Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01445

Experiment: 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01443 and MPMX20_01444 are separated by 354 nucleotidesMPMX20_01444 and MPMX20_01445 are separated by 95 nucleotidesMPMX20_01445 and MPMX20_01446 are separated by 283 nucleotidesMPMX20_01446 and MPMX20_01447 are separated by 183 nucleotides MPMX20_01443: MPMX20_01443 - Threonine/homoserine exporter RhtA, at 1,506,402 to 1,507,289 _01443 MPMX20_01444: MPMX20_01444 - Outer membrane protein X, at 1,507,644 to 1,508,162 _01444 MPMX20_01445: MPMX20_01445 - Phosphoethanolamine transferase OpgE, at 1,508,258 to 1,509,841 _01445 MPMX20_01446: MPMX20_01446 - Small protein MntS, at 1,510,125 to 1,510,256 _01446 MPMX20_01447: MPMX20_01447 - Transcriptional regulator MntR, at 1,510,440 to 1,510,913 _01447 Position (kb) 1508 1509 1510Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1507.275 kb on + strandat 1507.275 kb on + strandat 1507.275 kb on + strandat 1507.283 kb on - strandat 1507.283 kb on - strandat 1507.283 kb on - strandat 1507.332 kb on + strandat 1507.435 kb on + strandat 1507.457 kb on + strandat 1507.480 kb on - strandat 1507.630 kb on + strandat 1507.630 kb on + strandat 1507.630 kb on + strandat 1507.630 kb on + strandat 1507.638 kb on - strandat 1507.638 kb on - strandat 1507.638 kb on - strandat 1507.638 kb on - strandat 1507.688 kb on - strandat 1507.772 kb on + strand, within MPMX20_01444at 1507.887 kb on + strand, within MPMX20_01444at 1507.887 kb on + strand, within MPMX20_01444at 1507.895 kb on - strand, within MPMX20_01444at 1507.900 kb on - strand, within MPMX20_01444at 1507.906 kb on + strand, within MPMX20_01444at 1507.919 kb on - strand, within MPMX20_01444at 1508.011 kb on - strand, within MPMX20_01444at 1508.019 kb on - strand, within MPMX20_01444at 1508.057 kb on - strand, within MPMX20_01444at 1508.100 kb on - strand, within MPMX20_01444at 1508.237 kb on - strandat 1508.239 kb on + strandat 1508.239 kb on + strandat 1508.247 kb on - strandat 1508.247 kb on - strandat 1508.247 kb on - strandat 1508.340 kb on + strandat 1508.354 kb on - strandat 1508.354 kb on - strandat 1508.420 kb on + strand, within MPMX20_01445at 1508.507 kb on + strand, within MPMX20_01445at 1508.537 kb on + strand, within MPMX20_01445at 1508.545 kb on + strand, within MPMX20_01445at 1508.545 kb on - strand, within MPMX20_01445at 1508.647 kb on - strand, within MPMX20_01445at 1508.687 kb on - strand, within MPMX20_01445at 1508.688 kb on + strand, within MPMX20_01445at 1508.688 kb on + strand, within MPMX20_01445at 1508.743 kb on + strand, within MPMX20_01445at 1508.743 kb on + strand, within MPMX20_01445at 1508.751 kb on - strand, within MPMX20_01445at 1508.751 kb on - strand, within MPMX20_01445at 1508.939 kb on - strand, within MPMX20_01445at 1508.960 kb on + strand, within MPMX20_01445at 1508.960 kb on + strand, within MPMX20_01445at 1509.034 kb on + strand, within MPMX20_01445at 1509.042 kb on - strand, within MPMX20_01445at 1509.055 kb on + strand, within MPMX20_01445at 1509.096 kb on + strand, within MPMX20_01445at 1509.118 kb on - strand, within MPMX20_01445at 1509.133 kb on - strand, within MPMX20_01445at 1509.174 kb on + strand, within MPMX20_01445at 1509.192 kb on - strand, within