Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00798

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00797 and MPMX20_00798 overlap by 11 nucleotidesMPMX20_00798 and MPMX20_00799 are separated by 10 nucleotidesMPMX20_00799 and MPMX20_00800 are separated by 173 nucleotides MPMX20_00797: MPMX20_00797 - Type II secretion system protein F, at 833,438 to 834,622 _00797 MPMX20_00798: MPMX20_00798 - Type II secretion system protein E, at 834,612 to 835,994 _00798 MPMX20_00799: MPMX20_00799 - Fimbrial protein, at 836,005 to 836,442 _00799 MPMX20_00800: MPMX20_00800 - Nicotinate-nucleotide pyrophosphorylase [carboxylating], at 836,616 to 837,509 _00800 Position (kb) 834 835 836Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 833.632 kb on + strand, within MPMX20_00797at 833.650 kb on + strand, within MPMX20_00797at 833.703 kb on + strand, within MPMX20_00797at 833.711 kb on - strand, within MPMX20_00797at 833.759 kb on + strand, within MPMX20_00797at 833.759 kb on + strand, within MPMX20_00797at 833.759 kb on + strand, within MPMX20_00797at 833.767 kb on - strand, within MPMX20_00797at 833.767 kb on - strand, within MPMX20_00797at 833.767 kb on - strand, within MPMX20_00797at 833.767 kb on - strand, within MPMX20_00797at 833.773 kb on + strand, within MPMX20_00797at 833.778 kb on + strand, within MPMX20_00797at 833.781 kb on - strand, within MPMX20_00797at 833.781 kb on - strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.783 kb on + strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.791 kb on - strand, within MPMX20_00797at 833.820 kb on + strand, within MPMX20_00797at 833.867 kb on - strand, within MPMX20_00797at 833.883 kb on + strand, within MPMX20_00797at 833.917 kb on - strand, within MPMX20_00797at 833.951 kb on + strand, within MPMX20_00797at 833.961 kb on - strand, within MPMX20_00797at 833.976 kb on + strand, within MPMX20_00797at 833.976 kb on + strand, within MPMX20_00797at 833.976 kb on + strand, within MPMX20_00797at 833.984 kb on - strand, within MPMX20_00797at 833.984 kb on - strand, within MPMX20_00797at 833.984 kb on - strand, within MPMX20_00797at 833.986 kb on + strand, within MPMX20_00797at 833.986 kb on + strand, within MPMX20_00797at 833.994 kb on - strand, within MPMX20_00797at 833.994 kb on - strand, within MPMX20_00797at 834.084 kb on + strand, within MPMX20_00797at 834.094 kb on + strand, within MPMX20_00797at 834.201 kb on - strand, within MPMX20_00797at 834.201 kb on - strand, within MPMX20_00797at 834.201 kb on - strand, within MPMX20_00797at 834.226 kb on + strand, within MPMX20_00797at 834.273 kb on + strand, within MPMX20_00797at 834.306 kb on + strand, within MPMX20_00797at 834.329 kb on + strand, within MPMX20_00797at 834.340 kb on - strand, within MPMX20_00797at 834.405 kb on - strand, within MPMX20_00797at 834.454 kb on - strand, within MPMX20_00797at 834.473 kb on - strand, within MPMX20_00797at 834.478 kb on - strand, within MPMX20_00797at 834.500 kb on + strand, within MPMX20_00797at 834.506 kb on - strandat 834.508 kb on - strandat 834.523 kb on - strandat 834.597 kb on - strandat 834.661 kb on + strandat 834.740 kb on + strandat 834.740 kb on + strandat 834.748 kb on - strandat 834.748 kb on - strandat 834.777 kb on + strand, within MPMX20_00798at 834.777 kb on + strand, within MPMX20_00798at 834.790 kb on - strand, within MPMX20_00798at 834.797 kb on + strand, within MPMX20_00798at 834.854 kb on - strand, within MPMX20_00798at 834.966 kb on - strand, within MPMX20_00798at 835.040 kb on + strand, within MPMX20_00798at 835.062 kb on + strand, within MPMX20_00798at 835.199 kb on + strand, within MPMX20_00798at 835.199 kb on + strand, within MPMX20_00798at 835.208 kb on - strand, within MPMX20_00798at 835.208 kb on - strand, within MPMX20_00798at 835.263 kb on - strand, within MPMX20_00798at 835.302 kb on - strand, within MPMX20_00798at 835.479 kb on + strand, within MPMX20_00798at 835.492 kb on - strand, within MPMX20_00798at 835.525 kb on + strand, within MPMX20_00798at 835.533 kb on - strand, within MPMX20_00798at 835.533 kb on - strand, within MPMX20_00798at 835.539 kb on + strand, within MPMX20_00798at 835.680 kb on - strand, within MPMX20_00798at 835.682 kb on - strand, within MPMX20_00798at 835.682 kb on - strand, within MPMX20_00798at 835.733 kb on + strand, within MPMX20_00798at 835.790 kb on + strand, within MPMX20_00798at 835.828 kb on + strand, within MPMX20_00798at 835.884 kb on - strandat 835.884 kb on - strandat 835.886 kb on + strandat 835.894 kb on - strandat 835.899 kb on - strandat 835.918 kb on - strandat 836.003 kb on + strandat 836.033 kb on + strandat 836.033 kb on + strandat 836.041 kb on - strandat 836.088 kb on - strand, within MPMX20_00799at 836.090 kb on + strand, within MPMX20_00799at 836.110 kb on + strand, within MPMX20_00799at 836.110 kb on + strand, within MPMX20_00799at 836.149 kb on + strand, within MPMX20_00799at 836.228 kb on + strand, within MPMX20_00799at 836.248 kb on + strand, within MPMX20_00799at 836.248 kb on + strand, within MPMX20_00799at 836.256 kb on - strand, within MPMX20_00799at 836.261 kb on + strand, within MPMX20_00799at 836.273 kb on + strand, within MPMX20_00799at 836.281 kb on - strand, within MPMX20_00799at 836.385 kb on + strand, within MPMX20_00799at 836.417 kb on - strandat 836.417 kb on - strandat 836.418 kb on + strandat 836.425 kb on + strandat 836.437 kb on + strandat 836.437 kb on + strandat 836.445 kb on - strandat 836.472 kb on - strandat 836.546 kb on + strandat 836.546 kb on + strandat 836.546 kb on + strandat 836.554 kb on - strandat 836.554 kb on - strandat 836.653 kb on + strandat 836.661 kb on - strandat 836.719 kb on + strand, within MPMX20_00800at 836.791 kb on + strand, within MPMX20_00800at 836.799 kb on - strand, within MPMX20_00800at 836.844 kb on - strand, within MPMX20_00800at 836.885 kb on - strand, within MPMX20_00800at 836.888 kb on + strand, within MPMX20_00800at 836.966 kb on + strand, within MPMX20_00800at 836.984 kb on - strand, within MPMX20_00800

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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833,632 + MPMX20_00797 0.16 -0.4
833,650 + MPMX20_00797 0.18 -0.7
833,703 + MPMX20_00797 0.22 +0.9
833,711 - MPMX20_00797 0.23 -1.0
833,759 + MPMX20_00797 0.27 -1.3
833,759 + MPMX20_00797 0.27 -1.2
833,759 + MPMX20_00797 0.27 -1.7
833,767 - MPMX20_00797 0.28 +3.3
833,767 - MPMX20_00797 0.28 -0.3
833,767 - MPMX20_00797 0.28 -0.9
833,767 - MPMX20_00797 0.28 -0.7
833,773 + MPMX20_00797 0.28 -1.0
833,778 + MPMX20_00797 0.29 -0.3
833,781 - MPMX20_00797 0.29 +1.5
833,781 - MPMX20_00797 0.29 +0.9
833,783 + MPMX20_00797 0.29 -0.7
833,783 + MPMX20_00797 0.29 -1.0
833,783 + MPMX20_00797 0.29 -0.7
833,783 + MPMX20_00797 0.29 -0.2
