Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00072

Experiment: M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00071 and MPMX20_00072 are separated by 102 nucleotidesMPMX20_00072 and MPMX20_00073 are separated by 99 nucleotidesMPMX20_00073 and MPMX20_00074 are separated by 117 nucleotides MPMX20_00071: MPMX20_00071 - hypothetical protein, at 72,030 to 72,989 _00071 MPMX20_00072: MPMX20_00072 - 5-hydroxyisourate hydrolase, at 73,092 to 73,502 _00072 MPMX20_00073: MPMX20_00073 - HTH-type transcriptional regulator MlrA, at 73,602 to 74,327 _00073 MPMX20_00074: MPMX20_00074 - Outer membrane lipoprotein Blc, at 74,445 to 74,969 _00074 Position (kb) 73 74Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 72.123 kb on + strandat 72.132 kb on - strand, within MPMX20_00071at 72.211 kb on + strand, within MPMX20_00071at 72.221 kb on - strand, within MPMX20_00071at 72.259 kb on + strand, within MPMX20_00071at 72.266 kb on - strand, within MPMX20_00071at 72.295 kb on + strand, within MPMX20_00071at 72.353 kb on + strand, within MPMX20_00071at 72.415 kb on - strand, within MPMX20_00071at 72.447 kb on + strand, within MPMX20_00071at 72.450 kb on + strand, within MPMX20_00071at 72.458 kb on - strand, within MPMX20_00071at 72.488 kb on - strand, within MPMX20_00071at 72.536 kb on + strand, within MPMX20_00071at 72.571 kb on + strand, within MPMX20_00071at 72.571 kb on + strand, within MPMX20_00071at 72.571 kb on + strand, within MPMX20_00071at 72.579 kb on - strand, within MPMX20_00071at 72.579 kb on - strand, within MPMX20_00071at 72.579 kb on - strand, within MPMX20_00071at 72.581 kb on + strand, within MPMX20_00071at 72.589 kb on - strand, within MPMX20_00071at 72.604 kb on - strand, within MPMX20_00071at 72.608 kb on + strand, within MPMX20_00071at 72.785 kb on + strand, within MPMX20_00071at 72.814 kb on - strand, within MPMX20_00071at 72.826 kb on - strand, within MPMX20_00071at 72.840 kb on + strand, within MPMX20_00071at 72.840 kb on + strand, within MPMX20_00071at 72.851 kb on + strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.859 kb on - strand, within MPMX20_00071at 72.880 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.884 kb on + strand, within MPMX20_00071at 72.888 kb on - strand, within MPMX20_00071at 72.894 kb on + strandat 72.902 kb on - strandat 72.984 kb on - strandat 73.169 kb on + strand, within MPMX20_00072at 73.177 kb on - strand, within MPMX20_00072at 73.200 kb on + strand, within MPMX20_00072at 73.229 kb on - strand, within MPMX20_00072at 73.231 kb on - strand, within MPMX20_00072at 73.247 kb on + strand, within MPMX20_00072at 73.256 kb on + strand, within MPMX20_00072at 73.256 kb on + strand, within MPMX20_00072at 73.259 kb on - strand, within MPMX20_00072at 73.277 kb on - strand, within MPMX20_00072at 73.323 kb on - strand, within MPMX20_00072at 73.376 kb on + strand, within MPMX20_00072at 73.378 kb on - strand, within MPMX20_00072at 73.411 kb on - strand, within MPMX20_00072at 73.430 kb on + strand, within MPMX20_00072at 73.454 kb on + strand, within MPMX20_00072at 73.454 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.462 kb on - strandat 73.463 kb on - strandat 73.481 kb on + strandat 73.512 kb on - strandat 73.519 kb on - strandat 73.530 kb on + strandat 73.616 kb on + strandat 73.624 kb on - strandat 73.624 kb on - strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.704 kb on - strand, within MPMX20_00073at 73.779 kb on + strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.821 kb on - strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.887 kb on + strand, within MPMX20_00073at 73.927 kb on - strand, within MPMX20_00073at 73.930 kb on + strand, within MPMX20_00073at 73.975 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.993 kb on - strand, within MPMX20_00073at 73.996 kb on + strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 74.089 kb on - strand, within MPMX20_00073at 74.108 kb on + strand, within MPMX20_00073at 74.128 kb on + strand, within MPMX20_00073at 74.184 kb on + strand, within MPMX20_00073at 74.203 kb on + strand, within MPMX20_00073at 74.208 kb on - strand, within MPMX20_00073at 74.247 kb on + strand, within MPMX20_00073at 74.261 kb on + strandat 74.264 kb on - strandat 74.264 kb on - strandat 74.322 kb on + strandat 74.323 kb on + strandat 74.331 kb on - strandat 74.334 kb on + strandat 74.342 kb on - strandat 74.392 kb on + strandat 74.392 kb on + strandat 74.400 kb on - strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.460 kb on + strandat 74.460 kb on + strandat 74.468 kb on - strandat 74.468 kb on - strandat 74.482 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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72,123 + -0.1
