Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02586

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02584 and MPMX20_02585 are separated by 11 nucleotidesMPMX20_02585 and MPMX20_02586 are separated by 14 nucleotidesMPMX20_02586 and MPMX20_02587 are separated by 83 nucleotides MPMX20_02584: MPMX20_02584 - Oligopeptide transport ATP-binding protein OppD, at 2,719,168 to 2,720,181 _02584 MPMX20_02585: MPMX20_02585 - Oligopeptide transport system permease protein OppC, at 2,720,193 to 2,721,101 _02585 MPMX20_02586: MPMX20_02586 - Oligopeptide transport system permease protein OppB, at 2,721,116 to 2,722,036 _02586 MPMX20_02587: MPMX20_02587 - Periplasmic oligopeptide-binding protein, at 2,722,120 to 2,723,751 _02587 Position (kb) 2721 2722 2723Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2720.124 kb on + strandat 2720.129 kb on + strandat 2720.184 kb on - strandat 2720.191 kb on + strandat 2720.199 kb on - strandat 2720.199 kb on - strandat 2720.199 kb on - strandat 2720.199 kb on - strandat 2720.225 kb on + strandat 2720.225 kb on + strandat 2720.280 kb on + strandat 2720.288 kb on - strand, within MPMX20_02585at 2720.288 kb on - strand, within MPMX20_02585at 2720.333 kb on - strand, within MPMX20_02585at 2720.354 kb on - strand, within MPMX20_02585at 2720.354 kb on - strand, within MPMX20_02585at 2720.369 kb on + strand, within MPMX20_02585at 2720.387 kb on - strand, within MPMX20_02585at 2720.435 kb on + strand, within MPMX20_02585at 2720.443 kb on - strand, within MPMX20_02585at 2720.458 kb on - strand, within MPMX20_02585at 2720.484 kb on + strand, within MPMX20_02585at 2720.494 kb on + strand, within MPMX20_02585at 2720.502 kb on - strand, within MPMX20_02585at 2720.502 kb on - strand, within MPMX20_02585at 2720.502 kb on - strand, within MPMX20_02585at 2720.536 kb on - strand, within MPMX20_02585at 2720.647 kb on - strand, within MPMX20_02585at 2720.719 kb on - strand, within MPMX20_02585at 2720.741 kb on - strand, within MPMX20_02585at 2720.825 kb on - strand, within MPMX20_02585at 2721.037 kb on - strandat 2721.144 kb on + strandat 2721.144 kb on + strandat 2721.206 kb on + strandat 2721.248 kb on - strand, within MPMX20_02586at 2721.254 kb on - strand, within MPMX20_02586at 2721.330 kb on + strand, within MPMX20_02586at 2721.360 kb on - strand, within MPMX20_02586at 2721.365 kb on - strand, within MPMX20_02586at 2721.371 kb on + strand, within MPMX20_02586at 2721.419 kb on + strand, within MPMX20_02586at 2721.436 kb on + strand, within MPMX20_02586at 2721.480 kb on + strand, within MPMX20_02586at 2721.546 kb on + strand, within MPMX20_02586at 2721.578 kb on + strand, within MPMX20_02586at 2721.579 kb on + strand, within MPMX20_02586at 2721.601 kb on + strand, within MPMX20_02586at 2721.611 kb on + strand, within MPMX20_02586at 2721.611 kb on + strand, within MPMX20_02586at 2721.611 kb on + strand, within MPMX20_02586at 2721.619 kb on - strand, within MPMX20_02586at 2721.619 kb on - strand, within MPMX20_02586at 2721.619 kb on - strand, within MPMX20_02586at 2721.639 kb on - strand, within MPMX20_02586at 2721.656 kb on - strand, within MPMX20_02586at 2721.702 kb on - strand, within MPMX20_02586at 2721.719 kb on + strand, within MPMX20_02586at 2721.738 kb on + strand, within MPMX20_02586at 2721.766 kb on + strand, within MPMX20_02586at 2721.821 kb on - strand, within MPMX20_02586at 2721.842 kb on + strand, within MPMX20_02586at 2721.851 kb on - strand, within MPMX20_02586at 2721.916 kb on + strand, within MPMX20_02586at 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.003 kb on + strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.011 kb on - strandat 2722.046 kb on - strandat 2722.078 kb on - strandat 2722.094 kb on + strandat 2722.094 kb on + strandat 2722.094 kb on + strandat 2722.099 kb on + strandat 2722.101 kb on - strandat 2722.102 kb on - strandat 2722.102 kb on - strandat 2722.102 kb on - strandat 2722.102 kb on - strandat 2722.102 kb on - strandat 2722.102 kb on - strandat 2722.113 kb on - strandat 2722.178 kb on + strandat 2722.226 kb on - strandat 2722.230 kb on - strandat 2722.250 kb on + strandat 2722.271 kb on - strandat 2722.281 kb on + strandat 2722.289 kb on - strand, within MPMX20_02587at 2722.289 kb on - strand, within MPMX20_02587at 2722.296 kb on - strand, within MPMX20_02587at 2722.346 kb on + strand, within MPMX20_02587at 2722.354 kb on - strand, within MPMX20_02587at 2722.354 kb on - strand, within MPMX20_02587at 2722.365 kb on + strand, within MPMX20_02587at 2722.373 kb on - strand, within MPMX20_02587at 2722.398 kb on - strand, within MPMX20_02587at 2722.419 kb on + strand, within MPMX20_02587at 2722.566 kb on + strand, within MPMX20_02587at 2722.566 kb on + strand, within MPMX20_02587at 2722.566 kb on + strand, within MPMX20_02587at 2722.566 kb on + strand, within MPMX20_02587at 2722.574 kb on + strand, within MPMX20_02587at 2722.574 kb on - strand, within MPMX20_02587at 2722.574 kb on - strand, within MPMX20_02587at 2722.577 kb on + strand, within MPMX20_02587at 2722.582 kb on - strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.587 kb on + strand, within MPMX20_02587at 2722.595 kb on - strand, within MPMX20_02587at 2722.595 kb on - strand, within MPMX20_02587at 2722.595 kb on - strand, within MPMX20_02587at 2722.595 kb on - strand, within MPMX20_02587at 2722.595 kb on - strand, within MPMX20_02587at 2722.685 kb on + strand, within MPMX20_02587at 2722.721 kb on + strand, within MPMX20_02587at 2722.721 kb on + strand, within MPMX20_02587at 2722.721 kb on + strand, within