Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00368 and MPMX20_00369 are separated by 446 nucleotides MPMX20_00369 and MPMX20_00370 are separated by 90 nucleotides MPMX20_00370 and MPMX20_00371 are separated by 207 nucleotides
MPMX20_00368: MPMX20_00368 - ISKra4 family transposase ISCep1, at 386,182 to 386,787
_00368
MPMX20_00369: MPMX20_00369 - hypothetical protein, at 387,234 to 387,857
_00369
MPMX20_00370: MPMX20_00370 - hypothetical protein, at 387,948 to 388,532
_00370
MPMX20_00371: MPMX20_00371 - putative fimbrial chaperone YraI, at 388,740 to 389,459
_00371
Position (kb) 387
388 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11
12 at 386.237 kb on - strand at 386.237 kb on - strand at 386.252 kb on + strand, within MPMX20_00368 at 386.286 kb on - strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.300 kb on + strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.308 kb on - strand, within MPMX20_00368 at 386.323 kb on + strand, within MPMX20_00368 at 386.324 kb on + strand, within MPMX20_00368 at 386.375 kb on + strand, within MPMX20_00368 at 386.388 kb on - strand, within MPMX20_00368 at 386.396 kb on + strand, within MPMX20_00368 at 386.436 kb on + strand, within MPMX20_00368 at 386.444 kb on - strand, within MPMX20_00368 at 386.466 kb on - strand, within MPMX20_00368 at 386.473 kb on + strand, within MPMX20_00368 at 386.473 kb on + strand, within MPMX20_00368 at 386.517 kb on - strand, within MPMX20_00368 at 386.617 kb on - strand, within MPMX20_00368 at 386.657 kb on + strand, within MPMX20_00368 at 386.657 kb on + strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.665 kb on - strand, within MPMX20_00368 at 386.686 kb on - strand, within MPMX20_00368 at 386.686 kb on - strand, within MPMX20_00368 at 386.686 kb on - strand, within MPMX20_00368 at 386.772 kb on + strand at 386.856 kb on - strand at 386.856 kb on - strand at 386.874 kb on - strand at 386.929 kb on + strand at 386.929 kb on + strand at 386.958 kb on - strand at 386.981 kb on + strand at 386.989 kb on - strand at 387.008 kb on + strand at 387.013 kb on + strand at 387.015 kb on - strand at 387.016 kb on - strand at 387.016 kb on - strand at 387.018 kb on + strand at 387.057 kb on + strand at 387.057 kb on + strand at 387.110 kb on - strand at 387.128 kb on + strand at 387.133 kb on + strand at 387.136 kb on - strand at 387.140 kb on + strand at 387.148 kb on - strand at 387.158 kb on - strand at 387.163 kb on - strand at 387.190 kb on - strand at 387.217 kb on + strand at 387.218 kb on + strand at 387.218 kb on + strand at 387.223 kb on + strand at 387.223 kb on + strand at 387.223 kb on + strand at 387.223 kb on + strand at 387.226 kb on - strand at 387.226 kb on - strand at 387.276 kb on + strand at 387.283 kb on - strand at 387.284 kb on - strand at 387.300 kb on - strand, within MPMX20_00369 at 387.304 kb on - strand, within MPMX20_00369 at 387.318 kb on - strand, within