72,132 - MPMX20_00071 0.11 +0.2
72,211 + MPMX20_00071 0.19 +0.4
72,221 - MPMX20_00071 0.20 -0.2
72,259 + MPMX20_00071 0.24 +0.4
72,266 - MPMX20_00071 0.25 +0.4
72,295 + MPMX20_00071 0.28 -1.3
72,353 + MPMX20_00071 0.34 -0.2
72,415 - MPMX20_00071 0.40 +0.1
72,447 + MPMX20_00071 0.43 -0.7
72,450 + MPMX20_00071 0.44 +0.1
72,458 - MPMX20_00071 0.45 -1.5
72,488 - MPMX20_00071 0.48 +1.1
72,536 + MPMX20_00071 0.53 +0.3
72,571 + MPMX20_00071 0.56 +4.0
72,571 + MPMX20_00071 0.56 +0.7
72,571 + MPMX20_00071 0.56 -0.8
72,579 - MPMX20_00071 0.57 +1.2
72,579 - MPMX20_00071 0.57 -1.5
72,579 - MPMX20_00071 0.57 +0.4
72,581 + MPMX20_00071 0.57 -2.0
72,589 - MPMX20_00071 0.58 +1.1
72,604 - MPMX20_00071 0.60 +3.3
72,608 + MPMX20_00071 0.60 -0.9
72,785 + MPMX20_00071 0.79 -0.6
72,814 - MPMX20_00071 0.82 +0.6
72,826 - MPMX20_00071 0.83 +1.4
72,840 + MPMX20_00071 0.84 +0.2
72,840 + MPMX20_00071 0.84 +0.1
72,851 + MPMX20_00071 0.86 -1.0
72,859 - MPMX20_00071 0.86 -1.3
72,859 - MPMX20_00071 0.86 -0.0
72,859 - MPMX20_00071 0.86 -0.5
72,859 - MPMX20_00071 0.86 +0.0
72,859 - MPMX20_00071 0.86 +0.8
72,880 + MPMX20_00071 0.89 -0.8
72,884 + MPMX20_00071 0.89 -0.1
72,884 + MPMX20_00071 0.89 +1.7
72,884 + MPMX20_00071 0.89 +1.0
72,888 - MPMX20_00071 0.89 -0.5
72,894 + +1.0
72,902 - +0.1
72,984 - +0.3
73,169 + MPMX20_00072 0.19 +0.8
73,177 - MPMX20_00072 0.21 +5.1
73,200 + MPMX20_00072 0.26 +0.5
73,229 - MPMX20_00072 0.33 +0.4
73,231 - MPMX20_00072 0.34 +1.4
73,247 + MPMX20_00072 0.38 +1.1
73,256 + MPMX20_00072 0.40 -2.0
73,256 + MPMX20_00072 0.40 -0.9
73,259 - MPMX20_00072 0.41 -0.1
73,277 - MPMX20_00072 0.45 -0.1
73,323 - MPMX20_00072 0.56 +0.4
73,376 + MPMX20_00072 0.69 +0.6
73,378 - MPMX20_00072 0.70 +0.9
73,411 - MPMX20_00072 0.78 -0.4
73,430 + MPMX20_00072 0.82 +1.0
73,454 + MPMX20_00072 0.88 +0.4
73,454 + MPMX20_00072 0.88 +1.4
73,455 + MPMX20_00072 0.88 -0.5
73,455 + MPMX20_00072 0.88 +0.2
73,462 - -2.4
73,463 - +1.4
73,481 + -0.5
73,512 - +0.5
73,519 - +0.5
73,530 + +0.8
73,616 + +1.1
73,624 - +1.4
73,624 - +2.7
73,673 + -0.2
73,673 + -2.0
73,673 + +2.4
73,681 - MPMX20_00073 0.11 +0.4
73,681 - MPMX20_00073 0.11 -0.8
73,681 - MPMX20_00073 0.11 -2.0
73,681 - MPMX20_00073 0.11 -0.4
73,704 - MPMX20_00073 0.14 -0.2
73,779 + MPMX20_00073 0.24 -0.6
73,787 - MPMX20_00073 0.25 +2.4
73,787 - MPMX20_00073 0.25 -0.8
73,787 - MPMX20_00073 0.25 +2.4
73,821 - MPMX20_00073 0.30 -0.0
73,865 + MPMX20_00073 0.36 -1.3
73,865 + MPMX20_00073 0.36 -0.9
73,887 + MPMX20_00073 0.39 -1.0
73,927 - MPMX20_00073 0.45 -1.0
73,930 + MPMX20_00073 0.45 +0.6
73,975 + MPMX20_00073 0.51 +1.1
73,985 + MPMX20_00073 0.53 -1.3
73,985 + MPMX20_00073 0.53 -0.8
73,990 + MPMX20_00073 0.53 -3.3
73,990 + MPMX20_00073 0.53 +0.2
73,990 + MPMX20_00073 0.53 +1.7
73,990 + MPMX20_00073 0.53 -1.2
73,990 + MPMX20_00073 0.53 +0.8
73,993 - MPMX20_00073 0.54 -1.2
73,996 + MPMX20_00073 0.54 -1.0
73,998 - MPMX20_00073 0.55 -0.4
73,998 - MPMX20_00073 0.55 -0.6
73,998 - MPMX20_00073 0.55 -0.6
73,998 - MPMX20_00073 0.55 -0.4
74,089 - MPMX20_00073 0.67 +0.1
74,108 + MPMX20_00073 0.70 -0.5
74,128 + MPMX20_00073 0.72 -0.3
74,184 + MPMX20_00073 0.80 -0.3
74,203 + MPMX20_00073 0.83 -0.8
74,208 - MPMX20_00073 0.83 -1.0
74,247 + MPMX20_00073 0.89 -0.2
74,261 + +0.6
74,264 - +0.4
74,264 - -1.2
74,322 + -1.8
74,323 + +0.8
74,331 - -0.6
74,334 + -2.2
74,342 - +0.8
74,392 + +0.4
74,392 + +1.8
74,400 - +3.4
74,402 + +0.8
74,402 + -1.0
74,402 + +1.4
74,402 + -0.3
74,402 + +1.2
74,460 + -0.4
74,460 + -0.2
74,468 - +1.8
74,468 - +0.8
74,482 + -0.7

Or see this region's nucleotide sequence