Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02130

Experiment: 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02129 and MPMX20_02130 are separated by 51 nucleotidesMPMX20_02130 and MPMX20_02131 are separated by 219 nucleotides MPMX20_02129: MPMX20_02129 - Soluble epoxide hydrolase, at 2,217,731 to 2,218,636 _02129 MPMX20_02130: MPMX20_02130 - HTH-type transcriptional repressor ComR, at 2,218,688 to 2,219,296 _02130 MPMX20_02131: MPMX20_02131 - putative MFS-type transporter, at 2,219,516 to 2,220,712 _02131 Position (kb) 2218 2219 2220Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 2217.696 kb on - strandat 2217.696 kb on - strandat 2217.698 kb on - strandat 2217.699 kb on - strandat 2217.699 kb on - strandat 2217.707 kb on - strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.709 kb on + strandat 2217.711 kb on + strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.715 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.717 kb on - strandat 2217.722 kb on - strandat 2217.722 kb on - strandat 2217.722 kb on - strandat 2217.732 kb on - strandat 2217.753 kb on + strandat 2217.753 kb on + strandat 2217.761 kb on - strandat 2217.761 kb on - strandat 2217.761 kb on - strandat 2217.761 kb on - strandat 2217.763 kb on + strandat 2217.764 kb on + strandat 2217.765 kb on + strandat 2217.767 kb on - strandat 2217.773 kb on - strandat 2217.773 kb on - strandat 2217.773 kb on - strandat 2217.773 kb on - strandat 2217.808 kb on + strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.816 kb on - strandat 2217.824 kb on - strand, within MPMX20_02129at 2217.829 kb on - strand, within MPMX20_02129at 2217.932 kb on + strand, within MPMX20_02129at 2217.932 kb on + strand, within MPMX20_02129at 2217.932 kb on + strand, within MPMX20_02129at 2217.940 kb on - strand, within MPMX20_02129at 2217.940 kb on - strand, within MPMX20_02129at 2217.940 kb on - strand, within MPMX20_02129at 2217.940 kb on - strand, within MPMX20_02129at 2217.945 kb on - strand, within MPMX20_02129at 2217.983 kb on - strand, within MPMX20_02129at 2218.088 kb on - strand, within MPMX20_02129at 2218.118 kb on - strand, within MPMX20_02129at 2218.153 kb on - strand, within MPMX20_02129at 2218.223 kb on - strand, within MPMX20_02129at 2218.266 kb on - strand, within MPMX20_02129at 2218.268 kb on - strand, within MPMX20_02129at 2218.283 kb on + strand, within MPMX20_02129at 2218.292 kb on - strand, within MPMX20_02129at 2218.326 kb on + strand, within MPMX20_02129at 2218.350 kb on - strand, within MPMX20_02129at 2218.357 kb on + strand, within MPMX20_02129at 2218.397 kb on + strand, within MPMX20_02129at 2218.397 kb on + strand, within MPMX20_02129at 2218.405 kb on - strand, within MPMX20_02129at 2218.405 kb on - strand, within MPMX20_02129at 2218.456 kb on + strand, within MPMX20_02129at 2218.463 kb on - strand, within MPMX20_02129at 2218.463 kb on - strand, within MPMX20_02129at 2218.488 kb on + strand, within MPMX20_02129at 2218.520 kb on - strand, within MPMX20_02129at 2218.520 kb on - strand, within MPMX20_02129at 2218.526 kb on + strand, within MPMX20_02129at 2218.530 kb on - strand, within