Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03831

Experiment: TSB plate, 1:1 coculture with Rhizobium pusense TBS_045

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03830 and MPMX20_03831 overlap by 11 nucleotidesMPMX20_03831 and MPMX20_03832 are separated by 49 nucleotides MPMX20_03830: MPMX20_03830 - Sensor histidine kinase CitA, at 4,031,932 to 4,033,557 _03830 MPMX20_03831: MPMX20_03831 - Transcriptional regulatory protein CitB, at 4,033,547 to 4,034,239 _03831 MPMX20_03832: MPMX20_03832 - Constitutive ornithine decarboxylase, at 4,034,289 to 4,036,424 _03832 Position (kb) 4033 4034 4035Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 4032.595 kb on - strand, within MPMX20_03830at 4032.636 kb on + strand, within MPMX20_03830at 4032.677 kb on + strand, within MPMX20_03830at 4032.677 kb on + strand, within MPMX20_03830at 4032.685 kb on - strand, within MPMX20_03830at 4032.721 kb on + strand, within MPMX20_03830at 4032.724 kb on - strand, within MPMX20_03830at 4032.729 kb on - strand, within MPMX20_03830at 4032.736 kb on + strand, within MPMX20_03830at 4032.788 kb on + strand, within MPMX20_03830at 4032.788 kb on + strand, within MPMX20_03830at 4032.796 kb on - strand, within MPMX20_03830at 4032.895 kb on - strand, within MPMX20_03830at 4032.904 kb on + strand, within MPMX20_03830at 4032.911 kb on - strand, within MPMX20_03830at 4032.911 kb on - strand, within MPMX20_03830at 4032.911 kb on - strand, within MPMX20_03830at 4032.912 kb on - strand, within MPMX20_03830at 4032.916 kb on + strand, within MPMX20_03830at 4032.963 kb on - strand, within MPMX20_03830at 4033.036 kb on + strand, within MPMX20_03830at 4033.037 kb on + strand, within MPMX20_03830at 4033.037 kb on + strand, within MPMX20_03830at 4033.039 kb on + strand, within MPMX20_03830at 4033.076 kb on + strand, within MPMX20_03830at 4033.084 kb on - strand, within MPMX20_03830at 4033.084 kb on - strand, within MPMX20_03830at 4033.085 kb on + strand, within MPMX20_03830at 4033.101 kb on + strand, within MPMX20_03830at 4033.109 kb on - strand, within MPMX20_03830at 4033.125 kb on + strand, within MPMX20_03830at 4033.142 kb on + strand, within MPMX20_03830at 4033.142 kb on + strand, within MPMX20_03830at 4033.185 kb on + strand, within MPMX20_03830at 4033.185 kb on + strand, within MPMX20_03830at 4033.195 kb on - strand, within MPMX20_03830at 4033.211 kb on + strand, within MPMX20_03830at 4033.232 kb on - strand, within MPMX20_03830at 4033.238 kb on + strand, within MPMX20_03830at 4033.262 kb on + strand, within MPMX20_03830at 4033.262 kb on + strand, within MPMX20_03830at 4033.262 kb on + strand, within MPMX20_03830at 4033.268 kb on - strand, within MPMX20_03830at 4033.268 kb on - strand, within MPMX20_03830at 4033.270 kb on - strand, within MPMX20_03830at 4033.270 kb on - strand, within MPMX20_03830at 4033.270 kb on - strand, within MPMX20_03830at 4033.270 kb on - strand, within MPMX20_03830at 4033.306 kb on - strand, within MPMX20_03830at 4033.405 kb on - strandat 4033.411 kb on + strandat 4033.412 kb on + strandat 4033.424 kb on - strandat 4033.433 kb on + strandat 4033.443 kb on + strandat 4033.443 kb on + strandat 4033.443 kb on + strandat 4033.443 kb on + strandat 4033.443 kb on + strandat 4033.443 kb on + strandat 4033.451 kb on - strandat 4033.451 