MPMX20_00369 at 387.381 kb on - strand, within MPMX20_00369 at 387.389 kb on + strand, within MPMX20_00369 at 387.397 kb on - strand, within MPMX20_00369 at 387.397 kb on - strand, within MPMX20_00369 at 387.412 kb on + strand, within MPMX20_00369 at 387.441 kb on - strand, within MPMX20_00369 at 387.443 kb on + strand, within MPMX20_00369 at 387.443 kb on + strand, within MPMX20_00369 at 387.451 kb on - strand, within MPMX20_00369 at 387.457 kb on + strand, within MPMX20_00369 at 387.462 kb on + strand, within MPMX20_00369 at 387.464 kb on + strand, within MPMX20_00369 at 387.480 kb on - strand, within MPMX20_00369 at 387.503 kb on + strand, within MPMX20_00369 at 387.504 kb on + strand, within MPMX20_00369 at 387.512 kb on - strand, within MPMX20_00369 at 387.568 kb on + strand, within MPMX20_00369 at 387.573 kb on + strand, within MPMX20_00369 at 387.581 kb on - strand, within MPMX20_00369 at 387.594 kb on + strand, within MPMX20_00369 at 387.678 kb on + strand, within MPMX20_00369 at 387.678 kb on + strand, within MPMX20_00369 at 387.678 kb on + strand, within MPMX20_00369 at 387.678 kb on + strand, within MPMX20_00369 at 387.686 kb on - strand, within MPMX20_00369 at 387.686 kb on - strand, within MPMX20_00369 at 387.686 kb on - strand, within MPMX20_00369 at 387.686 kb on - strand, within MPMX20_00369 at 387.691 kb on - strand, within MPMX20_00369 at 387.707 kb on + strand, within MPMX20_00369 at 387.746 kb on + strand, within MPMX20_00369 at 387.781 kb on - strand, within MPMX20_00369 at 387.786 kb on - strand, within MPMX20_00369 at 387.800 kb on + strand at 387.800 kb on + strand at 387.800 kb on + strand at 387.808 kb on - strand at 387.808 kb on - strand at 387.842 kb on - strand at 387.873 kb on + strand at 387.873 kb on + strand at 387.881 kb on - strand at 387.881 kb on - strand at 387.896 kb on - strand at 387.942 kb on + strand at 387.942 kb on + strand at 387.950 kb on - strand at 387.952 kb on + strand at 387.952 kb on + strand at 387.965 kb on - strand at 387.969 kb on + strand at 388.007 kb on + strand, within MPMX20_00370 at 388.009 kb on - strand, within MPMX20_00370 at 388.015 kb on - strand, within MPMX20_00370 at 388.030 kb on + strand, within MPMX20_00370 at 388.035 kb on + strand, within MPMX20_00370 at 388.038 kb on - strand, within MPMX20_00370 at 388.040 kb on + strand, within MPMX20_00370 at 388.053 kb on - strand, within MPMX20_00370 at 388.065 kb on + strand, within MPMX20_00370 at 388.109 kb on - strand, within MPMX20_00370 at 388.156 kb on + strand, within MPMX20_00370 at 388.164 kb on - strand, within MPMX20_00370 at 388.164 kb on - strand, within MPMX20_00370 at 388.199 kb on + strand, within MPMX20_00370 at 388.199 kb on + strand, within MPMX20_00370 at 388.204 kb on + strand, within MPMX20_00370 at 388.247 kb on + strand, within MPMX20_00370 at 388.254 kb on - strand, within MPMX20_00370 at 388.295 kb on + strand, within MPMX20_00370 at 388.309 