833,783 + MPMX20_00797 0.29 +0.5
833,783 + MPMX20_00797 0.29 -1.1
833,791 - MPMX20_00797 0.30 +1.8
833,791 - MPMX20_00797 0.30 -0.5
833,791 - MPMX20_00797 0.30 -2.3
833,791 - MPMX20_00797 0.30 +1.3
833,791 - MPMX20_00797 0.30 +0.0
833,791 - MPMX20_00797 0.30 -0.8
833,820 + MPMX20_00797 0.32 +1.8
833,867 - MPMX20_00797 0.36 +0.3
833,883 + MPMX20_00797 0.38 +0.6
833,917 - MPMX20_00797 0.40 -0.5
833,951 + MPMX20_00797 0.43 -0.2
833,961 - MPMX20_00797 0.44 -1.5
833,976 + MPMX20_00797 0.45 -0.9
833,976 + MPMX20_00797 0.45 +1.0
833,976 + MPMX20_00797 0.45 -1.4
833,984 - MPMX20_00797 0.46 -2.0
833,984 - MPMX20_00797 0.46 +2.4
833,984 - MPMX20_00797 0.46 +0.2
833,986 + MPMX20_00797 0.46 +0.7
833,986 + MPMX20_00797 0.46 -1.2
833,994 - MPMX20_00797 0.47 +0.3
833,994 - MPMX20_00797 0.47 -0.3
834,084 + MPMX20_00797 0.55 +1.9
834,094 + MPMX20_00797 0.55 -0.1
834,201 - MPMX20_00797 0.64 +1.3
834,201 - MPMX20_00797 0.64 -0.8
834,201 - MPMX20_00797 0.64 +0.8
834,226 + MPMX20_00797 0.66 -1.3
834,273 + MPMX20_00797 0.70 +0.9
834,306 + MPMX20_00797 0.73 -0.7
834,329 + MPMX20_00797 0.75 +1.2
834,340 - MPMX20_00797 0.76 -0.4
834,405 - MPMX20_00797 0.82 -0.3
834,454 - MPMX20_00797 0.86 -0.5
834,473 - MPMX20_00797 0.87 +2.1
834,478 - MPMX20_00797 0.88 -0.2
834,500 + MPMX20_00797 0.90 +0.9
834,506 - +0.5
834,508 - +0.7
834,523 - -0.5
834,597 - -0.9
834,661 + -1.5
834,740 + +0.2
834,740 + -1.4
834,748 - +0.7
834,748 - -1.0
834,777 + MPMX20_00798 0.12 -0.7
834,777 + MPMX20_00798 0.12 -1.3
834,790 - MPMX20_00798 0.13 -0.7
834,797 + MPMX20_00798 0.13 -0.2
834,854 - MPMX20_00798 0.17 -0.1
834,966 - MPMX20_00798 0.26 -0.2
835,040 + MPMX20_00798 0.31 -2.1
835,062 + MPMX20_00798 0.33 +0.4
835,199 + MPMX20_00798 0.42 -0.7
835,199 + MPMX20_00798 0.42 -1.9
835,208 - MPMX20_00798 0.43 +2.5
835,208 - MPMX20_00798 0.43 +5.5
835,263 - MPMX20_00798 0.47 -0.6
835,302 - MPMX20_00798 0.50 -0.5
835,479 + MPMX20_00798 0.63 -0.5
835,492 - MPMX20_00798 0.64 +0.1
835,525 + MPMX20_00798 0.66 -1.7
835,533 - MPMX20_00798 0.67 -0.2
835,533 - MPMX20_00798 0.67 -0.1
835,539 + MPMX20_00798 0.67 +1.9
835,680 - MPMX20_00798 0.77 +0.7
835,682 - MPMX20_00798 0.77 +0.9
835,682 - MPMX20_00798 0.77 +1.6
835,733 + MPMX20_00798 0.81 +0.2
835,790 + MPMX20_00798 0.85 +1.0
835,828 + MPMX20_00798 0.88 +0.5
835,884 - +0.3
835,884 - -0.7
835,886 + +0.9
835,894 - -0.4
835,899 - -0.7
835,918 - +0.9
836,003 + -0.0
836,033 + +0.2
836,033 + -0.9
836,041 - +0.5
836,088 - MPMX20_00799 0.19 +0.5
836,090 + MPMX20_00799 0.19 -0.5
836,110 + MPMX20_00799 0.24 +0.2
836,110 + MPMX20_00799 0.24 -0.7
836,149 + MPMX20_00799 0.33 +0.2
836,228 + MPMX20_00799 0.51 +0.1
836,248 + MPMX20_00799 0.55 +0.5
836,248 + MPMX20_00799 0.55 +1.0
836,256 - MPMX20_00799 0.57 +0.0
836,261 + MPMX20_00799 0.58 +0.3
836,273 + MPMX20_00799 0.61 -1.0
836,281 - MPMX20_00799 0.63 -1.2
836,385 + MPMX20_00799 0.87 -0.7
836,417 - +3.5
836,417 - -0.8
836,418 + -1.1
836,425 + +0.2
836,437 + +0.1
836,437 + -1.3
836,445 - +0.8
836,472 - -1.2
836,546 + +1.6
836,546 + +0.5
836,546 + +0.2
836,554 - -1.4
836,554 - +0.0
836,653 + +0.0
836,661 - +0.5
836,719 + MPMX20_00800 0.12 -0.8
836,791 + MPMX20_00800 0.20 +1.5
836,799 - MPMX20_00800 0.20 -1.5
836,844 - MPMX20_00800 0.26 -0.0
836,885 - MPMX20_00800 0.30 +0.9
836,888 + MPMX20_00800 0.30 +0.2
836,966 + MPMX20_00800 0.39 -0.2
836,984 - MPMX20_00800 0.41 +0.2

Or see this region's nucleotide sequence