Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02486

Experiment: 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02485 and MPMX20_02486 are separated by 156 nucleotidesMPMX20_02486 and MPMX20_02487 are separated by 88 nucleotides MPMX20_02485: MPMX20_02485 - Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, at 2,624,334 to 2,625,122 _02485 MPMX20_02486: MPMX20_02486 - hypothetical protein, at 2,625,279 to 2,626,265 _02486 MPMX20_02487: MPMX20_02487 - Exoribonuclease 2, at 2,626,354 to 2,628,288 _02487 Position (kb) 2625 2626 2627Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2625.138 kb on - strandat 2625.141 kb on + strandat 2625.151 kb on + strandat 2625.183 kb on + strandat 2625.227 kb on + strandat 2625.232 kb on + strandat 2625.235 kb on - strandat 2625.240 kb on - strandat 2625.290 kb on - strandat 2625.306 kb on + strandat 2625.314 kb on - strandat 2625.318 kb on + strandat 2625.344 kb on + strandat 2625.352 kb on - strandat 2625.454 kb on - strand, within MPMX20_02486at 2625.454 kb on - strand, within MPMX20_02486at 2625.479 kb on - strand, within MPMX20_02486at 2625.496 kb on + strand, within MPMX20_02486at 2625.522 kb on + strand, within MPMX20_02486at 2625.541 kb on - strand, within MPMX20_02486at 2625.560 kb on + strand, within MPMX20_02486at 2625.560 kb on + strand, within MPMX20_02486at 2625.560 kb on + strand, within MPMX20_02486at 2625.560 kb on + strand, within MPMX20_02486at 2625.568 kb on - strand, within MPMX20_02486at 2625.568 kb on - strand, within MPMX20_02486at 2625.568 kb on - strand, within MPMX20_02486at 2625.568 kb on - strand, within MPMX20_02486at 2625.595 kb on - strand, within MPMX20_02486at 2625.619 kb on + strand, within MPMX20_02486at 2625.678 kb on + strand, within MPMX20_02486at 2625.691 kb on + strand, within MPMX20_02486at 2625.699 kb on - strand, within MPMX20_02486at 2625.747 kb on + strand, within MPMX20_02486at 2625.755 kb on - strand, within MPMX20_02486at 2625.755 kb on - strand, within MPMX20_02486at 2625.822 kb on - strand, within MPMX20_02486at 2625.837 kb on + strand, within MPMX20_02486at 2625.837 kb on + strand, within MPMX20_02486at 2625.896 kb on + strand, within MPMX20_02486at 2625.927 kb on - strand, within MPMX20_02486at 2625.929 kb on + strand, within MPMX20_02486at 2625.937 kb on - strand, within MPMX20_02486at 2625.945 kb on + strand, within MPMX20_02486at 2625.972 kb on - strand, within MPMX20_02486at 2626.010 kb on - strand, within MPMX20_02486at 2626.020 kb on - strand, within MPMX20_02486at 2626.026 kb on - strand, within MPMX20_02486at 2626.049 kb on - strand, within MPMX20_02486at 2626.131 kb on - strand, within MPMX20_02486at 2626.133 kb on + strand, within MPMX20_02486at 2626.141 kb on - strand, within MPMX20_02486at 2626.146 kb on + strand, within MPMX20_02486at 2626.172 kb on - strandat 2626.189 kb on + strandat 2626.278 kb on + strandat 2626.370 kb on - strandat 2626.448 kb on + strandat 2626.449 kb on - strandat 2626.530 kb on + strandat 2626.605 kb on - strand, within MPMX20_02487at 2626.628 kb on - strand, within MPMX20_02487at 2626.686 kb on - strand, within MPMX20_02487at 2626.800 kb on + strand, within MPMX20_02487at 2626.835 kb on + strand, within MPMX20_02487at 2626.854 kb on + strand, within MPMX20_02487at 2626.854 kb on + strand, within MPMX20_02487at 2626.862 kb on - strand, within MPMX20_02487at 2626.933 kb on + strand, within MPMX20_02487at 2627.059 kb on + strand, within MPMX20_02487at 2627.155 kb on + strand, within MPMX20_02487at 2627.160 kb on + strand, within MPMX20_02487