MPMX20_01445at 1509.200 kb on - strand, within MPMX20_01445at 1509.222 kb on + strand, within MPMX20_01445at 1509.285 kb on - strand, within MPMX20_01445at 1509.317 kb on - strand, within MPMX20_01445at 1509.357 kb on - strand, within MPMX20_01445at 1509.362 kb on - strand, within MPMX20_01445at 1509.362 kb on - strand, within MPMX20_01445at 1509.394 kb on - strand, within MPMX20_01445at 1509.416 kb on - strand, within MPMX20_01445at 1509.493 kb on - strand, within MPMX20_01445at 1509.544 kb on + strand, within MPMX20_01445at 1509.552 kb on - strand, within MPMX20_01445at 1509.552 kb on - strand, within MPMX20_01445at 1509.576 kb on + strand, within MPMX20_01445at 1509.584 kb on - strand, within MPMX20_01445at 1509.594 kb on + strand, within MPMX20_01445at 1509.602 kb on - strand, within MPMX20_01445at 1509.602 kb on - strand, within MPMX20_01445at 1509.602 kb on - strand, within MPMX20_01445at 1509.607 kb on - strand, within MPMX20_01445at 1509.701 kb on + strandat 1509.709 kb on - strandat 1509.714 kb on + strandat 1509.714 kb on + strandat 1509.719 kb on + strandat 1509.722 kb on - strandat 1509.722 kb on - strandat 1509.722 kb on - strandat 1509.724 kb on + strandat 1509.724 kb on + strandat 1509.732 kb on - strandat 1509.732 kb on - strandat 1509.732 kb on - strandat 1509.781 kb on - strandat 1509.790 kb on + strandat 1509.798 kb on - strandat 1509.811 kb on - strandat 1509.817 kb on - strandat 1509.844 kb on - strandat 1509.870 kb on + strandat 1509.889 kb on - strandat 1509.890 kb on + strandat 1509.891 kb on + strandat 1509.891 kb on + strandat 1509.891 kb on + strandat 1509.898 kb on - strandat 1509.899 kb on - strandat 1509.901 kb on + strandat 1509.901 kb on + strandat 1509.909 kb on - strandat 1509.930 kb on - strandat 1509.962 kb on - strandat 1509.975 kb on - strandat 1510.022 kb on - strandat 1510.062 kb on + strandat 1510.116 kb on - strandat 1510.121 kb on - strandat 1510.128 kb on + strandat 1510.136 kb on - strandat 1510.149 kb on + strand, within MPMX20_01446at 1510.151 kb on - strand, within MPMX20_01446at 1510.185 kb on + strand, within MPMX20_01446at 1510.295 kb on - strandat 1510.332 kb on - strandat 1510.379 kb on + strandat 1510.435 kb on + strandat 1510.435 kb on + strandat 1510.513 kb on - strand, within MPMX20_01447at 1510.541 kb on - strand, within MPMX20_01447at 1510.548 kb on - strand, within MPMX20_01447at 1510.548 kb on - strand, within MPMX20_01447at 1510.561 kb on + strand, within MPMX20_01447at 1510.678 kb on + strand, within MPMX20_01447at 1510.678 kb on + strand, within MPMX20_01447at 1510.678 kb on + strand, within MPMX20_01447at 1510.686 kb on - strand, within MPMX20_01447at 1510.740 kb on - strand, within MPMX20_01447at 1510.751 kb on - strand, within MPMX20_01447

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046
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1,507,275 + -1.9
1,507,275 + -0.4
1,507,275 + -0.9
1,507,283 - -0.7
1,507,283 - -0.3
1,507,283 - +0.3
1,507,332 + -2.1
1,507,435 + +0.7
1,507,457 + +0.0
1,507,480 - +0.4
1,507,630 + -0.9
1,507,630 + +0.8
1,507,630 + +1.6
1,507,630 + -0.1
1,507,638 - +0.3
1,507,638 - +0.3
1,507,638 - +0.8
1,507,638 - +0.2
1,507,688 - -1.7
1,507,772 + MPMX20_01444 0.25 -0.6
1,507,887 + MPMX20_01444 0.47 +0.1
