Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00431

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00429 and MPMX20_00430 are separated by 262 nucleotidesMPMX20_00430 and MPMX20_00431 overlap by 4 nucleotidesMPMX20_00431 and MPMX20_00432 are separated by 98 nucleotides MPMX20_00429: MPMX20_00429 - Transcriptional regulatory protein RcsA, at 443,561 to 444,160 _00429 MPMX20_00430: MPMX20_00430 - Guanidinium exporter, at 444,423 to 444,740 _00430 MPMX20_00431: MPMX20_00431 - Outer membrane lipoprotein Blc, at 444,737 to 445,267 _00431 MPMX20_00432: MPMX20_00432 - Beta-lactamase, at 445,366 to 446,511 _00432 Position (kb) 444 445 446Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 443.764 kb on + strand, within MPMX20_00429at 443.764 kb on + strand, within MPMX20_00429at 443.772 kb on + strand, within MPMX20_00429at 443.772 kb on - strand, within MPMX20_00429at 443.803 kb on - strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.816 kb on - strand, within MPMX20_00429at 443.816 kb on - strand, within MPMX20_00429at 443.826 kb on - strand, within MPMX20_00429at 443.826 kb on - strand, within MPMX20_00429at 443.832 kb on + strand, within MPMX20_00429at 443.834 kb on + strand, within MPMX20_00429at 443.842 kb on + strand, within MPMX20_00429at 443.842 kb on + strand, within MPMX20_00429at 443.850 kb on - strand, within MPMX20_00429at 443.850 kb on - strand, within MPMX20_00429at 443.888 kb on + strand, within MPMX20_00429at 443.888 kb on + strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.920 kb on + strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.953 kb on + strand, within MPMX20_00429at 443.962 kb on + strand, within MPMX20_00429at 443.968 kb on - strand, within MPMX20_00429at 443.970 kb on - strand, within MPMX20_00429at 443.971 kb on - strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 444.002 kb on - strand, within MPMX20_00429at 444.002 kb on - strand, within MPMX20_00429at 444.036 kb on - strand, within MPMX20_00429at 444.067 kb on - strand, within MPMX20_00429at 444.106 kb on + strandat 444.114 kb on - strandat 444.122 kb on + strandat 444.184 kb on - strandat 444.200 kb on + strandat 444.205 kb on + strandat 444.224 kb on + strandat 444.242 kb on + strandat 444.242 kb on + strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.271 kb on + strandat 444.287 kb on + strandat 444.290 kb on - strandat 444.344 kb on - strandat 444.361 kb on + strandat 444.370 kb on - strandat 444.377 kb on - strandat 444.390 kb on + strandat 444.430 kb on + strandat 444.463 kb on - strand, within MPMX20_00430at 444.477 kb on + strand, within MPMX20_00430at 444.477 kb on + strand, within MPMX20_00430at 444.478 kb on + strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.496 kb on + strand, within MPMX20_00430at 444.510 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.594 kb on + strand, within MPMX20_00430at 444.698 kb on + strand, within MPMX20_00430at 444.698 kb on + strand, within MPMX20_00430at 444.702 