MPMX20_02587at 2722.729 kb on - strand, within MPMX20_02587at 2722.734 kb on - strand, within MPMX20_02587at 2722.785 kb on + strand, within MPMX20_02587at 2722.785 kb on + strand, within MPMX20_02587at 2722.785 kb on + strand, within MPMX20_02587at 2722.800 kb on + strand, within MPMX20_02587at 2722.815 kb on + strand, within MPMX20_02587at 2722.819 kb on + strand, within MPMX20_02587at 2722.823 kb on - strand, within MPMX20_02587at 2722.852 kb on + strand, within MPMX20_02587at 2722.859 kb on + strand, within MPMX20_02587at 2722.936 kb on + strand, within MPMX20_02587at 2722.970 kb on + strand, within MPMX20_02587at 2722.972 kb on + strand, within MPMX20_02587at 2722.986 kb on + strand, within MPMX20_02587at 2722.986 kb on + strand, within MPMX20_02587at 2722.994 kb on - strand, within MPMX20_02587at 2722.994 kb on - strand, within MPMX20_02587

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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2,720,124 + -2.2
2,720,129 + +0.9
2,720,184 - -0.6
2,720,191 + -0.5
2,720,199 - -0.5
2,720,199 - +0.6
2,720,199 - +0.5
2,720,199 - +0.0
2,720,225 + -1.6
2,720,225 + +0.1
2,720,280 + +0.4
2,720,288 - MPMX20_02585 0.10 -0.1
2,720,288 - MPMX20_02585 0.10 -2.4
2,720,333 - MPMX20_02585 0.15 -0.4
2,720,354 - MPMX20_02585 0.18 -0.4
2,720,354 - MPMX20_02585 0.18 -1.7
2,720,369 + MPMX20_02585 0.19 +0.6
2,720,387 - MPMX20_02585 0.21 -0.6
2,720,435 + MPMX20_02585 0.27 -0.5
2,720,443 - MPMX20_02585 0.28 -2.4
2,720,458 - MPMX20_02585 0.29 -0.1
2,720,484 + MPMX20_02585 0.32 -2.7
2,720,494 + MPMX20_02585 0.33 -0.6
2,720,502 - MPMX20_02585 0.34 +0.2
2,720,502 - MPMX20_02585 0.34 -0.9
2,720,502 - MPMX20_02585 0.34 -1.5
2,720,536 - MPMX20_02585 0.38 -0.3
2,720,647 - MPMX20_02585 0.50 -1.0
2,720,719 - MPMX20_02585 0.58 +0.3
2,720,741 - MPMX20_02585 0.60 +0.1
2,720,825 - MPMX20_02585 0.70 -0.3
2,721,037 - +0.3
2,721,144 + -2.3
2,721,144 + +1.1
2,721,206 + +0.4
2,721,248 - MPMX20_02586 0.14 -1.7
2,721,254 - MPMX20_02586 0.15 -0.2
2,721,330 + MPMX20_02586 0.23 -1.0
2,721,360 - MPMX20_02586 0.26 -0.2
2,721,365 - MPMX20_02586 0.27 -2.6
2,721,371 + MPMX20_02586 0.28 +0.7
2,721,419 + MPMX20_02586 0.33 -1.6
2,721,436 + MPMX20_02586 0.35 -3.2
2,721,480 + MPMX20_02586 0.40 -0.5
2,721,546 + MPMX20_02586 0.47 -1.9
2,721,578 + MPMX20_02586 0.50 -2.8
2,721,579 + MPMX20_02586 0.50 -0.4
2,721,601 + MPMX20_02586 0.53 -1.3
2,721,611 + MPMX20_02586 0.54 -2.0
2,721,611 + MPMX20_02586 0.54 -0.8
2,721,611 + MPMX20_02586 0.54 +0.7
2,721,619 - MPMX20_02586 0.55 -2.1
2,721,619 - MPMX20_02586 0.55 -1.0
2,721,619 - MPMX20_02586 0.55 +0.1
2,721,639 - MPMX20_02586 0.57 +1.3
2,721,656 - MPMX20_02586 0.59 -1.4
2,721,702 - MPMX20_02586 0.64 +0.7
2,721,719 + MPMX20_02586 0.65 -1.1
2,721,738 + MPMX20_02586 0.68 -1.3