kb on - strand, within MPMX20_00370 at 388.354 kb on + strand, within MPMX20_00370 at 388.359 kb on + strand, within MPMX20_00370 at 388.413 kb on - strand, within MPMX20_00370 at 388.413 kb on - strand, within MPMX20_00370 at 388.415 kb on + strand, within MPMX20_00370 at 388.527 kb on + strand at 388.537 kb on + strand at 388.547 kb on - strand at 388.559 kb on - strand at 388.664 kb on + strand at 388.668 kb on - strand at 388.671 kb on + strand at 388.685 kb on + strand at 388.685 kb on + strand at 388.687 kb on - strand at 388.787 kb on + strand at 388.807 kb on - strand at 388.807 kb on - strand at 388.807 kb on - strand at 388.809 kb on + strand at 388.809 kb on + strand at 388.816 kb on + strand, within MPMX20_00371 at 388.817 kb on - strand, within MPMX20_00371 at 388.817 kb on - strand, within MPMX20_00371 at 388.821 kb on + strand, within MPMX20_00371 at 388.842 kb on + strand, within MPMX20_00371 at 388.850 kb on - strand, within MPMX20_00371 at 388.855 kb on - strand, within MPMX20_00371
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 remove 386,237 - +0.3 386,237 - +1.3 386,252 + MPMX20_00368 0.12 +0.8 386,286 - MPMX20_00368 0.17 -1.3 386,300 + MPMX20_00368 0.19 +0.5 386,300 + MPMX20_00368 0.19 +0.1 386,300 + MPMX20_00368 0.19 +2.9 386,300 + MPMX20_00368 0.19 -0.6 386,300 + MPMX20_00368 0.19 +1.4 386,300 + MPMX20_00368 0.19 -0.3 386,300 + MPMX20_00368 0.19 +0.8 386,300 + MPMX20_00368 0.19 -2.3 386,300 + MPMX20_00368 0.19 +1.4 386,308 - MPMX20_00368 0.21 -1.0 386,308 - MPMX20_00368 0.21 -0.8 386,308 - MPMX20_00368 0.21 -0.0 386,308 - MPMX20_00368 0.21 +0.3 386,308 - MPMX20_00368 0.21 -1.6 386,308 - MPMX20_00368 0.21 -0.1 386,323 + MPMX20_00368 0.23 -2.3 386,324 + MPMX20_00368 0.23 +1.5 386,375 + MPMX20_00368 0.32 -0.4 386,388 - MPMX20_00368 0.34 +0.7 386,396 + MPMX20_00368 0.35 -2.1 386,436 + MPMX20_00368 0.42 +0.8 386,444 - MPMX20_00368 0.43 -1.4 386,466 - MPMX20_00368 0.47 -0.6 386,473 + MPMX20_00368 0.48 +0.5 386,473 + MPMX20_00368 0.48 -0.4 386,517 - MPMX20_00368 0.55 -1.1 386,617 - MPMX20_00368 0.72 +2.1 386,657 + MPMX20_00368 0.78 +0.7 386,657 + MPMX20_00368 0.78 -0.1 386,665 - MPMX20_00368 0.80 -0.4 386,665 - MPMX20_00368 0.80 -0.8 386,665 - MPMX20_00368 0.80 -0.4 386,665 - MPMX20_00368 0.80 +0.7 386,665 - MPMX20_00368 0.80 -1.1 386,665 - MPMX20_00368 0.80 +0.1 386,665 - MPMX20_00368 0.80 +1.2 386,665 - MPMX20_00368 0.80 +2.1 386,686 - MPMX20_00368 0.83 -0.7 386,686 - MPMX20_00368 0.83 +1.9 386,686 - MPMX20_00368 0.83 -0.7 386,772 + +1.0 386,856 - -0.4 386,856 - +1.1 386,874 - -1.2 386,929 + +1.1 386,929 + -1.1 386,958 - -0.4 386,981 + -0.2 386,989 - +0.8 387,008 + -2.8 387,013 + +1.2 387,015 - -0.4 387,016 - +0.1 387,016 - -1.0 387,018 + +0.8 387,057 + -0.5 387,057 + +1.4 387,110 - +1.4 387,128 + -0.4 387,133 + +1.4 387,136 - -0.1 387,140 + +0.7 387,148 - -0.4 387,158 - +0.2 387,163 - +0.4 387,190 - -0.9 387,217 + -0.6 387,218 + -1.6 387,218 + -0.2 