Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04079

Experiment: 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04077 and MPMX20_04078 are separated by 165 nucleotidesMPMX20_04078 and MPMX20_04079 are separated by 9 nucleotidesMPMX20_04079 and MPMX20_04080 are separated by 223 nucleotides MPMX20_04077: MPMX20_04077 - Argininosuccinate synthase, at 4,275,190 to 4,276,536 _04077 MPMX20_04078: MPMX20_04078 - tRNA-Leu, at 4,276,702 to 4,276,788 _04078 MPMX20_04079: MPMX20_04079 - Protein-export membrane protein SecG, at 4,276,798 to 4,277,130 _04079 MPMX20_04080: MPMX20_04080 - Phosphoglucosamine mutase, at 4,277,354 to 4,278,691 _04080 Position (kb) 4276 4277 4278Strain fitness (log2 ratio) -2 -1 0 1 2at 4275.799 kb on + strand, within MPMX20_04077at 4275.934 kb on - strand, within MPMX20_04077at 4275.980 kb on - strand, within MPMX20_04077at 4276.008 kb on + strand, within MPMX20_04077at 4276.076 kb on + strand, within MPMX20_04077at 4276.084 kb on + strand, within MPMX20_04077at 4276.144 kb on - strand, within MPMX20_04077at 4276.152 kb on + strand, within MPMX20_04077at 4276.185 kb on - strand, within MPMX20_04077at 4276.193 kb on - strand, within MPMX20_04077at 4276.211 kb on + strand, within MPMX20_04077at 4276.221 kb on + strand, within MPMX20_04077at 4276.221 kb on + strand, within MPMX20_04077at 4276.271 kb on + strand, within MPMX20_04077at 4276.352 kb on - strand, within MPMX20_04077at 4276.470 kb on + strandat 4276.511 kb on - strandat 4276.523 kb on + strandat 4276.795 kb on - strandat 4276.797 kb on - strandat 4277.027 kb on - strand, within MPMX20_04079at 4277.074 kb on - strand, within MPMX20_04079at 4277.267 kb on - strandat 4277.369 kb on - strandat 4277.384 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075
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4,275,799 + MPMX20_04077 0.45 +0.4
4,275,934 - MPMX20_04077 0.55 -0.2
4,275,980 - MPMX20_04077 0.59 -0.2
4,276,008 + MPMX20_04077 0.61 -1.5
4,276,076 + MPMX20_04077 0.66 +0.2
4,276,084 + MPMX20_04077 0.66 +1.2
4,276,144 - MPMX20_04077 0.71 -0.4
4,276,152 + MPMX20_04077 0.71 -0.9
4,276,185 - MPMX20_04077 0.74 +0.4
4,276,193 - MPMX20_04077 0.74 +0.7
4,276,211 + MPMX20_04077 0.76 -0.8
4,276,221 + MPMX20_04077 0.77 -0.8
4,276,221 + MPMX20_04077 0.77 -0.2
4,276,271 + MPMX20_04077 0.80 +0.5
4,276,352 - MPMX20_04077 0.86 +0.8
4,276,470 + +0.8
4,276,511 - +0.8
4,276,523 + +1.9
4,276,795 - -2.5
4,276,797 - -2.5
4,277,027 - MPMX20_04079 0.69 +0.5
4,277,074 - MPMX20_04079 0.83 -2.6
4,277,267 - +2.0
4,277,369 - -2.6
4,277,384 - +1.4

Or see this region's nucleotide sequence