MPMX20_02129at 2218.563 kb on + strandat 2218.571 kb on - strandat 2218.597 kb on - strandat 2218.599 kb on + strandat 2218.634 kb on + strandat 2218.718 kb on - strandat 2218.746 kb on + strandat 2218.766 kb on + strand, within MPMX20_02130at 2218.774 kb on - strand, within MPMX20_02130at 2218.774 kb on - strand, within MPMX20_02130at 2218.775 kb on - strand, within MPMX20_02130at 2218.789 kb on - strand, within MPMX20_02130at 2218.791 kb on - strand, within MPMX20_02130at 2218.837 kb on + strand, within MPMX20_02130at 2218.863 kb on - strand, within MPMX20_02130at 2218.884 kb on + strand, within MPMX20_02130at 2218.894 kb on + strand, within MPMX20_02130at 2218.930 kb on + strand, within MPMX20_02130at 2218.930 kb on + strand, within MPMX20_02130at 2218.930 kb on + strand, within MPMX20_02130at 2218.930 kb on + strand, within MPMX20_02130at 2218.936 kb on - strand, within MPMX20_02130at 2218.938 kb on - strand, within MPMX20_02130at 2218.938 kb on - strand, within MPMX20_02130at 2218.938 kb on - strand, within MPMX20_02130at 2218.938 kb on - strand, within MPMX20_02130at 2218.948 kb on + strand, within MPMX20_02130at 2219.016 kb on + strand, within MPMX20_02130at 2219.027 kb on + strand, within MPMX20_02130at 2219.027 kb on + strand, within MPMX20_02130at 2219.027 kb on + strand, within MPMX20_02130at 2219.035 kb on - strand, within MPMX20_02130at 2219.042 kb on + strand, within MPMX20_02130at 2219.078 kb on + strand, within MPMX20_02130at 2219.078 kb on + strand, within MPMX20_02130at 2219.085 kb on + strand, within MPMX20_02130at 2219.086 kb on - strand, within MPMX20_02130at 2219.128 kb on - strand, within MPMX20_02130at 2219.145 kb on + strand, within MPMX20_02130at 2219.155 kb on + strand, within MPMX20_02130at 2219.158 kb on - strand, within MPMX20_02130at 2219.158 kb on - strand, within MPMX20_02130at 2219.165 kb on + strand, within MPMX20_02130at 2219.178 kb on - strand, within MPMX20_02130at 2219.189 kb on + strand, within MPMX20_02130at 2219.191 kb on + strand, within MPMX20_02130at 2219.197 kb on - strand, within MPMX20_02130at 2219.228 kb on - strand, within MPMX20_02130at 2219.233 kb on - strand, within MPMX20_02130at 2219.242 kb on + strandat 2219.350 kb on + strandat 2219.427 kb on + strandat 2219.429 kb on + strandat 2219.437 kb on - strandat 2219.437 kb on - strandat 2219.439 kb on - strandat 2219.506 kb on + strandat 2219.506 kb on + strandat 2219.512 kb on + strandat 2219.514 kb on - strandat 2219.514 kb on - strandat 2219.546 kb on - strandat 2219.570 kb on - strandat 2219.716 kb on + strand, within MPMX20_02131at 2219.738 kb on - strand, within MPMX20_02131at 2219.740 kb on + strand, within MPMX20_02131at 2219.740 kb on + strand, within MPMX20_02131at 2219.748 kb on - strand, within MPMX20_02131at 2219.748 kb on - strand, within MPMX20_02131at 2219.748 kb on - strand, within MPMX20_02131at 2219.751 kb on + strand, within MPMX20_02131at 2219.751 kb on + strand, within MPMX20_02131at 2219.751 kb on + strand, within MPMX20_02131at 2219.761 kb on + strand, within MPMX20_02131at 2219.781 kb on - strand, within MPMX20_02131at 2219.872 kb on - strand, within MPMX20_02131at 2219.985 kb on - strand, within MPMX20_02131at 2220.020 kb on - strand, within MPMX20_02131at 2220.099 kb on - strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.151 kb on + strand, within MPMX20_02131at 2220.159 kb on - strand, within MPMX20_02131at 2220.159 kb on - strand, within MPMX20_02131at 2220.170 kb on - strand, within MPMX20_02131at 2220.195 kb on - strand, within MPMX20_02131