387,223 + +0.1 387,223 + -0.8 387,223 + +0.1 387,223 + +0.5 387,226 - -1.6 387,226 - +0.1 387,276 + +1.8 387,283 - +0.4 387,284 - +0.9 387,300 - MPMX20_00369 0.11 -1.2 387,304 - MPMX20_00369 0.11 -2.1 387,318 - MPMX20_00369 0.13 +12.6 387,381 - MPMX20_00369 0.24 -1.6 387,389 + MPMX20_00369 0.25 -0.6 387,397 - MPMX20_00369 0.26 +1.8 387,397 - MPMX20_00369 0.26 +1.9 387,412 + MPMX20_00369 0.29 -0.9 387,441 - MPMX20_00369 0.33 +0.1 387,443 + MPMX20_00369 0.33 -0.8 387,443 + MPMX20_00369 0.33 -1.0 387,451 - MPMX20_00369 0.35 +0.6 387,457 + MPMX20_00369 0.36 -0.9 387,462 + MPMX20_00369 0.37 +0.4 387,464 + MPMX20_00369 0.37 +0.8 387,480 - MPMX20_00369 0.39 -0.1 387,503 + MPMX20_00369 0.43 +0.4 387,504 + MPMX20_00369 0.43 +3.0 387,512 - MPMX20_00369 0.45 -0.6 387,568 + MPMX20_00369 0.54 -0.5 387,573 + MPMX20_00369 0.54 -1.5 387,581 - MPMX20_00369 0.56 -1.3 387,594 + MPMX20_00369 0.58 -0.8 387,678 + MPMX20_00369 0.71 -0.8 387,678 + MPMX20_00369 0.71 +1.1 387,678 + MPMX20_00369 0.71 -0.6 387,678 + MPMX20_00369 0.71 +0.2 387,686 - MPMX20_00369 0.72 -0.8 387,686 - MPMX20_00369 0.72 +1.1 387,686 - MPMX20_00369 0.72 +0.3 387,686 - MPMX20_00369 0.72 -0.2 387,691 - MPMX20_00369 0.73 +0.4 387,707 + MPMX20_00369 0.76 -1.5 387,746 + MPMX20_00369 0.82 -1.2 387,781 - MPMX20_00369 0.88 +0.4 387,786 - MPMX20_00369 0.88 +0.1 387,800 + -1.5 387,800 + +1.0 387,800 + -0.4 387,808 - -0.0 387,808 - +0.2 387,842 - -2.2 387,873 + -0.6 387,873 + +0.0 387,881 - -0.1 387,881 - -0.9 387,896 - +1.1 387,942 + +1.2 387,942 + -0.1 387,950 - -1.5 387,952 + -1.1 387,952 + -0.7 387,965 - +2.4 387,969 + +1.1 388,007 + MPMX20_00370 0.10 -1.1 388,009 - MPMX20_00370 0.10 +3.4 388,015 - MPMX20_00370 0.11 -0.6 388,030 + MPMX20_00370 0.14 -0.2 388,035 + MPMX20_00370 0.15 -1.1 388,038 - MPMX20_00370 0.15 -1.9 388,040 + MPMX20_00370 0.16 -0.2 388,053 - MPMX20_00370 0.18 +0.0 388,065 + MPMX20_00370 0.20 +1.7 388,109 - MPMX20_00370 0.28 +2.4 388,156 + MPMX20_00370 0.36 -0.3 388,164 - MPMX20_00370 0.37 -0.3 388,164 - MPMX20_00370 0.37 -0.0 388,199 + MPMX20_00370 0.43 +0.2 388,199 + MPMX20_00370 0.43 -0.9 388,204 + MPMX20_00370 0.44 -0.2 388,247 + MPMX20_00370 0.51 -0.7 388,254 - MPMX20_00370 0.52 +0.1 388,295 + MPMX20_00370 0.59 -2.9 388,309 - MPMX20_00370 0.62 +0.7 388,354 + MPMX20_00370 0.69 -0.6 388,359 + MPMX20_00370 0.70 +1.4 388,413 - MPMX20_00370 0.79 +1.5 388,413 - MPMX20_00370 0.79 -1.4 388,415 + MPMX20_00370 0.80 +0.2 388,527 + +0.0 388,537 + +0.0 388,547 - +1.4 388,559 - -1.7 388,664 + -2.6 388,668 - +1.4 388,671 + +0.3 388,685 + -0.1 388,685 + +2.4 388,687 - -0.2 388,787 + +1.1 388,807 - +0.4 388,807 - +1.8 388,807 - -0.9 388,809 + -2.0 388,809 + -2.1 388,816 + MPMX20_00371 0.11 -0.4 388,817 - MPMX20_00371 0.11 +1.3 388,817 - MPMX20_00371 0.11 -0.7 388,821 + MPMX20_00371 0.11 -0.8 388,842 + MPMX20_00371 0.14 +1.2 388,850 - MPMX20_00371 0.15 -0.1 388,855 - MPMX20_00371 0.16 -0.7
Or see this region's nucleotide sequence