Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03316

Experiment: 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03314 and MPMX20_03315 overlap by 11 nucleotidesMPMX20_03315 and MPMX20_03316 overlap by 1 nucleotidesMPMX20_03316 and MPMX20_03317 overlap by 1 nucleotides MPMX20_03314: MPMX20_03314 - Sulfate/thiosulfate import ATP-binding protein CysA, at 3,482,943 to 3,484,037 _03314 MPMX20_03315: MPMX20_03315 - Sulfate transport system permease protein CysW, at 3,484,027 to 3,484,902 _03315 MPMX20_03316: MPMX20_03316 - Sulfate transport system permease protein CysT, at 3,484,902 to 3,485,735 _03316 MPMX20_03317: MPMX20_03317 - Thiosulfate-binding protein, at 3,485,735 to 3,486,748 _03317 Position (kb) 3484 3485 3486Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3483.994 kb on - strandat 3484.043 kb on + strandat 3484.079 kb on - strandat 3484.084 kb on + strandat 3484.086 kb on + strandat 3484.162 kb on + strand, within MPMX20_03315at 3484.163 kb on + strand, within MPMX20_03315at 3484.181 kb on + strand, within MPMX20_03315at 3484.273 kb on + strand, within MPMX20_03315at 3484.273 kb on + strand, within MPMX20_03315at 3484.281 kb on - strand, within MPMX20_03315at 3484.281 kb on - strand, within MPMX20_03315at 3484.286 kb on + strand, within MPMX20_03315at 3484.286 kb on + strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.294 kb on - strand, within MPMX20_03315at 3484.384 kb on + strand, within MPMX20_03315at 3484.400 kb on + strand, within MPMX20_03315at 3484.493 kb on - strand, within MPMX20_03315at 3484.599 kb on - strand, within MPMX20_03315at 3484.639 kb on + strand, within MPMX20_03315at 3484.748 kb on + strand, within MPMX20_03315at 3484.768 kb on + strand, within MPMX20_03315at 3484.824 kb on + strandat 3484.824 kb on + strandat 3484.832 kb on - strandat 3484.999 kb on - strand, within MPMX20_03316at 3485.029 kb on - strand, within MPMX20_03316at 3485.081 kb on - strand, within MPMX20_03316at 3485.103 kb on - strand, within MPMX20_03316at 3485.181 kb on - strand, within MPMX20_03316at 3485.319 kb on + strand, within MPMX20_03316at 3485.368 kb on - strand, within MPMX20_03316at 3485.484 kb on + strand, within MPMX20_03316at 3485.485 kb on - strand, within MPMX20_03316at 3485.501 kb on + strand, within MPMX20_03316at 3485.502 kb on + strand, within MPMX20_03316at 3485.588 kb on + strand, within MPMX20_03316at 3485.590 kb on + strand, within MPMX20_03316at 3485.590 kb on + strand, within MPMX20_03316at 3485.590 kb on + strand, within MPMX20_03316at 3485.590 kb on + strand, within MPMX20_03316at 3485.590 kb on + strand, within MPMX20_03316at 3485.598 kb on - strand, within MPMX20_03316at 3485.598 kb on - strand, within MPMX20_03316at 3485.598 kb on - strand, within MPMX20_03316at 3485.670 kb on + strandat 3485.695 kb on - strandat 3485.696 kb on - strandat 3485.696 kb on - strandat 3485.696 kb on - strandat 3485.714 kb on + strandat 3485.800 kb on + strandat 3485.808 kb on - strandat 3485.878 kb on - strand, within MPMX20_03317at 3485.926 kb on + strand, within MPMX20_03317at 3485.934 kb on - strand, within MPMX20_03317at 3485.939 kb on - strand, within MPMX20_03317at 3486.009 kb on + strand, within MPMX20_03317at 3486.009 kb on + strand, within MPMX20_03317at 3486.034 kb on - strand, within MPMX20_03317at 3486.057 kb on - strand, within MPMX20_03317at 3486.065 kb on + strand, within MPMX20_03317at 3486.073 kb on - strand, within MPMX20_03317at 3486.097 kb on + strand, within MPMX20_03317at 3486.105 kb on - strand, within MPMX20_03317at 3486.105 kb on - strand, within MPMX20_03317at 3486.105 kb on - strand, within MPMX20_03317at 3486.141 kb on - strand, within MPMX20_03317at 3486.198 kb on + strand, within MPMX20_03317at 3486.198 kb on + strand, within MPMX20_03317at 3486.206 kb on - strand, within MPMX20_03317at 3486.206 kb on - strand, within MPMX20_03317at 3486.213 kb on + strand, within MPMX20_03317at 3486.245 kb on - strand, within MPMX20_03317at 3486.265 kb on + strand, within MPMX20_03317at 3486.319 kb