kb on - strand, within MPMX20_00430at 444.725 kb on + strandat 444.748 kb on + strandat 444.748 kb on + strandat 444.748 kb on + strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.758 kb on + strandat 444.772 kb on + strandat 444.772 kb on + strandat 444.780 kb on - strandat 444.780 kb on - strandat 444.829 kb on + strand, within MPMX20_00431at 444.837 kb on - strand, within MPMX20_00431at 444.837 kb on - strand, within MPMX20_00431at 444.860 kb on + strand, within MPMX20_00431at 444.881 kb on - strand, within MPMX20_00431at 444.883 kb on + strand, within MPMX20_00431at 444.891 kb on - strand, within MPMX20_00431at 444.903 kb on - strand, within MPMX20_00431at 444.959 kb on - strand, within MPMX20_00431at 444.984 kb on + strand, within MPMX20_00431at 445.048 kb on + strand, within MPMX20_00431at 445.048 kb on + strand, within MPMX20_00431at 445.048 kb on + strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.101 kb on - strand, within MPMX20_00431at 445.103 kb on - strand, within MPMX20_00431at 445.143 kb on - strand, within MPMX20_00431at 445.188 kb on - strand, within MPMX20_00431at 445.303 kb on - strandat 445.354 kb on + strandat 445.418 kb on + strandat 445.435 kb on + strandat 445.445 kb on - strandat 445.515 kb on + strand, within MPMX20_00432at 445.515 kb on + strand, within MPMX20_00432at 445.544 kb on + strand, within MPMX20_00432at 445.561 kb on + strand, within MPMX20_00432at 445.606 kb on + strand, within MPMX20_00432at 445.642 kb on + strand, within MPMX20_00432at 445.642 kb on + strand, within MPMX20_00432at 445.650 kb on - strand, within MPMX20_00432at 445.650 kb on - strand, within MPMX20_00432at 445.650 kb on - strand, within MPMX20_00432at 445.665 kb on - strand, within MPMX20_00432at 445.702 kb on - strand, within MPMX20_00432at 445.702 kb on - strand, within MPMX20_00432at 445.760 kb on + strand, within MPMX20_00432at 445.768 kb on - strand, within MPMX20_00432at 445.841 kb on + strand, within MPMX20_00432at 445.849 kb on - strand, within MPMX20_00432at 445.849 kb on - strand, within MPMX20_00432at 445.855 kb on - strand, within MPMX20_00432at 445.855 kb on - strand, within MPMX20_00432at 445.861 kb on - strand, within MPMX20_00432at 445.861 kb on - strand, within MPMX20_00432at 445.865 kb on + strand, within MPMX20_00432at 445.880 kb on + strand, within MPMX20_00432at 445.905 kb on - strand, within MPMX20_00432at 445.910 kb on - strand, within MPMX20_00432at 445.936 kb on - strand, within MPMX20_00432at 445.973 kb on + strand, within MPMX20_00432at 445.973 kb on + strand, within MPMX20_00432at 445.973 kb on + strand, within MPMX20_00432at 445.981 kb on - strand, within MPMX20_00432at 445.981 kb on - strand, within MPMX20_00432at 446.112 kb on + strand, within MPMX20_00432at 446.135 kb on - strand, within MPMX20_00432at 446.166 kb on + strand, within MPMX20_00432at 446.166 kb on + strand, within MPMX20_00432at 446.169 kb on - strand, within MPMX20_00432at 446.174 kb on - strand, within MPMX20_00432at 446.174 kb on - strand, within MPMX20_00432at 446.184 kb on - strand, within MPMX20_00432