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090
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2,625,138 - +1.6
2,625,141 + +0.2
2,625,151 + +0.6
2,625,183 + -0.6
2,625,227 + +1.2
2,625,232 + -1.8
2,625,235 - +0.8
2,625,240 - -0.7
2,625,290 - +1.7
2,625,306 + +1.9
2,625,314 - +1.4
2,625,318 + -1.0
2,625,344 + -0.3
2,625,352 - +0.4
2,625,454 - MPMX20_02486 0.18 -0.4
2,625,454 - MPMX20_02486 0.18 -0.9
2,625,479 - MPMX20_02486 0.20 -0.8
2,625,496 + MPMX20_02486 0.22 +1.0
2,625,522 + MPMX20_02486 0.25 +0.2
2,625,541 - MPMX20_02486 0.27 +0.7
2,625,560 + MPMX20_02486 0.28 -0.8
2,625,560 + MPMX20_02486 0.28 -1.4
2,625,560 + MPMX20_02486 0.28 -0.6
2,625,560 + MPMX20_02486 0.28 +1.4
2,625,568 - MPMX20_02486 0.29 +0.2
2,625,568 - MPMX20_02486 0.29 +0.4
2,625,568 - MPMX20_02486 0.29 -2.8
2,625,568 - MPMX20_02486 0.29 +0.1
2,625,595 - MPMX20_02486 0.32 -1.3
2,625,619 + MPMX20_02486 0.34 +0.1
2,625,678 + MPMX20_02486 0.40 +1.6
2,625,691 + MPMX20_02486 0.42 -2.1
2,625,699 - MPMX20_02486 0.43 +0.7
2,625,747 + MPMX20_02486 0.47 -1.0
2,625,755 - MPMX20_02486 0.48 +1.7
2,625,755 - MPMX20_02486 0.48 -0.6
2,625,822 - MPMX20_02486 0.55 -0.3
2,625,837 + MPMX20_02486 0.57 +1.7
2,625,837 + MPMX20_02486 0.57 -2.3
2,625,896 + MPMX20_02486 0.63 +0.0
2,625,927 - MPMX20_02486 0.66 -2.5
2,625,929 + MPMX20_02486 0.66 -0.9
2,625,937 - MPMX20_02486 0.67 -3.1
2,625,945 + MPMX20_02486 0.67 +0.9
2,625,972 - MPMX20_02486 0.70 +1.6
2,626,010 - MPMX20_02486 0.74 -0.0
2,626,020 - MPMX20_02486 0.75 +4.5
2,626,026 - MPMX20_02486 0.76 +0.6
2,626,049 - MPMX20_02486 0.78 +1.3
2,626,131 - MPMX20_02486 0.86 -2.2
2,626,133 + MPMX20_02486 0.87 -0.7
2,626,141 - MPMX20_02486 0.87 -0.2
2,626,146 + MPMX20_02486 0.88 -0.0
2,626,172 - +0.2
2,626,189 + +0.9
2,626,278 + -1.1
2,626,370 - +1.3
2,626,448 + -0.4
2,626,449 - +1.4
2,626,530 + +3.6
2,626,605 - MPMX20_02487 0.13 +2.3
2,626,628 - MPMX20_02487 0.14 +2.2
2,626,686 - MPMX20_02487 0.17 +2.1
2,626,800 + MPMX20_02487 0.23 +2.0
2,626,835 + MPMX20_02487 0.25 +2.2
2,626,854 + MPMX20_02487 0.26 +1.1
2,626,854 + MPMX20_02487 0.26 +3.1
2,626,862 - MPMX20_02487 0.26 -0.3
2,626,933 + MPMX20_02487 0.30 +0.8
2,627,059 + MPMX20_02487 0.36 +4.2
2,627,155 + MPMX20_02487 0.41 +1.0
2,627,160 + MPMX20_02487 0.42 -0.4

Or see this region's nucleotide sequence