on + strand, within MPMX20_03317at 3486.329 kb on + strand, within MPMX20_03317at 3486.337 kb on - strand, within MPMX20_03317at 3486.384 kb on - strand, within MPMX20_03317at 3486.384 kb on - strand, within MPMX20_03317at 3486.476 kb on - strand, within MPMX20_03317at 3486.477 kb on + strand, within MPMX20_03317at 3486.487 kb on + strand, within MPMX20_03317at 3486.495 kb on - strand, within MPMX20_03317at 3486.495 kb on - strand, within MPMX20_03317at 3486.532 kb on + strand, within MPMX20_03317at 3486.570 kb on - strand, within MPMX20_03317at 3486.605 kb on - strand, within MPMX20_03317at 3486.610 kb on - strand, within MPMX20_03317at 3486.620 kb on + strand, within MPMX20_03317at 3486.626 kb on - strand, within MPMX20_03317at 3486.662 kb on + strandat 3486.678 kb on + strandat 3486.686 kb on - strandat 3486.686 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090
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3,483,994 - -0.3
3,484,043 + -1.0
3,484,079 - +0.1
3,484,084 + +0.1
3,484,086 + -0.6
3,484,162 + MPMX20_03315 0.15 -0.7
3,484,163 + MPMX20_03315 0.16 -0.5
3,484,181 + MPMX20_03315 0.18 -0.3
3,484,273 + MPMX20_03315 0.28 -1.7
3,484,273 + MPMX20_03315 0.28 +0.1
3,484,281 - MPMX20_03315 0.29 -0.7
3,484,281 - MPMX20_03315 0.29 +1.7
3,484,286 + MPMX20_03315 0.30 +3.1
3,484,286 + MPMX20_03315 0.30 -1.5
3,484,294 - MPMX20_03315 0.30 -1.7
3,484,294 - MPMX20_03315 0.30 -0.8
3,484,294 - MPMX20_03315 0.30 -0.9
3,484,384 + MPMX20_03315 0.41 -0.3
3,484,400 + MPMX20_03315 0.43 +0.1
3,484,493 - MPMX20_03315 0.53 -0.9
3,484,599 - MPMX20_03315 0.65 +0.0
3,484,639 + MPMX20_03315 0.70 -0.5
3,484,748 + MPMX20_03315 0.82 +3.1
3,484,768 + MPMX20_03315 0.85 -1.4
3,484,824 + -0.5
3,484,824 + +1.2
3,484,832 - +0.9
3,484,999 - MPMX20_03316 0.12 +1.1
3,485,029 - MPMX20_03316 0.15 -0.2
3,485,081 - MPMX20_03316 0.21 -0.6
3,485,103 - MPMX20_03316 0.24 -1.0
3,485,181 - MPMX20_03316 0.33 +0.5
3,485,319 + MPMX20_03316 0.50 +0.4
3,485,368 - MPMX20_03316 0.56 -0.2
3,485,484 + MPMX20_03316 0.70 -0.8
3,485,485 - MPMX20_03316 0.70 -1.9
3,485,501 + MPMX20_03316 0.72 +0.3
3,485,502 + MPMX20_03316 0.72 -2.0
3,485,588 + MPMX20_03316 0.82 -0.5
3,485,590 + MPMX20_03316 0.82 -1.4
3,485,590 + MPMX20_03316 0.82 -0.9
3,485,590 + MPMX20_03316 0.82 -1.0
3,485,590 + MPMX20_03316 0.82 +0.5
3,485,590 + MPMX20_03316 0.82 -0.8
3,485,598 - MPMX20_03316 0.83 -1.1
3,485,598 - MPMX20_03316 0.83 -0.5
3,485,598 - MPMX20_03316 0.83 -3.1
3,485,670 + -3.1
3,485,695 - -2.0
3,485,696 - -3.1
3,485,696 - -0.7
3,485,696 - +2.1
3,485,714 + -2.1
3,485,800 + -0.7
3,485,808 - -0.7
3,485,878 - MPMX20_03317 0.14 -1.9
3,485,926 + MPMX20_03317 0.19 +0.4
3,485,934 - MPMX20_03317 0.20 +1.4
3,485,939 - MPMX20_03317 0.20 -0.3
3,486,009 + MPMX20_03317 0.27 +0.5
3,486,009 + MPMX20_03317 0.27 -0.1
3,486,034 - MPMX20_03317 0.29 -1.2
3,486,057 - MPMX20_03317 0.32 -0.3
3,486,065 + MPMX20_03317 0.33 -0.2
3,486,073 - MPMX20_03317 0.33 +1.4
3,486,097 + MPMX20_03317 0.36 -0.4
3,486,105 - MPMX20_03317 0.36 +0.7
3,486,105 - MPMX20_03317 0.36 -2.7
3,486,105 - MPMX20_03317 0.36 -1.2
3,486,141 - MPMX20_03317 0.40 -0.2
3,486,198 + MPMX20_03317 0.46 +1.0
3,486,198 + MPMX20_03317 0.46 -1.0
3,486,206 - MPMX20_03317 0.46 +2.1
3,486,206 - MPMX20_03317 0.46 -0.8
3,486,213 + MPMX20_03317 0.47 +0.5
3,486,245 - MPMX20_03317 0.50 -0.4
3,486,265 + MPMX20_03317 0.52 +0.1
3,486,319 + MPMX20_03317 0.58 -2.0
3,486,329 + MPMX20_03317 0.59 -0.6
3,486,337 - MPMX20_03317 0.59 +0.1
3,486,384 - MPMX20_03317 0.64 -0.4
3,486,384 - MPMX20_03317 0.64 -2.1
3,486,476 - MPMX20_03317 0.73 -1.6
3,486,477 + MPMX20_03317 0.73 +0.0
3,486,487 + MPMX20_03317 0.74 +0.3
3,486,495 - MPMX20_03317 0.75 -0.5
3,486,495 - MPMX20_03317 0.75 -2.3
3,486,532 + MPMX20_03317 0.79 -0.1
3,486,570 - MPMX20_03317 0.82 -0.5
3,486,605 - MPMX20_03317 0.86 +1.3
3,486,610 - MPMX20_03317 0.86 +0.7
3,486,620 + MPMX20_03317 0.87 +0.1
3,486,626 - MPMX20_03317 0.88 -2.5
3,486,662 + +0.6
3,486,678 + +0.1
3,486,686 - -0.9
3,486,686 - +0.3

Or see this region's nucleotide sequence