kb on - strandat 4033.484 kb on + strandat 4033.500 kb on + strandat 4033.508 kb on - strandat 4033.508 kb on - strandat 4033.650 kb on + strand, within MPMX20_03831at 4033.678 kb on + strand, within MPMX20_03831at 4033.706 kb on - strand, within MPMX20_03831at 4033.743 kb on + strand, within MPMX20_03831at 4033.745 kb on - strand, within MPMX20_03831at 4033.756 kb on - strand, within MPMX20_03831at 4033.766 kb on + strand, within MPMX20_03831at 4033.770 kb on - strand, within MPMX20_03831at 4033.881 kb on - strand, within MPMX20_03831at 4033.886 kb on + strand, within MPMX20_03831at 4034.023 kb on - strand, within MPMX20_03831at 4034.047 kb on + strand, within MPMX20_03831at 4034.068 kb on - strand, within MPMX20_03831at 4034.099 kb on + strand, within MPMX20_03831at 4034.115 kb on - strand, within MPMX20_03831at 4034.142 kb on + strand, within MPMX20_03831at 4034.142 kb on + strand, within MPMX20_03831at 4034.142 kb on + strand, within MPMX20_03831at 4034.144 kb on + strand, within MPMX20_03831at 4034.150 kb on - strand, within MPMX20_03831at 4034.150 kb on - strand, within MPMX20_03831at 4034.150 kb on - strand, within MPMX20_03831at 4034.152 kb on - strand, within MPMX20_03831at 4034.152 kb on - strand, within MPMX20_03831at 4034.175 kb on + strandat 4034.240 kb on + strandat 4034.248 kb on - strandat 4034.305 kb on - strandat 4034.323 kb on - strandat 4034.390 kb on - strandat 4034.436 kb on - strandat 4034.454 kb on + strandat 4034.515 kb on - strand, within MPMX20_03832at 4034.524 kb on + strand, within MPMX20_03832at 4034.603 kb on + strand, within MPMX20_03832at 4034.639 kb on + strand, within MPMX20_03832at 4034.653 kb on - strand, within MPMX20_03832at 4034.662 kb on - strand, within MPMX20_03832at 4034.677 kb on - strand, within MPMX20_03832at 4034.723 kb on - strand, within MPMX20_03832at 4034.921 kb on + strand, within MPMX20_03832at 4034.953 kb on + strand, within MPMX20_03832at 4034.963 kb on + strand, within MPMX20_03832at 4034.971 kb on - strand, within MPMX20_03832at 4034.977 kb on + strand, within MPMX20_03832at 4035.000 kb on + strand, within MPMX20_03832at 4035.010 kb on - strand, within MPMX20_03832at 4035.010 kb on - strand, within MPMX20_03832at 4035.010 kb on - strand, within MPMX20_03832at 4035.010 kb on - strand, within MPMX20_03832at 4035.037 kb on - strand, within MPMX20_03832at 4035.170 kb on + strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832at 4035.178 kb on - strand, within MPMX20_03832

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Rhizobium pusense TBS_045
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4,032,595 - MPMX20_03830 0.41 -0.3
4,032,636 + MPMX20_03830 0.43 -0.5
4,032,677 + MPMX20_03830 0.46 +0.4
4,032,677 + MPMX20_03830 0.46 +0.1
4,032,685 - MPMX20_03830 0.46 +0.5
4,032,721 + MPMX20_03830 0.49 +1.4
4,032,724 - MPMX20_03830 0.49 +0.3
4,032,729 - MPMX20_03830 0.49 -0.2
4,032,736 + MPMX20_03830 0.49 -1.2
4,032,788 + MPMX20_03830 0.53 -2.0
4,032,788 + MPMX20_03830 0.53 +1.8
4,032,796 - MPMX20_03830 0.53 -1.3
4,032,895 - MPMX20_03830 0.59 +0.5
4,032,904 + MPMX20_03830 0.60 +0.6
4,032,911 - MPMX20_03830 0.60 +0.1
4,032,911 - MPMX20_03830 0.60 -0.9
4,032,911 - MPMX20_03830 0.60 +0.5
4,032,912 - MPMX20_03830 0.60 -2.5
4,032,916 + MPMX20_03830 0.61 +0.7