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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443,764 + MPMX20_00429 0.34 +0.4
443,764 + MPMX20_00429 0.34 -1.1
443,772 + MPMX20_00429 0.35 -0.7
443,772 - MPMX20_00429 0.35 -1.4
443,803 - MPMX20_00429 0.40 -0.9
443,808 + MPMX20_00429 0.41 -1.1
443,808 + MPMX20_00429 0.41 -1.4
443,808 + MPMX20_00429 0.41 +1.7
443,808 + MPMX20_00429 0.41 -0.7
443,808 + MPMX20_00429 0.41 -2.2
443,816 - MPMX20_00429 0.42 -0.5
443,816 - MPMX20_00429 0.42 +0.6
443,826 - MPMX20_00429 0.44 -1.1
443,826 - MPMX20_00429 0.44 +0.1
443,832 + MPMX20_00429 0.45 -1.2
443,834 + MPMX20_00429 0.46 +0.1
443,842 + MPMX20_00429 0.47 -0.4
443,842 + MPMX20_00429 0.47 +0.8
443,850 - MPMX20_00429 0.48 +0.5
443,850 - MPMX20_00429 0.48 -0.8
443,888 + MPMX20_00429 0.55 -0.5
443,888 + MPMX20_00429 0.55 +1.4
443,896 - MPMX20_00429 0.56 +0.1
443,896 - MPMX20_00429 0.56 +0.1
443,896 - MPMX20_00429 0.56 +0.1
443,896 - MPMX20_00429 0.56 +0.8
443,920 + MPMX20_00429 0.60 -1.1
443,946 - MPMX20_00429 0.64 -0.5
443,946 - MPMX20_00429 0.64 +0.0
443,946 - MPMX20_00429 0.64 -0.6
443,953 + MPMX20_00429 0.65 +0.1
443,962 + MPMX20_00429 0.67 +1.7
443,968 - MPMX20_00429 0.68 -0.1
443,970 - MPMX20_00429 0.68 +0.1
443,971 - MPMX20_00429 0.68 +2.2
443,974 + MPMX20_00429 0.69 -0.7
443,974 + MPMX20_00429 0.69 -1.4
443,974 + MPMX20_00429 0.69 +0.5
443,974 + MPMX20_00429 0.69 -0.9
443,974 + MPMX20_00429 0.69 +2.1
443,974 + MPMX20_00429 0.69 +0.4
443,982 - MPMX20_00429 0.70 -0.3
443,982 - MPMX20_00429 0.70 -0.4
443,982 - MPMX20_00429 0.70 +0.8
443,989 + MPMX20_00429 0.71 -1.6
443,989 + MPMX20_00429 0.71 -0.1
443,989 + MPMX20_00429 0.71 -0.6
443,989 + MPMX20_00429 0.71 +1.0
443,994 + MPMX20_00429 0.72 -1.5
443,994 + MPMX20_00429 0.72 -0.8
443,994 + MPMX20_00429 0.72 +1.8
443,994 + MPMX20_00429 0.72 -0.1
443,994 + MPMX20_00429 0.72 -0.5
443,994 + MPMX20_00429 0.72 -0.6
443,994 + MPMX20_00429 0.72 -0.4
443,997 - MPMX20_00429 0.73 -1.3
443,997 - MPMX20_00429 0.73 +0.6
443,997 - MPMX20_00429 0.73 +0.4
443,997 - MPMX20_00429 0.73 -0.2
443,997 - MPMX20_00429 0.73 +0.7
444,002 - MPMX20_00429 0.73 -0.8
444,002 - MPMX20_00429 0.73 +1.4
444,036 - MPMX20_00429 0.79 -1.4
444,067 - MPMX20_00429 0.84 +0.9
444,106 + +0.4
444,114 - -0.4
444,122 + +0.9
444,184 - +0.0
444,200 + +2.4
444,205 + -0.2
444,224 + -0.8
444,242 + -1.3
444,242 + -1.1
444,250 - -1.4
444,250 - -1.5
444,250 - -0.1
444,250 - -0.6
444,271 + -0.2
444,287 + +1.6
444,290 - -0.2
444,344 - +0.4
444,361 + +4.0
444,370 - -0.6
444,377 - -0.3
444,390 + +0.5
444,430 + -1.2
444,463 - MPMX20_00430 0.13 +0.4
444,477 + MPMX20_00430 0.17 -2.9
444,477 + MPMX20_00430 0.17 -0.9
444,478 + MPMX20_00430 0.17 -0.1
444,485 - MPMX20_00430 0.19 -1.2
444,485 - MPMX20_00430 0.19 +0.1
444,485 - MPMX20_00430 0.19 +0.1
444,496 + MPMX20_00430 0.23 +0.3
444,510 + MPMX20_00430 0.27 +0.7
444,520 + MPMX20_00430 0.31 -2.3
444,520 + MPMX20_00430 0.31 +0.4