1,507,887 + MPMX20_01444 0.47 -2.1
1,507,895 - MPMX20_01444 0.48 +1.6
1,507,900 - MPMX20_01444 0.49 +0.1
1,507,906 + MPMX20_01444 0.50 +3.9
1,507,919 - MPMX20_01444 0.53 -2.8
1,508,011 - MPMX20_01444 0.71 +0.1
1,508,019 - MPMX20_01444 0.72 -0.8
1,508,057 - MPMX20_01444 0.80 -1.3
1,508,100 - MPMX20_01444 0.88 +0.2
1,508,237 - -2.5
1,508,239 + -0.0
1,508,239 + -0.2
1,508,247 - +0.4
1,508,247 - -1.7
1,508,247 - -1.6
1,508,340 + +0.1
1,508,354 - -0.2
1,508,354 - -0.3
1,508,420 + MPMX20_01445 0.10 -0.7
1,508,507 + MPMX20_01445 0.16 +4.3
1,508,537 + MPMX20_01445 0.18 -0.7
1,508,545 + MPMX20_01445 0.18 -3.2
1,508,545 - MPMX20_01445 0.18 +1.3
1,508,647 - MPMX20_01445 0.25 -0.8
1,508,687 - MPMX20_01445 0.27 +1.5
1,508,688 + MPMX20_01445 0.27 -0.3
1,508,688 + MPMX20_01445 0.27 -1.5
1,508,743 + MPMX20_01445 0.31 +0.5
1,508,743 + MPMX20_01445 0.31 +0.7
1,508,751 - MPMX20_01445 0.31 -0.8
1,508,751 - MPMX20_01445 0.31 +1.4
1,508,939 - MPMX20_01445 0.43 -0.2
1,508,960 + MPMX20_01445 0.44 +1.1
1,508,960 + MPMX20_01445 0.44 -1.1
1,509,034 + MPMX20_01445 0.49 +2.0
1,509,042 - MPMX20_01445 0.49 +0.5
1,509,055 + MPMX20_01445 0.50 +0.4
1,509,096 + MPMX20_01445 0.53 +0.5
1,509,118 - MPMX20_01445 0.54 -0.6
1,509,133 - MPMX20_01445 0.55 +1.2
1,509,174 + MPMX20_01445 0.58 +0.1
1,509,192 - MPMX20_01445 0.59 +1.4
1,509,200 - MPMX20_01445 0.59 +1.9
1,509,222 + MPMX20_01445 0.61 -0.5
1,509,285 - MPMX20_01445 0.65 +0.7
1,509,317 - MPMX20_01445 0.67 +0.6
1,509,357 - MPMX20_01445 0.69 +0.7
1,509,362 - MPMX20_01445 0.70 +2.9
1,509,362 - MPMX20_01445 0.70 -1.1
1,509,394 - MPMX20_01445 0.72 +2.3
1,509,416 - MPMX20_01445 0.73 +0.1
1,509,493 - MPMX20_01445 0.78 -1.4
1,509,544 + MPMX20_01445 0.81 +0.2
1,509,552 - MPMX20_01445 0.82 +2.8
1,509,552 - MPMX20_01445 0.82 -1.8
1,509,576 + MPMX20_01445 0.83 +0.6
1,509,584 - MPMX20_01445 0.84 +1.1
1,509,594 + MPMX20_01445 0.84 -1.4
1,509,602 - MPMX20_01445 0.85 +1.6
1,509,602 - MPMX20_01445 0.85 +0.4
1,509,602 - MPMX20_01445 0.85 +1.9
1,509,607 - MPMX20_01445 0.85 +0.2
1,509,701 + +0.4
1,509,709 - -1.0
1,509,714 + +0.1
1,509,714 + +1.3
1,509,719 + +1.1
1,509,722 - +0.8
1,509,722 - +0.4
1,509,722 - -0.6
1,509,724 + +0.2
1,509,724 + +0.1
1,509,732 - -0.3
1,509,732 - +0.1
1,509,732 - +0.7
1,509,781 - -2.4
1,509,790 + +0.8
1,509,798 - -1.5
1,509,811 - -1.3
1,509,817 - +0.0
1,509,844 - +0.7
1,509,870 + +1.1
1,509,889 - +0.1
1,509,890 + +0.9
1,509,891 + -0.3
1,509,891 + -0.9
1,509,891 + +0.2
1,509,898 - +1.1
1,509,899 - +0.6
1,509,901 + -1.9
1,509,901 + -2.6
1,509,909 - +0.7
1,509,930 - +0.1
1,509,962 - -0.5
1,509,975 - +0.7
1,510,022 - -0.9
1,510,062 + -0.3
1,510,116 - -0.9
1,510,121 - +0.7
1,510,128 + +0.2
1,510,136 - -0.4
1,510,149 + MPMX20_01446 0.18 -0.7
1,510,151 - MPMX20_01446 0.20 +0.1
1,510,185 + MPMX20_01446 0.45 -0.3
1,510,295 - -0.3
1,510,332 - +1.7
1,510,379 + -1.2
1,510,435 + -0.4
1,510,435 + -0.1
1,510,513 - MPMX20_01447 0.15 -0.2
1,510,541 - MPMX20_01447 0.21 -0.4
1,510,548 - MPMX20_01447 0.23 +1.7
1,510,548 - MPMX20_01447 0.23 -0.1
1,510,561 + MPMX20_01447 0.26 -2.3
1,510,678 + MPMX20_01447 0.50 +1.6
1,510,678 + MPMX20_01447 0.50 +0.8
1,510,678 + MPMX20_01447 0.50 +1.0
1,510,686 - MPMX20_01447 0.52 -1.5
1,510,740 - MPMX20_01447 0.63 -0.2
1,510,751 - MPMX20_01447 0.66 -0.2

Or see this region's nucleotide sequence