strand, within MPMX20_02647 at 2791.456 kb on - strand, within MPMX20_02647 at 2791.460 kb on + strand, within MPMX20_02647 at 2791.521 kb on + strand, within MPMX20_02647 at 2791.529 kb on - strand, within MPMX20_02647 at 2791.541 kb on - strand, within MPMX20_02647 at 2791.543 kb on + strand, within MPMX20_02647 at 2791.551 kb on - strand, within MPMX20_02647 at 2791.551 kb on - strand, within MPMX20_02647 at 2791.551 kb on - strand, within MPMX20_02647 at 2791.551 kb on - strand, within MPMX20_02647 at 2791.570 kb on - strand, within MPMX20_02647 at 2791.570 kb on - strand, within MPMX20_02647 at 2791.599 kb on + strand at 2791.601 kb on + strand at 2791.602 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.609 kb on - strand at 2791.642 kb on + strand at 2791.651 kb on - strand at 2791.651 kb on - strand at 2791.651 kb on - strand at 2791.651 kb on - strand at 2791.651 kb on - strand at 2791.651 kb on - strand at 2791.677 kb on + strand at 2791.685 kb on - strand at 2791.685 kb on - strand at 2791.685 kb on - strand at 2791.685 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.728 kb on - strand at 2791.733 kb on - strand at 2791.733 kb on - strand at 2791.733 kb on - strand at 2791.794 kb on - strand at 2791.794 kb on - strand at 2791.794 kb on - strand at 2791.815 kb on - strand at 2791.815 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.867 kb on - strand at 2791.877 kb on - strand at 2791.877 kb on - strand at 2791.877 kb on - strand at 2791.877 kb on - strand at 2791.887 kb on - strand at 2791.887 kb on - strand at 2791.889 kb on - strand at 2791.889 kb on - strand at 2791.965 kb on - strand at 2791.965 kb on - strand at 2791.965 kb on - strand at 2791.975 kb on - strand at 2792.009 kb on - strand at 2792.029 kb on - strand at 2792.550 kb on - strand at 2792.550 kb on - strand at 2792.550 kb on - strand at 2792.567 kb on - strand at 2792.567 kb on - strand at 2792.567 kb on - strand at 2792.576 kb on - strand at 2792.576 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 remove 2,790,451 - -0.4 2,790,482 - -0.5 2,790,511 - +0.7 2,790,528 - -0.6 2,790,547 - +1.4 2,790,597 - +0.3 2,790,601 - +1.1 2,790,602 - +1.1 2,790,602 - +0.4 2,790,602 - +2.7 2,790,602 - -1.1 2,790,602 - -1.2 2,790,602 - +0.4 2,790,602 - -2.2 2,790,607 - +0.6 2,790,618 - -0.7 2,790,656 - -1.3 2,790,672 - -0.7 2,790,680 - -0.3 2,790,680 - +0.3 2,790,686 - +0.4 2,790,688 - +1.9 2,790,688 - +0.1 2,790,688 - +0.4 2,790,688 - +1.3 2,790,688 - -0.9 2,790,688 - +0.3 2,790,688 - -1.6 2,790,688 - -0.2 2,790,688 - +1.0 2,790,688 - -0.5 2,790,688 - +0.3 2,790,688 - +3.2 2,790,688 - +0.5 2,790,688 - -2.2 2,790,688 - -1.5 2,790,688 - +0.8 2,790,688 - -2.6 2,790,688 - -1.7 2,790,692 - -1.1 2,790,693 - -1.9 2,790,693 - -1.9 2,790,693 - +1.1 2,790,693 - -1.9 2,790,693 - -0.1 2,790,693 - +2.1 2,790,693 - -0.3 2,790,693 - +0.1 2,790,693 - -0.7 2,790,693 - -0.6 2,790,693 - -0.5 2,790,693 - +1.6 2,790,693 - +1.7 2,790,693 - +0.9 2,790,693 - +2.3 2,790,698 - -0.2 2,790,698 - +0.9 2,790,698 - +0.3 2,790,698 - -1.9 2,790,698 - +2.2 2,790,698 - +1.7 2,790,698 - -1.3 2,790,698 - -0.3 2,790,698 - -0.1 2,790,698 - +1.7 2,790,698 - -1.3 2,790,698 - -0.9 2,790,698 - +2.0 2,790,698 - -1.2 2,790,698 - +0.4 2,790,698 - +3.3 2,790,698 - +0.3 2,790,698 - -0.3 2,790,698 - +1.9 2,790,698 - +0.4 2,790,698 - +1.1 2,790,698 - -1.4 2,790,698 - +0.7 2,790,698 - -2.1 2,790,698 - +2.1 2,790,698 - -0.9 2,790,698 - +1.7 2,790,698 - -0.2 2,790,698 - +2.3 2,790,698 - -1.6 2,790,698 - +0.7 2,790,698 - -1.7 2,790,698 - -0.4 2,790,698 - +0.5 2,790,698 - -0.9 2,790,698 - +2.7 2,790,698 - +0.8 2,790,698 - +0.3 2,790,698 - +0.9 2,790,698 - +0.7 2,790,698 - +0.1 2,790,698 - +1.5 2,790,698 - +1.4 2,790,698 - +0.1 2,790,698 - -1.5 2,790,698 - -1.0 2,790,698 - -1.3 2,790,698 - -1.8 2,790,698 - -0.4 2,790,703 - -1.5 2,790,712 - -0.2 2,790,712 - +0.1 2,790,712 - -0.3 2,790,712 - -0.1 2,790,712 - -0.7 2,790,712 - -0.1 2,790,717 - -2.5 2,790,718 - +1.8 2,790,718 - -0.8 2,790,718 - +0.8 2,790,718 - -0.9 2,790,718 - +0.5 2,790,718 - +0.1 2,790,718 - -1.2 2,790,718 - +1.5 2,790,718 - -1.0 2,790,718 - -1.7 2,790,718 - -1.6 2,790,718 - -0.4 2,790,718 - -0.5 2,790,718 - +0.1 2,790,718 - -0.8 2,790,719 - +0.5 2,790,734 - +0.1 2,790,735 - +0.4 2,790,735 - -0.9 2,790,740 - -0.1 2,790,750 - +0.0 2,790,758 - +1.7 2,790,789 + +0.1 2,790,797 - -0.6 2,790,811 + -1.9 2,790,819 - -0.3 2,790,819 - -0.6 2,790,822 - +1.7 2,790,863 - -0.1 2,790,928 + +0.4 2,790,930 - +1.1 2,790,930 - -1.2 2,790,935 - -1.8 2,790,935 - +0.2 2,790,982 + +0.7 2,790,994 + +0.2 2,791,022 + +0.9 2,791,030 - -1.5 2,791,030 - +0.2 2,791,034 + -1.2 2,791,058 + -0.8 2,791,076 + +0.5 2,791,076 + +1.1 2,791,076 + -1.5 2,791,076 + -0.2 2,791,076 + +0.1 2,791,077 + -0.9 2,791,084 + +0.0 2,791,084 - +2.7 2,791,092 - +3.3 2,791,092 - +0.4 2,791,122 + +1.1 2,791,122 + -0.6 2,791,122 + -0.9 2,791,146 + +0.3 2,791,156 + -0.0 2,791,156 + +0.0 2,791,156 + -0.1 2,791,156 + +0.1 2,791,159 - -1.5 2,791,164 - +1.7 2,791,164 - +1.7 2,791,180 + +0.3 2,791,180 + -0.1 2,791,180 + -2.2 2,791,180 + +0.3 2,791,180 + -0.1 2,791,180 + +0.7 2,791,180 + +0.1 2,791,180 + -1.7 2,791,180 + -0.5 2,791,180 + +0.1 2,791,180 + -0.9 2,791,180 + -0.5 2,791,180 + -0.3 2,791,180 + -1.6 2,791,180 + +2.7 2,791,188 - -1.4 2,791,188 - +1.7 2,791,188 - +0.1 2,791,190 + -0.3 2,791,342 - MPMX20_02647 0.12 -0.2 2,791,363 - MPMX20_02647 0.19 +1.0 2,791,394 - MPMX20_02647 0.29 +0.7 2,791,401 - MPMX20_02647 0.32 +2.7 2,791,403 - MPMX20_02647 0.32 -1.1 2,791,410 - MPMX20_02647 0.35 +1.4 2,791,410 - MPMX20_02647 0.35 +0.4 2,791,410 - MPMX20_02647 0.35 -0.6 2,791,410 - MPMX20_02647 