444,520 + MPMX20_00430 0.31 +0.2
444,520 + MPMX20_00430 0.31 +0.4
444,520 + MPMX20_00430 0.31 -1.7
444,520 + MPMX20_00430 0.31 -2.0
444,520 + MPMX20_00430 0.31 -1.8
444,520 + MPMX20_00430 0.31 -0.2
444,528 - MPMX20_00430 0.33 -1.3
444,528 - MPMX20_00430 0.33 +0.4
444,528 - MPMX20_00430 0.33 -2.1
444,528 - MPMX20_00430 0.33 +0.6
444,528 - MPMX20_00430 0.33 +1.2
444,528 - MPMX20_00430 0.33 -0.7
444,528 - MPMX20_00430 0.33 -2.2
444,528 - MPMX20_00430 0.33 +1.4
444,592 - MPMX20_00430 0.53 -0.9
444,592 - MPMX20_00430 0.53 -1.5
444,592 - MPMX20_00430 0.53 -1.3
444,594 + MPMX20_00430 0.54 +1.4
444,698 + MPMX20_00430 0.86 -1.2
444,698 + MPMX20_00430 0.86 -0.4
444,702 - MPMX20_00430 0.88 -0.5
444,725 + +0.5
444,748 + +0.1
444,748 + +0.6
444,748 + -0.2
444,756 - +1.9
444,756 - +0.5
444,756 - -0.4
444,756 - +0.9
444,756 - -1.6
444,758 + -1.1
444,772 + -2.0
444,772 + +1.2
444,780 - -1.5
444,780 - -2.1
444,829 + MPMX20_00431 0.17 +0.1
444,837 - MPMX20_00431 0.19 +0.4
444,837 - MPMX20_00431 0.19 +2.4
444,860 + MPMX20_00431 0.23 +0.6
444,881 - MPMX20_00431 0.27 +1.7
444,883 + MPMX20_00431 0.27 +0.1
444,891 - MPMX20_00431 0.29 -1.0
444,903 - MPMX20_00431 0.31 -1.7
444,959 - MPMX20_00431 0.42 +0.4
444,984 + MPMX20_00431 0.47 -0.2
445,048 + MPMX20_00431 0.59 +1.4
445,048 + MPMX20_00431 0.59 +3.0
445,048 + MPMX20_00431 0.59 +0.1
445,091 - MPMX20_00431 0.67 -0.4
445,091 - MPMX20_00431 0.67 +0.4
445,091 - MPMX20_00431 0.67 +0.1
445,101 - MPMX20_00431 0.69 +2.2
445,103 - MPMX20_00431 0.69 +0.3
445,143 - MPMX20_00431 0.76 +0.3
445,188 - MPMX20_00431 0.85 +0.1
445,303 - -0.2
445,354 + +0.2
445,418 + -1.2
445,435 + +0.2
445,445 - +2.8
445,515 + MPMX20_00432 0.13 -0.4
445,515 + MPMX20_00432 0.13 -0.2
445,544 + MPMX20_00432 0.16 -0.7
445,561 + MPMX20_00432 0.17 -1.3
445,606 + MPMX20_00432 0.21 -0.5
445,642 + MPMX20_00432 0.24 -1.2
445,642 + MPMX20_00432 0.24 -0.2
445,650 - MPMX20_00432 0.25 -0.4
445,650 - MPMX20_00432 0.25 -2.1
445,650 - MPMX20_00432 0.25 +0.7
445,665 - MPMX20_00432 0.26 +1.7
445,702 - MPMX20_00432 0.29 -1.4
445,702 - MPMX20_00432 0.29 -0.4
445,760 + MPMX20_00432 0.34 +1.4
445,768 - MPMX20_00432 0.35 -0.2
445,841 + MPMX20_00432 0.41 +2.4
445,849 - MPMX20_00432 0.42 -1.6
445,849 - MPMX20_00432 0.42 +0.8
445,855 - MPMX20_00432 0.43 -1.5
445,855 - MPMX20_00432 0.43 -1.3
445,861 - MPMX20_00432 0.43 +0.7
445,861 - MPMX20_00432 0.43 -0.8
445,865 + MPMX20_00432 0.44 -1.1
445,880 + MPMX20_00432 0.45 +0.7
445,905 - MPMX20_00432 0.47 -0.4
445,910 - MPMX20_00432 0.47 +1.4
445,936 - MPMX20_00432 0.50 +2.4
445,973 + MPMX20_00432 0.53 -0.1
445,973 + MPMX20_00432 0.53 +0.6
445,973 + MPMX20_00432 0.53 -1.0
445,981 - MPMX20_00432 0.54 +1.4
445,981 - MPMX20_00432 0.54 -0.6
446,112 + MPMX20_00432 0.65 +0.1
446,135 - MPMX20_00432 0.67 +2.0
446,166 + MPMX20_00432 0.70 +0.1
446,166 + MPMX20_00432 0.70 -0.2
446,169 - MPMX20_00432 0.70 -2.4
446,174 - MPMX20_00432 0.71 -0.4
446,174 - MPMX20_00432 0.71 +0.3
446,184 - MPMX20_00432 0.71 -1.3

Or see this region's nucleotide sequence