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075
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2,217,696 - +1.2
2,217,696 - +0.6
2,217,698 - -2.3
2,217,699 - +0.6
2,217,699 - +0.8
2,217,707 - -2.4
2,217,709 + -0.3
2,217,709 + +0.1
2,217,709 + +2.7
2,217,709 + -1.1
2,217,709 + -0.5
2,217,709 + +2.7
2,217,709 + +0.1
2,217,711 + -0.5
2,217,715 - +0.9
2,217,715 - +1.0
2,217,715 - -1.0
2,217,715 - -2.9
2,217,715 - -0.1
2,217,715 - -0.3
2,217,715 - +3.3
2,217,717 - -0.1
2,217,717 - -0.6
2,217,717 - +0.5
2,217,717 - -1.7
2,217,717 - +7.0
2,217,717 - +1.2
2,217,717 - -1.8
2,217,717 - -1.0
2,217,717 - -1.7
2,217,717 - -2.4
2,217,717 - -0.8
2,217,717 - +1.6
2,217,717 - +1.7
2,217,717 - +2.6
2,217,717 - +1.3
2,217,717 - +0.1
2,217,717 - -3.1
2,217,717 - -0.1
2,217,717 - -0.5
2,217,717 - -1.2
2,217,717 - -0.3
2,217,717 - -2.4
2,217,717 - +0.8
2,217,717 - +0.4
2,217,717 - -1.6
2,217,717 - -2.8
2,217,717 - -1.1
2,217,717 - +1.4
2,217,717 - -0.1
2,217,717 - +3.3
2,217,717 - +1.3
2,217,717 - -0.5
2,217,717 - +0.6
2,217,717 - -2.0
2,217,717 - -0.6
2,217,717 - -0.1
2,217,717 - -1.4
2,217,717 - +1.7
2,217,717 - -1.2
2,217,717 - -2.1
2,217,717 - +1.7
2,217,717 - +1.3
2,217,717 - -1.2
2,217,717 - -3.6
2,217,717 - -1.2
2,217,717 - -1.3
2,217,717 - -1.1
2,217,717 - -1.2
2,217,717 - -1.3
2,217,717 - +1.1
2,217,717 - +0.7
2,217,717 - +5.4
2,217,717 - -1.6
2,217,717 - +1.7
2,217,717 - -1.9
2,217,717 - -3.0
2,217,717 - -3.4
2,217,717 - +0.5
2,217,717 - -2.2
2,217,717 - -0.1
2,217,717 - -0.0
2,217,717 - +0.6
2,217,722 - +0.5
2,217,722 - -0.8
2,217,722 - -0.3
2,217,732 - -1.8
2,217,753 + -3.0
2,217,753 + -0.3
2,217,761 - -1.1
2,217,761 - +0.5
2,217,761 - -2.7
2,217,761 - +0.5
2,217,763 + +0.0
2,217,764 + +1.1
2,217,765 + -0.3
2,217,767 - +1.6
2,217,773 - -2.7
2,217,773 - -0.7
2,217,773 - +0.1
2,217,773 - +0.5
2,217,808 + -1.3
2,217,816 - +0.6
2,217,816 - -0.4
2,217,816 - -1.4
2,217,816 - +1.9
2,217,816 - +0.1
2,217,816 - +1.1
2,217,816 - +0.5
2,217,816 - -0.3
2,217,816 - +1.0
2,217,824 - MPMX20_02129 0.10 -0.9
2,217,829 - MPMX20_02129 0.11 +2.2
2,217,932 + MPMX20_02129 0.22 +0.5
2,217,932 + MPMX20_02129 0.22 -1.4
2,217,932 + MPMX20_02129 0.22 -2.2
2,217,940 - MPMX20_02129 0.23 -1.4
2,217,940 - MPMX20_02129 0.23 +0.4
2,217,940 - MPMX20_02129 0.23 -1.6
2,217,940 - MPMX20_02129 0.23 -0.6
2,217,945 - MPMX20_02129 0.24 +0.5
2,217,983 - MPMX20_02129 0.28 +1.1
2,218,088 - MPMX20_02129 0.39 -1.6
2,218,118 - MPMX20_02129 0.43 +0.2
2,218,153 - MPMX20_02129 0.47 +0.5
2,218,223 - MPMX20_02129 0.54 -2.6
2,218,266 - MPMX20_02129 0.59 +1.3
2,218,268 - MPMX20_02129 0.59 +0.0
2,218,283 + MPMX20_02129 0.61 +0.6
2,218,292 - MPMX20_02129 0.62 +0.6
2,218,326 + MPMX20_02129 0.66 -2.3
2,218,350 - MPMX20_02129 0.68 +1.2