0.35 +0.2 2,791,410 - MPMX20_02647 0.35 -1.1 2,791,410 - MPMX20_02647 0.35 +1.4 2,791,418 - MPMX20_02647 0.37 +0.1 2,791,420 - MPMX20_02647 0.38 -0.1 2,791,420 - MPMX20_02647 0.38 +1.1 2,791,420 - MPMX20_02647 0.38 +1.0 2,791,420 - MPMX20_02647 0.38 +0.9 2,791,420 - MPMX20_02647 0.38 +0.8 2,791,420 - MPMX20_02647 0.38 -2.0 2,791,420 - MPMX20_02647 0.38 +1.4 2,791,420 - MPMX20_02647 0.38 +0.4 2,791,420 - MPMX20_02647 0.38 +0.3 2,791,420 - MPMX20_02647 0.38 +0.4 2,791,420 - MPMX20_02647 0.38 +3.1 2,791,420 - MPMX20_02647 0.38 +0.4 2,791,420 - MPMX20_02647 0.38 -0.4 2,791,420 - MPMX20_02647 0.38 -0.7 2,791,420 - MPMX20_02647 0.38 -0.0 2,791,420 - MPMX20_02647 0.38 +3.7 2,791,430 - MPMX20_02647 0.41 -0.1 2,791,430 - MPMX20_02647 0.41 +0.6 2,791,431 - MPMX20_02647 0.42 +1.3 2,791,437 - MPMX20_02647 0.44 +0.5 2,791,437 - MPMX20_02647 0.44 +0.8 2,791,437 - MPMX20_02647 0.44 -0.7 2,791,437 - MPMX20_02647 0.44 +1.5 2,791,437 - MPMX20_02647 0.44 +1.1 2,791,437 - MPMX20_02647 0.44 +1.4 2,791,437 - MPMX20_02647 0.44 -1.1 2,791,446 + MPMX20_02647 0.47 +4.7 2,791,456 - MPMX20_02647 0.50 +1.4 2,791,460 + MPMX20_02647 0.52 +0.4 2,791,521 + MPMX20_02647 0.72 +1.1 2,791,529 - MPMX20_02647 0.75 +0.7 2,791,541 - MPMX20_02647 0.79 -0.5 2,791,543 + MPMX20_02647 0.80 -2.4 2,791,551 - MPMX20_02647 0.83 -0.7 2,791,551 - MPMX20_02647 0.83 +1.7 2,791,551 - MPMX20_02647 0.83 -0.1 2,791,551 - MPMX20_02647 0.83 -0.9 2,791,570 - MPMX20_02647 0.89 -0.2 2,791,570 - MPMX20_02647 0.89 -1.0 2,791,599 + -2.2 2,791,601 + +0.1 2,791,602 - -0.5 2,791,609 - +0.7 2,791,609 - +0.9 2,791,609 - -0.5 2,791,609 - +1.7 2,791,609 - -1.1 2,791,609 - +0.1 2,791,609 - +0.4 2,791,609 - +0.5 2,791,609 - -0.5 2,791,609 - -0.6 2,791,609 - +0.1 2,791,609 - +0.6 2,791,609 - +1.1 2,791,609 - -0.7 2,791,609 - -1.5 2,791,609 - -1.5 2,791,609 - +0.3 2,791,642 + +1.1 2,791,651 - -0.7 2,791,651 - -1.1 2,791,651 - +0.1 2,791,651 - +0.5 2,791,651 - -1.1 2,791,651 - -0.9 2,791,677 + -1.6 2,791,685 - -0.1 2,791,685 - -2.1 2,791,685 - +1.7 2,791,685 - -0.7 2,791,728 - +0.1 2,791,728 - +0.5 2,791,728 - +0.4 2,791,728 - +1.0 2,791,728 - -0.6 2,791,728 - -1.0 2,791,728 - +0.8 2,791,733 - +1.5 2,791,733 - +0.9 2,791,733 - +1.0 2,791,794 - +2.7 2,791,794 - -0.5 2,791,794 - +0.3 2,791,815 - +1.5 2,791,815 - -0.1 2,791,867 - -1.4 2,791,867 - -0.2 2,791,867 - +6.4 2,791,867 - +0.1 2,791,867 - -1.6 2,791,867 - +2.7 2,791,867 - +0.4 2,791,877 - -3.0 2,791,877 - +0.4 2,791,877 - +0.1 2,791,877 - +0.9 2,791,887 - -2.5 2,791,887 - +1.7 2,791,889 - +1.7 2,791,889 - +0.4 2,791,965 - +1.1 2,791,965 - +0.5 2,791,965 - -0.3 2,791,975 - -0.3 2,792,009 - -1.5 2,792,029 - +1.1 2,792,550 - +0.1 2,792,550 - +0.3 2,792,550 - +0.7 2,792,567 - -0.3 2,792,567 - -0.9 2,792,567 - -0.3 2,792,576 - +0.0 2,792,576 - -1.2
Or see this region's nucleotide sequence