2,721,766 + MPMX20_02586 0.71 -1.1
2,721,821 - MPMX20_02586 0.77 +0.4
2,721,842 + MPMX20_02586 0.79 +0.2
2,721,851 - MPMX20_02586 0.80 +0.4
2,721,916 + MPMX20_02586 0.87 +0.3
2,722,003 + -1.9
2,722,003 + -0.2
2,722,003 + -0.4
2,722,003 + -1.3
2,722,003 + -0.8
2,722,003 + -0.6
2,722,003 + +1.3
2,722,003 + -1.6
2,722,003 + -2.2
2,722,003 + -2.6
2,722,003 + -2.3
2,722,003 + -1.9
2,722,011 - +1.7
2,722,011 - -2.1
2,722,011 - -0.5
2,722,011 - -0.6
2,722,011 - -2.8
2,722,011 - +0.1
2,722,011 - -0.7
2,722,011 - +0.4
2,722,011 - +0.1
2,722,011 - -0.6
2,722,011 - +0.2
2,722,011 - +1.1
2,722,046 - -1.2
2,722,078 - -0.8
2,722,094 + -0.9
2,722,094 + -1.6
2,722,094 + -1.3
2,722,099 + -1.9
2,722,101 - -0.6
2,722,102 - -0.1
2,722,102 - +0.8
2,722,102 - -0.1
2,722,102 - +1.7
2,722,102 - +0.5
2,722,102 - -1.7
2,722,113 - -1.5
2,722,178 + -1.0
2,722,226 - -1.1
2,722,230 - -2.0
2,722,250 + -1.4
2,722,271 - -1.1
2,722,281 + +2.7
2,722,289 - MPMX20_02587 0.10 -0.7
2,722,289 - MPMX20_02587 0.10 -0.3
2,722,296 - MPMX20_02587 0.11 -1.6
2,722,346 + MPMX20_02587 0.14 -2.1
2,722,354 - MPMX20_02587 0.14 -0.6
2,722,354 - MPMX20_02587 0.14 -1.1
2,722,365 + MPMX20_02587 0.15 -2.3
2,722,373 - MPMX20_02587 0.16 -1.8
2,722,398 - MPMX20_02587 0.17 +0.1
2,722,419 + MPMX20_02587 0.18 -0.3
2,722,566 + MPMX20_02587 0.27 -0.6
2,722,566 + MPMX20_02587 0.27 -1.1
2,722,566 + MPMX20_02587 0.27 -0.6
2,722,566 + MPMX20_02587 0.27 -0.5
2,722,574 + MPMX20_02587 0.28 +1.2
2,722,574 - MPMX20_02587 0.28 -0.6
2,722,574 - MPMX20_02587 0.28 +0.4
2,722,577 + MPMX20_02587 0.28 -1.0
2,722,582 - MPMX20_02587 0.28 -0.6
2,722,587 + MPMX20_02587 0.29 -2.2
2,722,587 + MPMX20_02587 0.29 +1.9
2,722,587 + MPMX20_02587 0.29 -0.5
2,722,587 + MPMX20_02587 0.29 -1.7
2,722,587 + MPMX20_02587 0.29 -0.2
2,722,587 + MPMX20_02587 0.29 -0.4
2,722,595 - MPMX20_02587 0.29 -2.8
2,722,595 - MPMX20_02587 0.29 +0.4
2,722,595 - MPMX20_02587 0.29 -0.5
2,722,595 - MPMX20_02587 0.29 -1.1
2,722,595 - MPMX20_02587 0.29 -0.9
2,722,685 + MPMX20_02587 0.35 +0.9
2,722,721 + MPMX20_02587 0.37 -2.4
2,722,721 + MPMX20_02587 0.37 -0.4
2,722,721 + MPMX20_02587 0.37 -1.3
2,722,729 - MPMX20_02587 0.37 -0.2
2,722,734 - MPMX20_02587 0.38 -0.1
2,722,785 + MPMX20_02587 0.41 -1.3
2,722,785 + MPMX20_02587 0.41 -0.5
2,722,785 + MPMX20_02587 0.41 -0.5
2,722,800 + MPMX20_02587 0.42 +0.7
2,722,815 + MPMX20_02587 0.43 +1.5
2,722,819 + MPMX20_02587 0.43 -0.5
2,722,823 - MPMX20_02587 0.43 -0.6
2,722,852 + MPMX20_02587 0.45 -1.4
2,722,859 + MPMX20_02587 0.45 +1.7
2,722,936 + MPMX20_02587 0.50 +1.1
2,722,970 + MPMX20_02587 0.52 +0.4
2,722,972 + MPMX20_02587 0.52 -0.1
2,722,986 + MPMX20_02587 0.53 -0.7
2,722,986 + MPMX20_02587 0.53 -0.9
2,722,994 - MPMX20_02587 0.54 +0.9
2,722,994 - MPMX20_02587 0.54 -0.3

Or see this region's nucleotide sequence