2,218,357 + MPMX20_02129 0.69 -1.1
2,218,397 + MPMX20_02129 0.74 -0.5
2,218,397 + MPMX20_02129 0.74 -1.8
2,218,405 - MPMX20_02129 0.74 -2.0
2,218,405 - MPMX20_02129 0.74 +1.7
2,218,456 + MPMX20_02129 0.80 -1.4
2,218,463 - MPMX20_02129 0.81 +1.0
2,218,463 - MPMX20_02129 0.81 +0.8
2,218,488 + MPMX20_02129 0.84 +0.1
2,218,520 - MPMX20_02129 0.87 -2.5
2,218,520 - MPMX20_02129 0.87 -0.8
2,218,526 + MPMX20_02129 0.88 +0.4
2,218,530 - MPMX20_02129 0.88 -1.1
2,218,563 + -1.7
2,218,571 - -0.7
2,218,597 - -0.5
2,218,599 + -1.9
2,218,634 + +2.5
2,218,718 - -1.4
2,218,746 + -1.6
2,218,766 + MPMX20_02130 0.13 -3.4
2,218,774 - MPMX20_02130 0.14 -2.2
2,218,774 - MPMX20_02130 0.14 +1.2
2,218,775 - MPMX20_02130 0.14 +1.7
2,218,789 - MPMX20_02130 0.17 -1.4
2,218,791 - MPMX20_02130 0.17 -0.1
2,218,837 + MPMX20_02130 0.24 +0.1
2,218,863 - MPMX20_02130 0.29 -0.3
2,218,884 + MPMX20_02130 0.32 +0.3
2,218,894 + MPMX20_02130 0.34 +2.9
2,218,930 + MPMX20_02130 0.40 +0.0
2,218,930 + MPMX20_02130 0.40 -1.0
2,218,930 + MPMX20_02130 0.40 -0.7
2,218,930 + MPMX20_02130 0.40 -1.5
2,218,936 - MPMX20_02130 0.41 -0.1
2,218,938 - MPMX20_02130 0.41 -1.6
2,218,938 - MPMX20_02130 0.41 +0.7
2,218,938 - MPMX20_02130 0.41 -1.8
2,218,938 - MPMX20_02130 0.41 -1.1
2,218,948 + MPMX20_02130 0.43 -3.1
2,219,016 + MPMX20_02130 0.54 +1.4
2,219,027 + MPMX20_02130 0.56 -2.6
2,219,027 + MPMX20_02130 0.56 +0.2
2,219,027 + MPMX20_02130 0.56 -0.3
2,219,035 - MPMX20_02130 0.57 -1.8
2,219,042 + MPMX20_02130 0.58 +0.6
2,219,078 + MPMX20_02130 0.64 -1.2
2,219,078 + MPMX20_02130 0.64 -1.0
2,219,085 + MPMX20_02130 0.65 -1.4
2,219,086 - MPMX20_02130 0.65 -2.8
2,219,128 - MPMX20_02130 0.72 +0.7
2,219,145 + MPMX20_02130 0.75 +1.6
2,219,155 + MPMX20_02130 0.77 +0.4
2,219,158 - MPMX20_02130 0.77 +1.7
2,219,158 - MPMX20_02130 0.77 -1.7
2,219,165 + MPMX20_02130 0.78 -1.4
2,219,178 - MPMX20_02130 0.80 +1.1
2,219,189 + MPMX20_02130 0.82 +1.0
2,219,191 + MPMX20_02130 0.83 -1.0
2,219,197 - MPMX20_02130 0.84 +0.6
2,219,228 - MPMX20_02130 0.89 -0.6
2,219,233 - MPMX20_02130 0.89 -3.0
2,219,242 + -0.3
2,219,350 + +0.4
2,219,427 + -1.1
2,219,429 + -1.6
2,219,437 - +3.2
2,219,437 - +0.1
2,219,439 - +1.7
2,219,506 + -2.3
2,219,506 + -0.6
2,219,512 + -2.5
2,219,514 - -1.2
2,219,514 - -0.9
2,219,546 - -0.1
2,219,570 - +1.5
2,219,716 + MPMX20_02131 0.17 -1.6
2,219,738 - MPMX20_02131 0.19 +0.5
2,219,740 + MPMX20_02131 0.19 -1.3
2,219,740 + MPMX20_02131 0.19 +1.5
2,219,748 - MPMX20_02131 0.19 -1.2
2,219,748 - MPMX20_02131 0.19 +0.3
2,219,748 - MPMX20_02131 0.19 +1.3
2,219,751 + MPMX20_02131 0.20 -1.8
2,219,751 + MPMX20_02131 0.20 -2.7
2,219,751 + MPMX20_02131 0.20 -0.5
2,219,761 + MPMX20_02131 0.20 -0.3
2,219,781 - MPMX20_02131 0.22 -1.1
2,219,872 - MPMX20_02131 0.30 +2.2
2,219,985 - MPMX20_02131 0.39 -1.8
2,220,020 - MPMX20_02131 0.42 -0.1
2,220,099 - MPMX20_02131 0.49 -1.3
2,220,151 + MPMX20_02131 0.53 -0.4
2,220,151 + MPMX20_02131 0.53 -1.8
2,220,151 + MPMX20_02131 0.53 +0.3
2,220,159 - MPMX20_02131 0.54 -2.2
2,220,159 - MPMX20_02131 0.54 +1.1
2,220,170 - MPMX20_02131 0.55 +2.7
2,220,195 - MPMX20_02131 0.57 +1.8

Or see this region's nucleotide sequence