4,032,963 - MPMX20_03830 0.63 -0.8
4,033,036 + MPMX20_03830 0.68 -0.9
4,033,037 + MPMX20_03830 0.68 -2.5
4,033,037 + MPMX20_03830 0.68 -0.1
4,033,039 + MPMX20_03830 0.68 -0.8
4,033,076 + MPMX20_03830 0.70 -2.0
4,033,084 - MPMX20_03830 0.71 -0.1
4,033,084 - MPMX20_03830 0.71 -2.8
4,033,085 + MPMX20_03830 0.71 -1.1
4,033,101 + MPMX20_03830 0.72 -1.9
4,033,109 - MPMX20_03830 0.72 +1.6
4,033,125 + MPMX20_03830 0.73 +1.2
4,033,142 + MPMX20_03830 0.74 -0.4
4,033,142 + MPMX20_03830 0.74 +0.8
4,033,185 + MPMX20_03830 0.77 -0.5
4,033,185 + MPMX20_03830 0.77 +0.1
4,033,195 - MPMX20_03830 0.78 +2.4
4,033,211 + MPMX20_03830 0.79 -0.0
4,033,232 - MPMX20_03830 0.80 -0.1
4,033,238 + MPMX20_03830 0.80 -0.4
4,033,262 + MPMX20_03830 0.82 -0.2
4,033,262 + MPMX20_03830 0.82 -1.9
4,033,262 + MPMX20_03830 0.82 +0.3
4,033,268 - MPMX20_03830 0.82 -0.1
4,033,268 - MPMX20_03830 0.82 +0.1
4,033,270 - MPMX20_03830 0.82 -0.0
4,033,270 - MPMX20_03830 0.82 +3.2
4,033,270 - MPMX20_03830 0.82 -0.6
4,033,270 - MPMX20_03830 0.82 -0.9
4,033,306 - MPMX20_03830 0.85 +1.6
4,033,405 - -1.3
4,033,411 + -1.9
4,033,412 + +1.0
4,033,424 - +0.3
4,033,433 + -1.5
4,033,443 + +0.4
4,033,443 + -0.7
4,033,443 + +0.4
4,033,443 + +1.2
4,033,443 + +1.4
4,033,443 + -0.2
4,033,451 - +0.9
4,033,451 - -0.6
4,033,484 + -0.2
4,033,500 + -0.6
4,033,508 - -2.0
4,033,508 - -0.9
4,033,650 + MPMX20_03831 0.15 +0.2
4,033,678 + MPMX20_03831 0.19 +0.4
4,033,706 - MPMX20_03831 0.23 +0.6
4,033,743 + MPMX20_03831 0.28 +0.4
4,033,745 - MPMX20_03831 0.29 -0.9
4,033,756 - MPMX20_03831 0.30 +0.4
4,033,766 + MPMX20_03831 0.32 +0.6
4,033,770 - MPMX20_03831 0.32 -0.6
4,033,881 - MPMX20_03831 0.48 -0.1
4,033,886 + MPMX20_03831 0.49 +0.1
4,034,023 - MPMX20_03831 0.69 -1.6
4,034,047 + MPMX20_03831 0.72 +0.1
4,034,068 - MPMX20_03831 0.75 +1.4
4,034,099 + MPMX20_03831 0.80 -1.6
4,034,115 - MPMX20_03831 0.82 +1.8
4,034,142 + MPMX20_03831 0.86 +2.1
4,034,142 + MPMX20_03831 0.86 +1.1
4,034,142 + MPMX20_03831 0.86 +3.4
4,034,144 + MPMX20_03831 0.86 -1.8
4,034,150 - MPMX20_03831 0.87 +1.1
4,034,150 - MPMX20_03831 0.87 +2.4
4,034,150 - MPMX20_03831 0.87 -2.0
4,034,152 - MPMX20_03831 0.87 +0.6
4,034,152 - MPMX20_03831 0.87 +1.7
4,034,175 + +0.3
4,034,240 + -0.3
4,034,248 - -0.8
4,034,305 - +0.0
4,034,323 - +0.8
4,034,390 - -2.0
4,034,436 - +0.3
4,034,454 + -0.2
4,034,515 - MPMX20_03832 0.11 -0.4
4,034,524 + MPMX20_03832 0.11 -1.2
4,034,603 + MPMX20_03832 0.15 -0.8
4,034,639 + MPMX20_03832 0.16 +0.4
4,034,653 - MPMX20_03832 0.17 -1.6
4,034,662 - MPMX20_03832 0.17 -2.6
4,034,677 - MPMX20_03832 0.18 -1.6
4,034,723 - MPMX20_03832 0.20 +0.1
4,034,921 + MPMX20_03832 0.30 -1.0
4,034,953 + MPMX20_03832 0.31 +0.1
4,034,963 + MPMX20_03832 0.32 -0.7
4,034,971 - MPMX20_03832 0.32 -1.0
4,034,977 + MPMX20_03832 0.32 +1.2
4,035,000 + MPMX20_03832 0.33 -0.3
4,035,010 - MPMX20_03832 0.34 +0.1
4,035,010 - MPMX20_03832 0.34 -0.6
4,035,010 - MPMX20_03832 0.34 +0.1
4,035,010 - MPMX20_03832 0.34 +4.0
4,035,037 - MPMX20_03832 0.35 +0.0
4,035,170 + MPMX20_03832 0.41 +0.1
4,035,178 - MPMX20_03832 0.42 -0.8
4,035,178 - MPMX20_03832 0.42 +5.3
4,035,178 - MPMX20_03832 0.42 -1.1
4,035,178 - MPMX20_03832 0.42 +1.4
4,035,178 - MPMX20_03832 0.42 -0.2
4,035,178 - MPMX20_03832 0.42 -0.2
4,035,178 - MPMX20_03832 0.42 -0.5

Or see this region's nucleotide sequence